Pleuronectes platessa (European plaice): 128448529
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Entry
128448529 CDS
T09923
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pplt03016
]
128448529 (trmt13)
Enzymes [BR:
pplt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
128448529 (trmt13)
Transfer RNA biogenesis [BR:
pplt03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128448529 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
128448529
NCBI-ProteinID:
XP_053287199
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All DBs
Position
9:28164760..28169354
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AA seq
448 aa
AA seq
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MAAPELCGFFLEKKKRFCKMMVSRGRRFCGEHATMEEGNSSRRIVCPLDPKHTVSEDKLD
KHLKKCNSREKEKPVYYVENINAGSDGDECQQQVSLSGRSRTELHSLLDKLRTAASDLQC
DVEDGVMCHPALQGELNNPKNGDSAHKHLKQQSSILGHLEELGLLGGGRCFVEFGAGRGK
LSHWIHEALKTCEDLQLLLVERCSTRFKVDGKHQDVGVKFERLQVDIQHLDLSKVPLLRK
KKLPLVGVGKHLCGAATDLALRCLLDTPGLREETEPPAKRLKTSEPAAGPDTGSVSNDTG
LVSDPGPASGAVLGLAVALCCHHRCEWRHYVGQQFFLQRGLGASEFSAFCRISSWATCGL
RPTNQDATRPGGEEEEHEAAEETDAVDGFLSAAEREQVGRLCKLLIDSGRVHFLKTKGFD
SKLSRYADAQVTLENVLLTAVPSARPLT
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccggagttgtgtggtttcttcttggagaaaaagaaacggttctgtaaaatg
atggtgagccgaggaagaaggttctgtggagaacatgcgaccatggaggaaggaaacagc
agcaggagaattgtgtgtcctcttgaccccaagcacactgtgagtgaagacaaactggac
aaacacctgaagaagtgtaactccagagagaaagaaaaacctgtttattacgtcgagaac
ataaacgctggatctgatggagacgagtgtcagcagcaggtgagtctgagtggacggagc
cggacggagttacactctctgctggacaaactgaggactgcagcctcagatctgcagtgt
gacgtggaggacggcgttatgtgtcatcctgccctccagggggagcttaataacccaaag
aatggagactccgcccataaacacctgaaacagcagtcttctatcttaggtcacctagag
gagctgggtctgctggggggggggcgatgcttcgtggagtttggcgcaggtcgagggaaa
ctgtctcactggatccacgaagccctgaagacctgtgaagacctgcagctgctgctggtg
gagcgctgtagcacccgcttcaaggtggacgggaaacatcaggatgttggagttaagttt
gagaggctgcaggttgacattcaacatctggatttaagtaaagttcctctgctccggaag
aaaaagctcccattagtcggagtcggcaaacacctgtgtggagcggcgacagatctggct
ctgcgctgtttgttggacacaccaggactgagagaggagactgaaccaccagcgaaacgc
ctcaagacctcagaaccagctgctggtccagacacaggttctgtctctaatgatacagga
ctagtttctgatcctggtcctgcatctggtgctgtccttggcctggcagtggcgctgtgc
tgtcaccatcgctgtgagtggcgccactacgtgggtcagcagttcttcttgcaacgagga
ctcggagcttcagagttctccgctttctgtcgaatttccagctgggccacatgtggactc
aggccgaccaatcaggatgcaaccagaccgggaggagaggaggaggagcacgaagccgca
gaggagaccgatgctgtggacgggtttttgtcggcagctgaacgagagcaggtcggtcga
ctctgcaaacttctgatcgacagcggaagagttcacttcctcaaaactaaaggattcgac
agcaaactgagtcgctacgccgacgctcaggtgaccctggagaacgtcctgctgaccgcc
gtgccctcagcgcgacctctgacctga
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