Pleuronectes platessa (European plaice): 128449294
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Entry
128449294 CDS
T09923
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pplt00535
]
128449294 (col14a1a)
Proteoglycans [BR:
pplt00535
]
Extracellular matrix (ECM) proteoglycans
Others
128449294 (col14a1a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Fn3_PBP1
FN3_DSCAM-DSCAML_C
VWA_3
Motif
Other DBs
NCBI-GeneID:
128449294
NCBI-ProteinID:
XP_053288346
LinkDB
All DBs
Position
10:15301022..15439625
Genome browser
AA seq
1892 aa
AA seq
DB search
MLSAGRIRLCLWSPLVLLALVSNFPSQAQGQVPAPRRLRFKVLSSSKLLVSWREPKGDFD
SYLFLYSSIPGGQQREIIASKSDTKVLITDYSSSRGYSVSVIAVKGSEQSTPLQGRLKAA
AQGGESDGGDGTEPQRLTESLAPPDNANEISGADQFVCHTEAIADIVILVDGSWSIGRIN
FRLVRMFLENLVNAFDVGFDKTRIGLAQYSGDPRIEWHLNAFSNKETVIDAVKNLPYKGG
NTLTGLALNYIMENCFKPESGSRLGVPKIGILITDGKSQDDVIPPAESLRNSGIELFAIG
VKNADENELRSIASEPEDTHVYNVADFNIMSSIIEGLTRTVCDQVEQQDKDIKEKQVPET
IGAPLDLVTSEVAARSFRVSWSHAPGDVEKYRVVYYPAQGGEPQEAVVDGAETSVVLQPL
SSLTEYQLAVFAVYANEGSEALRGSETTLALPRVTGLQLFDVTHSTMKARWDSVDGASGY
MVLYGPLIENGELDEKEVKVSEAVTELELDGLNSHTEYTVTVYAMYGEEASDPVTNQEST
MPLSSPSNLQFSDVSHNSAHISWDPAPQGVKGYRIMWHNTGKLVKVEVGPVSSYDLSELT
SLMEYTVAISALYDNGQSEPLTDSFTTTPVPGPLNLRSSDISTDSFQVSWDHSANDIVLY
RLSWAPFTGGDTKEVILSGSDNRYLLASLSPSTEYEVMLTAVFSDESESDTVSVIETTLT
RTTTVAATTAAVPRQAVRNLQLSDETPRSLDASWEMEDPHVESYRVSYAGLRGNHQEESV
LVPGGERRAVLEPLLSDTQYKVTVTPVYRDGQDGISVSAMGSTLPLLSPGNLRVSEEWYN
RFRVTWDPPQTPTLGYRIVYQPIYDQGPVLETTVGEDMNSMMLLNLLSGTEYSVQVTASY
PSGQSEPQLVNTKTLFLGVSGLSTYQVRSSSMCVQWQPLLRATLYRVSIQSTLNGQRQEV
SLGGGASRQCFYDLTPSSQYQISVHTQIQEMEGPSVSITDMTLPAPTLAPTEPPTTEPPP
TIPPAKEVCKEAKADLAFLVDGSWSIGDDNFLKITRFLYSTMGSLDLVGPDGTQVAIVQF
SDDARTEFQLSSYSNKEALLEAIQNIRYKGGNTKTGRAIKHVKESIFTSESGARRGVPKV
LVVLTDGRSQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDA
VKKIEEQLITFVCEAATATCPTVLMSGNTMAGFRMMEKFGLVEKEYSIIPGVSLEPGSFN
SFPCYRLHRDALVSQPTKYLHPEGLPSDYTISMMIRLLPETPEEPFALWEILNKDHKPLV
GLILDNSGKTLTFFNYDYKGDFQTVTFEESEIKKIFHGSFHKLHVTISKTSVKVVLDCSA
VGEKSITAAGNITTDGVEILGRMFRSRGIENNSAPFQLQMFDIICSTSWASRDKCCELPA
LRVEKQCPSMPHACTCSQDSKGPPGPSGPPGGPGIRGARGDRGEPGITGPHGLVGEIGTS
GPPGPPGPQGPSGLSIQGPPGATGTKGERGENGPAGQMGVPGGQGSTGRDGPPGPRGLPG
NIGTQGRQGPSGPVGAPGAPGPPGSAGSAGSQGEQGVPGTAGTKGDKGERGDVQSQAAVR
AIARQVCEQLIQSHLSRYNSVLNQIPAQSAVSIRTVPGPPGEQGRRGTPGPQGEQGSPGR
PGFPGSNGQSGRAGERGLSGEKGERGSPGVGSQGPRGPPGPPGLPGEGRTGSQGPPGRPG
NPGTNGRPGNPGGTGPAGSPGYCDQNSCLGYNFNFQPVHAPLPCCAPQTDPTYSHHPVQP
LPHAGYNPPYNNDQGGEDEEEEGEEDEEQDPYYHRVYPPQYYPQQPPPSGHDPRGYHSGP
ARSEDVELRSPGVVRRFSRDVVVMEESKEGGL
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcagcagggcggatcaggttgtgtttgtggtctccactggtgctactggcccta
gtttccaatttccccagtcaggcacagggtcaagttccagccccgaggaggctgcgcttc
aaagtgctgagctcgagcaaactccttgtttcatggagggagcccaaaggagactttgac
agctatctgttcctctacagcagtataccaggtggtcagcagagggagatcatagcgtcc
aagtcggacactaaggtgttgataacagactacagctcgtccagaggctacagtgtgagt
gtgatcgctgtcaaaggcagtgagcagagcacgcctcttcagggcagacttaaagctgca
gcccagggaggtgagagtgacggtggagacgggactgagccgcagaggctgactgaatca
ctcgctcctccagataatgccaacgagatctctggagctgatcagtttgtgtgccacacc
gaagccatcgcagacatcgtgatcctggtggacggctcctggagtatcggtcggatcaac
ttccggctcgtccgcatgttcctggaaaacctggtcaacgccttcgatgtcggcttcgat
aagacaaggataggtctggctcagtacagcggggacccgaggatagagtggcatctaaat
gctttctccaataaagagaccgtcatcgacgctgtcaagaatctgccctacaaaggagga
aacacgctcacaggccttgcgttgaactatatcatggagaactgcttcaagcctgagtct
ggctcacggcttggcgtgcccaagattggcatcctcatcacggacgggaagtcccaggat
gacgtgataccacctgcagagagcctgcgcaactctgggattgagctgtttgctatcggt
gtgaagaacgctgatgagaatgagttgcgctccatcgcctcagagccagaagacactcac
gtctacaacgtggccgacttcaacatcatgagctccatcatcgagggtctgaccaggacc
gtgtgtgatcaggtggagcagcaggataaagacatcaaggagaaacaggtaccagagacg
atcggagcgccgctcgatctggtgacatccgaggtcgcggcgcggagcttcagggtgtcg
tggagtcacgcccctggagatgtagagaaatacagagtggtttattatcccgctcaggga
ggagaaccacaggaggctgtggtggacggcgctgagacctcggtggtgttacagcctctc
agctctctcaccgagtaccagctggctgtgttcgctgtgtatgcaaacgaggggagtgaa
gctctgaggggatcagaaacaactctggctctacccagagtgacaggcttgcagctgttt
gacgtgactcacagcaccatgaaagcaagatgggacagcgtagacggggcctccggctac
atggtgctgtacggacctctcatagaaaatggagagttggacgagaaggaggtgaaggtg
tcggaggctgtgacagagctggagctggacgggttgaactctcacactgaatacaccgtc
actgtttacgccatgtacggagaggaagccagtgaccctgtaacaaaccaggaaagtaca
atgcctctgagttctcccagtaacctccagttctctgatgtcagccataactccgcccac
atcagctgggaccctgctccccaaggggtcaaaggttaccgcatcatgtggcacaataca
ggcaaactagtcaaggtggaggtcggcccagtgagctcttacgacctcagtgagctgacg
tctctgatggagtacacagtagccatttctgctttgtacgacaacggccaatcagagccg
ctcactgattcattcacgaccactccagttcccggtcctctgaacctgcgctccagtgac
atcagcacagacagcttccaggtcagctgggatcactcagccaatgacatcgtcctttac
agactctcgtgggcaccgttcacgggtggcgacaccaaagaggtgatcttgagtggaagt
gataacagatacctgctggccagcctgagtccgtccactgagtacgaagtcatgctgacg
gccgtgttcagtgatgaatcagagagcgacactgtctccgtcatagagaccacattgacc
aggacgacgacagttgctgccacaaccgcagcggtgccacgtcaggctgtgagaaacctg
cagctgagcgacgagaccccccggagtttagatgcatcatgggagatggaagacccccac
gtggagagctacagggtctcctatgctggcctcaggggcaaccaccaagaggagtcggtc
ttggttcctggaggagagaggagagctgtgctggagccgttactgtcagacacccagtac
aaagtgacggtcacgccagtgtacagagacggacaagatggcattagcgtctctgccatg
ggatccacacttccccttttgtcccctggaaacctccgtgtatcagaggagtggtacaac
cgcttccgggtcacctgggatccaccgcagactcctacactgggttacaggattgtctac
cagcccatttatgatcaaggaccagttctggagacaacagtgggtgaagatatgaactcc
atgatgcttctgaatctcttaagtgggacggaatacagtgttcaagtgacggcctcctac
ccttcaggacagagtgaaccgcagctagtgaacaccaagacattgttcctcggcgtctcc
ggcttgtcaacctaccaggtgcgttccagcagcatgtgtgtccagtggcagcctcttcta
cgggccacattatacagagtctccatccagtccacgctcaatggccaaaggcaggaagtg
agcctggggggtggtgcttcccgacagtgcttctatgacctcactccaagcagccaatac
cagatcagtgttcacacgcagattcaagaaatggaggggccgtcggtctccatcactgac
atgacgttgccagcgcccactctagctccgactgaaccaccgaccacagagccccctccc
accatcccgcctgctaaggaggtgtgcaaggaggccaaggctgacctggcgttcctggtg
gacggctcctggtccatcggagacgacaacttcctgaagatcacgcgtttcctgtacagc
accatgggatcgctggatctggtgggaccggatggcacccaggtggccatcgtgcagttc
agtgacgatgcccggacggaattccagctgagttcctatagcaacaaggaagcactgctg
gaggctattcagaacatcagatacaaaggaggaaacaccaagacaggtcgagccatcaaa
catgtgaaagagtccattttcacttcagagagcggagccagacggggcgttcccaaagtc
ctcgttgtcctcactgatgggcgatcgcaggacgatgtcaacaaagtctccaaggagatg
cagatggagggctatatcatctttgccattggctttgcggacgcggactacggagagctg
gtgaacattgccagcaagcccagcgacagacacgtctttttcgtggacgatttggatgct
gtgaagaaaatagaggaacagctcattacctttgtctgcgaggctgccactgccacttgt
ccgactgttttgatgagtggaaacacgatggcaggtttccgtatgatggagaagtttggc
ctggtggagaaggagtacagcatcatacctggtgtttctctggagccgggttcattcaac
agcttcccctgttacaggttacaccgtgacgctctggtgtcccagcccaccaagtacctt
caccctgagggtctcccctctgactacaccatttcaatgatgatccgtctacttccagag
accccagaagagccctttgcattgtgggaaatcctcaacaaagaccacaagccattagtg
ggactaatcctggacaactctggaaagaccttgacgttcttcaactacgattataaagga
gacttccagacggttacttttgaagaatcagaaatcaaaaagatcttccatggcagcttc
cacaagctccatgtgaccatcagtaagacatcggtgaaggtggtgttggattgttctgcg
gtgggggagaaatccatcaccgcagccggtaacatcaccacagacggggtggagatcctg
ggaaggatgttccggtccagaggaatagagaacaactctgctccattccagctccagatg
ttcgacatcatatgcagtacatcctgggccagcagagataagtgttgtgagctgccagca
ttaagagttgagaagcagtgcccttccatgcctcacgcttgcacctgctcccaggacagt
aaaggacctccaggaccctctggacctcctggaggtccaggtataaggggagccagagga
gacagaggagagccaggaataacgggacctcatggcttagtaggagagattggcacttct
ggacccccagggccgcctggtcctcaggggcccagtggactctccattcaggggcccccg
ggtgctacaggaacaaagggagagaggggagagaacggtccagccggacaaatgggtgtc
cctggaggccaaggctcaactggtagagacggacccccaggaccaaggggtcttccagga
aatattggaacacaaggacgacaaggaccttctggacccgttggagccccgggtgcacct
gggcctccaggatcagctggatcagccgggtcccaaggagagcaaggggttcctggtact
gctggtaccaaaggcgataagggagaaagaggagatgtgcaatcccaggctgctgtccgc
gccatcgcacgacaagtgtgtgaacagctcatccagagccatttgtctcgctataactcc
gtactgaaccagatccccgcccagtcggcggtctccatccgaacagttccaggaccacca
ggggagcagggtaggagaggcaccccggggccccagggagagcaaggatcgcccggcaga
ccaggcttccctggttccaatggtcagagtggacgagcaggagagagaggtctgtcagga
gagaagggggagagggggagtccaggtgttgggagtcagggacctcgaggaccacccgga
cctccaggcctgccgggggaaggacgcacaggcagccagggtccgcccggacggcccggc
aaccctgggacaaatgggaggccggggaatcctggtggcaccggaccagccgggtcgcca
ggatactgtgaccagaactcttgtctgggatacaacttcaattttcaacctgtgcatgct
ccccttccctgctgtgctcctcaaactgaccccacctattcccaccacccagtccaaccc
ctgcctcacgccggctacaatcccccttacaacaacgaccaaggaggcgaggacgaagag
gaggagggagaagaagatgaagagcaggacccctactaccatcgtgtttacccccctcag
tactacccccagcagcctcccccatccgggcacgatccccgcgggtaccactcgggcccc
gcccgctctgaggatgtggagctgaggtcgccgggcgtcgtgaggaggttttcacgggac
gtcgtagtcatggaggagagcaaggagggaggactttag
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integrated database retrieval system
