Pleuronectes platessa (European plaice): 128449076
Help
Entry
128449076 CDS
T09923
Symbol
cnot3a
Name
(RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128449076 (cnot3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128449076 (cnot3a)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128449076 (cnot3a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128449076 (cnot3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
128449076
NCBI-ProteinID:
XP_053288058
LinkDB
All DBs
Position
10:complement(10390975..10399008)
Genome browser
AA seq
913 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGTWLTNTIDTLNMQVDQFESEVESLLVVTKKKKGGNDKQERVEELKRQIERHRFHI
RMLETILRMLDNDSVPVDSIQKIKDDVDYYIDSSQDPDFEENEFLYDDLDLDDIPLVATS
PSGQGNLEDEMYLHSNSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSEVSESPVK
NGPPSLLSSFSSSSTSGSSSSSSLVSMASVVGGITPVPMSSSLIGSFSSAVQQHQHQSAQ
QQQQPQPPNQPLQLQQQQQQPPQTKPSVPSNNAPSPPSNPLLPPSTSPSLLACSTSSSST
PNSQPQITPGPSPASSLGLGLGFGLSKVGITGTNSANQIPGLGLVGHPTPLNTMAGLLSG
STPAPYAQAAASGGLGLSSITQSSISVESSTSIPTSGSSGVTTNGAGTGLGLLVTSPVHS
SLSGSILGLVPGQSVAPGALQVPQSTVSSTSGLVGMMGGNVGNVGVVGGVGVNAAPARPP
SGLKQNGSTSYSAAVAESATESALSTPSQSQSSQPSSLSSSTSQPMDNGPSLISSITLPP
SSPSPSFSDSTPGGGSLLNGPHSYTQATEGLKTPEPLSSLKAMAERAALGSGLDGEIPNL
HLTDRGGNDIFSSSSAAPGTPAAPQPSVSEVSIPPSLGVCPLGPTPLPKDQLYQQAMQES
AWTHMPHPSDSERIRQYLMRNPCPTLPFHHQIPPHHSDSIEFYQRLSTETLFFIFYYLEG
TKAQYLSAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGF
TFEYRYLEDRDLQ
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaacttcaaggtgagatcgacagatgtttgaaaaaagtagcggaa
ggtgtagaacagtttgaagatatctggcaaaagctccataatgcagccaatgcaaaccag
aaggaaaaatatgaggctgacctcaagaaagagattaaaaaactacagcgattgagggat
cagataaaaacatgggtggcctcaaacgaaatcaaagacaaaaggcagctagttgagaac
cgcaaacttatagagacgcaaatggagcggttcaaggtggtggaacgtgaaacaaaaaca
aaagcttactctaaagaaggcttggggctcgctcagaaagtggatccagctcagagggaa
aaggaggaaacgggaacgtggctaacaaatacgatagacactctaaacatgcaggtggat
cagtttgaaagtgaggtggaatctctgttagttgtgacgaaaaagaaaaaggggggtaat
gacaagcaagaacgtgttgaggagctcaagcggcagattgagagacatagattccacatt
cgcatgttggagaccattttacgaatgctggacaatgactctgtgccggtggattcaatc
cagaagatcaaggatgatgttgactactacatcgattcgtcccaagacccagactttgag
gagaatgagttcctctatgatgacttagacctggacgacataccattagttgcaacttct
ccgtcaggtcagggcaacttggaagatgagatgtatctccattccaacagcactcccact
tccaccacctcttcttcacccatccctccatccccagccacatgcactgctgagaactca
gaggacgataagaaaagaggacggtcgacagacagtgaagttagtgagtcgcctgtgaaa
aacggccccccatcattgctctcttccttctcgtcctcctccacctctgggtcttcgtct
tcctcctccctggtgtccatggcgagtgttgtcggaggcattactccggtgcccatgagc
agcagtctaataggaagcttcagcagtgcggtgcagcaacatcagcatcaatctgcacaa
cagcaacaacagcctcagccaccaaaccaaccgctgcaactacagcagcagcagcagcag
ccacctcagacaaaaccttctgtcccctcaaacaacgcccccagcccgcccagcaaccct
ctactcccaccatccacctctccctctctccttgcgtgtagcacatccagttcatcaacc
cccaactctcagcctcagatcacaccagggcccagtccggcatccagcttgggacttggt
cttggatttggattgagcaaagttggcataacagggaccaacagtgccaaccaaatacct
ggtttaggcctggttggccaccccactcctctcaacacaatggcagggctcctttcgggc
tccacacctgccccttacgctcaggcagcagcatcaggaggtttgggtctgagcagcatc
actcagtccagcatttcagtggagagcagcacttccatccccacctccggctccagtgga
gtcaccaccaacggggcggggacagggcttggattactagttaccagcccggttcacagc
tcactgagtgggagtattctgggtctggttcctggacaaagtgtggccccaggtgccttg
caggtgccgcagagtactgtcagctctacctctggtctagtcggcatgatgggaggaaat
gtgggaaatgtcggtgtggtcggaggagtaggggtgaatgctgctcctgcaagaccaccg
agtggactcaagcaaaatggaagcacaagttacagtgctgcagtagcagagagcgccaca
gaatcagctctgagtacaccgagccaatcacaaagcagccaaccctcatctctcagttcc
tcaaccagtcagccgatggacaatggtcccagtttaatcagctccatcacgctgcctccc
agctctccgtccccctcgttctcagacagcacaccgggaggtgggagtcttcttaatgga
ccccactcctacacacaggccactgagggcctcaagactcctgagcctctcagttctctg
aaggcgatggctgagagagcagccctgggttcaggcctggatggagagattcctaacctg
cacctgacagacagaggtgggaacgacatcttctccagttcgtctgcggcgcctggcacg
cctgctgcccctcagccgtccgtgtcggaggtcagcatccccccgtcactcggagtctgt
ccactcggccccacccctctccccaaggaccagctgtaccagcaggccatgcaggagtct
gcctggacacacatgccacacccctcagactctgagaggatcaggcaatacctgatgagg
aacccgtgtccgaccttgcccttccatcatcagataccaccgcatcactcggactccata
gagttctaccagaggctctccacagaaaccctctttttcatcttctactacctggagggc
accaaggctcagtatctgtcagccaaggctctgaagaagcagtcgtggaggtttcacacc
aagtacatgatgtggttccagaggcacgaggagcccaagacgatcacagatgagtttgaa
cagggcacttacatttactttgactacgaaaaatggggccagaggaagaaggaggggttc
accttcgagtataggtacctggaagacagggacctgcagtga
DBGET
integrated database retrieval system
