KEGG   Pleuronectes platessa (European plaice): 128448520
Entry
128448520         CDS       T09923                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
pplt  Pleuronectes platessa (European plaice)
Pathway
pplt03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    128448520 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pplt03019]
    128448520 (rae1)
   03036 Chromosome and associated proteins [BR:pplt03036]
    128448520 (rae1)
Messenger RNA biogenesis [BR:pplt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     128448520 (rae1)
Chromosome and associated proteins [BR:pplt03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    128448520 (rae1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WDR55 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_Aladin WD40_RFWD3 Beta-prop_ACSF4 ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_RSE1_2nd Beta-prop_Vps41 NBCH_WD40 Beta-prop_SPT8 ExoI_SH3 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 128448520
NCBI-ProteinID: XP_053287186
LinkDB
Position
2:complement(22400651..22405981)
AA seq 369 aa
MSLFGTSSGFGTAGTGVFGNATTESHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHEGPIKSIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERSYCADVVY
PMAVVATADRGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLSTVGSDGRFSFW
DKDARTKLKTSEQLDQAITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttatttgggactagctccgggtttggaacagccgggacaggtgtctttgggaac
gcaacaacagaaagccataatcccatgaaggatgttgaagtgacttcacctccagatgac
agtatcagttgtctggctttcagtccgcccaccatgccagggaatttcctcattggagga
tcctgggccaatgatgtcaggtgctgggaggtgcaagacaatggccagacagttcccaaa
gcccaacagatgcacacaggtccagtgctggatgcatgttggagcgatgatggtagtaaa
gtgttcactgcttcctgcgacaagacagccaagatgtgggatctcaacagcaatcaagcc
atgcagatagcacagcatgaaggtccaatcaaatcaattcactggataaaagcacctaac
tacagctgtatcatgactggcagctgggacaaaacactgaagttctgggacacccgttct
ccaaatcccatgatgtctttgcagatgccagagagaagctactgtgcagatgttgtttac
cccatggcggtggttgccacagctgacagaggactgatagtgtaccagctggagaaccag
ccctcggaatttcgcagaatagactctcctcttaaacatcagcaccggtgtgttgccata
ttcaaggacaagcagaacaagcccacaggctttgccctgggaagcatcgagggtcgagtg
gccatccactacatcaaccctccaaacccagccaaagataacttcactttcaagtgccac
aggtccaatggaaccaacacaaccactccgcaggacatctacgctgtaaatgctatctcc
ttccatcctgttcatggcacactgtctactgtgggctcagacggccgcttcagcttctgg
gacaaagatgctcgcaccaagttgaagacgtccgagcagctagaccaggccattacagct
tgctgcttcaaccataatggcaacatctttgcatatgcttccagttacgactggtcgaag
ggccatgagtactacaacccccagaaaaagaattacatctttctgagaaacgctgcagag
gaactgaagcctcggaacaagaaatggtga

DBGET integrated database retrieval system