Pleuronectes platessa (European plaice): 128448608
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Entry
128448608 CDS
T09923
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03320
PPAR signaling pathway
pplt04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128448608 (rxrgb)
03320 PPAR signaling pathway
128448608 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128448608 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pplt03310
]
128448608 (rxrgb)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
128448608 (rxrgb)
Nuclear receptors [BR:
pplt03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
128448608 (rxrgb)
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GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
128448608
NCBI-ProteinID:
XP_053287320
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All DBs
Position
9:13068435..13095199
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AA seq
465 aa
AA seq
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MWHPVASPATGGSTGREIGYGHYSTGPMSAAHNHPPPMGGMVGHPSVISSSRPLQSPMST
LGSSMNGLASPYPVITSSLGSPSVSLPSTPNMNFGPLCSPQMNSMNSVSSSEDIKPPPGL
QNLGNINYQCTSPGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDM
KECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKERGEIEVESTSSFNEEMPVDK
ILDAEVAVEPKTETYSEGSPGNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSEIPLDDQ
VILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKM
KDMQMDKTELGCLRAIVLFNPDAKGLSNPAEVEGLREKVYASLESYTKQKYPDQPGRFAK
LLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaccctgtggcgtcacctgcaactggaggaagcactgggagggagataggttat
ggtcactactctacggggccaatgagtgcggcccacaaccacccgccccccatgggtggc
atggtggggcacccgtcagtcatcagcagctccaggcccctgcagtcccccatgtccacc
ctgggctcgtcgatgaacggcctggcctcaccctaccccgtcatcacatcgtccctgggc
tctccctctgtatcgctgccgtccacgcccaacatgaactttggtcctctctgcagtcca
cagatgaactcgatgaacagcgtcagcagctcggaggacatcaagcctccgccggggctg
cagaacctggggaacatcaactaccagtgcaccagccccgggggaatgtccaagcacatc
tgtgccatctgcggggaccgctcctcagggaaacactacggtgtctacagctgtgaggga
tgcaaaggtttcttcaagaggaccgtccgaaaagacctcagctacacgtgtcgagacatg
aaggagtgcctgatcgacaagcgccagagaaaccgctgccaatactgtcgctaccagaag
tgcctggccatgggcatgaagagagaagcggtgcaggaagagaggcagcgtgggaaggag
cggggggagatcgaagtggaatctaccagcagtttcaacgaggagatgcctgttgacaag
atcctggatgctgaggtggcggtggagcccaaaacagagacgtacagcgagggtagcccc
gggaactctacgaacgaccccgtcaccaatatctgccaagcagcagacaagcagctcttc
accctggtggagtgggccaaaaggatcccgcacttctccgaaatcccgctcgacgaccag
gtcatcctactacgagcaggctggaacgagctcctcatcgcctcgttctcacatcgctca
gtcacggtaaaagacggcatcctgttggcgacgggcctccatgtccacaggagcagtgcc
cacagtgcaggagtgggctccatctttgatagagtactgacagagctggtatctaaaatg
aaagacatgcagatggataagacagagctcggctgcctgcgagccatcgtcctcttcaac
ccagatgcaaaaggtctttcaaacccagcggaggtcgaggggctgagggaaaaagtctat
gcttcgttggagtcatatactaaacagaaatacccagatcagcctggcaggtttgccaaa
ctgctgctccgcctgcccgccctccgctccatcggcctcaagtgcctggagcatctgttt
ttcttcaagctgatcggggacacgcccatcgacaccttcctgatggagatgctggaggcg
ccgcatcagatcacatga
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