Pleuronectes platessa (European plaice): 128448658
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Entry
128448658 CDS
T09923
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pplt03009
]
128448658 (ddx49)
Enzymes [BR:
pplt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128448658 (ddx49)
Ribosome biogenesis [BR:
pplt03009
]
Eukaryotic type
90S particles
Helicases
128448658 (ddx49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
128448658
NCBI-ProteinID:
XP_053287385
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All DBs
Position
9:complement(20868922..20874682)
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AA seq
479 aa
AA seq
DB search
MADFSELGLSDWLIKQCHQLGITKPTPVQENCMPPILEGRDCMGCAKTGSGKTAAFVLPV
LQKLSEDPYGIYCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIVVGGMDMVAQALELSDK
PHVVVATPGRLADHIRSSNTFSMSKIQFLIMDEADRLLEQGCTDFTKDLEVILGILPAKR
QTLLFSATLTDTLQELKGIAMNRPYFWESTSETRTVEELDQRFILTAERVKDAYLVHLIQ
TFTDEHDDWSIIVFTNTCKNCQILTMMLREFHFPTISLHSMMKQKQRFANLAKFKASVYK
ILIATDVASRGLDIPTVQVVINHNTPGLPKNYIHRVGRTARAGRNGVSITLVTQYDIHLV
NAIEEQNQTKLKEYPVEEKEVLQILTQVNVTRRRCEIKLETSDFDEKKEINKRKQLILEG
KDPDMEAKRKAELEKIRTQKRRFKQKIQESMQRQKQGQLKKKLTKTKHMEKKKAPQATA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcggacttctcggagctgggactgtcagactggctcattaaacagtgtcaccagctg
ggaatcaccaaacccactccggtgcaggagaactgtatgccacccatcctcgagggtcgg
gactgtatgggctgcgccaagactggcagtgggaagacggctgcgtttgttctcccagta
ctgcagaaactgtcggaggacccatatggtatctactgcctggtgctcactcccaccagg
gagctggcctatcagatcgctgagcagttccgagtcttggggaaacctctgggtctgaag
gactgcatcgtcgtagggggaatggacatggtggcccaggccctggagctgtccgacaag
ccgcacgtggtcgtggcgacgccgggtcgactggctgatcacatccgcagctccaacacc
ttcagcatgagcaagatccagttcttgattatggatgaggcggaccggctgttagaacag
ggctgcactgacttcaccaaagacctggaggtgatcctggggattctcccggccaaacgt
cagacgctgctgttcagcgccacgctcacagacacgctgcaggagctgaagggcatcgcc
atgaacagaccgtacttctgggagagcacatcagagacgcggacggtggaggagctggac
cagaggttcatcctcactgccgagcgggtgaaggacgcctacctggtgcacctgatccag
acgttcactgacgagcacgacgactggtccatcatcgtcttcaccaacacgtgcaagaat
tgccaaatcctcaccatgatgctgcgggaatttcactttccaacgatctccctgcactcc
atgatgaagcagaaacaacggtttgcaaacctcgccaagttcaaggccagcgtctacaaa
atcctgattgcgacagatgtggcttccaggggtttggatattccaactgtccaggtcgtc
attaaccacaacacccccggccttccaaagaactacatccacagagtcgggcgaacagca
agagcaggcaggaacggagtgtccatcactctggtgacacagtatgacatccacctagtg
aacgccatcgaagagcagaaccagacgaagctgaaggagtatcctgtggaggagaaagaa
gtcctgcagatcctcacccaggtcaacgtgaccaggcgacgctgtgaaataaaactggaa
acatccgactttgatgagaaaaaggagatcaataagcggaaacagctgatcctggaggga
aaggatccagacatggaggccaagaggaaggccgagctggagaagatcaggacacagaag
aggaggttcaaacagaaaatccaggagagcatgcagagacagaaacaaggacagctgaag
aagaaactgactaagacaaaacacatggaaaagaaaaaagctccacaggcaacagcatga
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