Pleuronectes platessa (European plaice): 128449333
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Entry
128449333 CDS
T09923
Symbol
dhx16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128449333 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pplt03041
]
128449333 (dhx16)
Enzymes [BR:
pplt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128449333 (dhx16)
Spliceosome [BR:
pplt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
128449333 (dhx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
AAA_30
Cas3-like_C_2
nSTAND3
Flavi_DEAD
PWI
Motif
Other DBs
NCBI-GeneID:
128449333
NCBI-ProteinID:
XP_053288415
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All DBs
Position
10:complement(4922417..4931864)
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AA seq
1049 aa
AA seq
DB search
MANLEQWVNDRLHDILGLSDRYVSQFMIGTARKAMNADDFVARLEQTGTIDIDPSVTAFA
RELFDKIPRKQVVEKPAREIERQCIEMDRKNRTYTLLEDSESGEETVVEKQKGKKKSKDR
GNKRKHIRKKKESESSSEEEAPKGGNAGQSVQKEVEEEEEEWEKEERERVHDIEERDAFA
QRVRLKDKDKTRNIAERTDKKAYEEAQKRLKMAEEDQNQMLPELRKQSRWEYLKKRESEK
LEDLEAEIIDDEYLFSTDELTQREKKELEYKRTLRDLAKDYKKAGAKESEERKNRYYMPE
EKRSKEVPQRDLVLEESAMELGGEQGRWEEERLKTASLSFGAKKERELGMRHEQDKYQLI
LEEEEMIDFVSTAITMKGTQADKDQEEPSLSQAEQKKQSMQEVRRSLPIFAYREDLLSAI
QQHQILVIEGETGSGKTTQIPQYLLETGYSEGGMKIGCTQPRRVAAMSVAARVAQEMGVK
LGNEVGYSIRFEDCTSERTLLKYMTDGMLLREFLTEPDLASYSVVIIDEAHERTLHTDIL
FGLIKDIARFRPDLKVLVASATLDTERFSCFFDDAPVFRIPGRRFPVDIFYTKAPEADYL
EACVVSVLQIHVTQSPGDVLVFLTGQEEIETCCELLQERCRRLGSKIAELLVLPIYANLP
SDMQAKIFSPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGMESLIVT
PCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEESTVPEIQRTNLGNVVLLLKSLGI
NDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILASE
QYKCSEEVLTIAAMLSVNNSIFYRPKDKMVHADNARMNFVVPGGDHLVLLNVYTQWMESG
FSTQWCYENFIQFRSMRRARDVREQLEGLMDRIEVEVVSSPEDSVPIRKAVTAGYFYHTS
RLSKGGYKTVKHQQTVYTHPNSSLFEELPRWLIYHELVFTTKEFMRQVIEIDSAWLLEVA
PHYYKSKELEDSSSKKMPRKQGKAKEELG
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggctaatctggagcagtgggtcaatgaccgtctccacgacatcctggggttgagtgac
agatacgtgtcccagttcatgattggcaccgcacggaaagcaatgaatgcggacgacttc
gtggctcgcctcgagcagacgggcacgatcgatatcgacccgagtgtgactgcctttgcg
cgagagctcttcgacaagattcctcgtaagcaagttgttgagaagcccgcccgggagata
gaacggcaatgcattgaaatggacaggaagaatcgcacatacacgttactggaagacagt
gaaagtggtgaagaaactgtggtggagaaacaaaaagggaaaaagaaaagtaaggacaga
ggaaacaagaggaagcacatcagaaagaagaaagagagtgagtcgtccagtgaggaggaa
gcacctaaagggggtaatgcaggccagtcggtccagaaagaagtagaagaggaggaggaa
gaatgggagaaggaagaacgagagagagtgcatgacattgaagagagagatgcatttgcc
cagcgagtgaggctgaaagacaaagacaagacccgcaatatagcggagagaactgacaaa
aaggcttacgaggaagctcagaagaggctgaagatggctgaagaggatcaaaatcaaatg
ttgccagagttgaggaagcagtctcgctgggaatatctaaagaagagagagtcagagaag
ctggaggacctggaggccgagatcattgacgacgagtacctgttctctacagacgagctg
actcagagggagaaaaaggagttggaatacaaacgcacccttcgagacctggctaaagat
tacaaaaaggccggggccaaggaaagcgaggagaggaagaacagatactacatgccggaa
gaaaagagaagcaaggaggtgcctcagagggaccttgtgctggaggaatctgccatggag
ctgggaggggagcaaggccgctgggaggaggagaggctgaagacggcctctctcagcttc
ggggcaaagaaggagcgagagctggggatgaggcatgagcaggacaagtaccagctgatc
ctggaggaggaggagatgatcgacttcgtcagcactgccattaccatgaagggaactcag
gcagataaggatcaggaggaaccgtctctgtcccaggctgagcagaagaaacagtccatg
caggaggtccgacgcagccttcccatcttcgcctacagagaggacctgctatccgccatc
caacagcaccagatcctggtcattgaaggggagacgggctctgggaaaaccacccagatc
ccacagtatctcttggaaactggctacagtgaaggaggcatgaagatcggatgcacgcag
cctcgcagagtggcagccatgtcagttgcagcccgagtcgcacaggaaatgggagtcaaa
cttgggaatgaggtgggttacagtattcgttttgaagactgcacatcagagagaacgttg
ctcaagtacatgaccgacggcatgctgctccgagagtttctcaccgagcccgacctggcc
agctacagtgtggtcatcatagatgaggcccacgagcgaactctccacacagacatcctg
ttcggtctgattaaagacatcgccaggttcagacccgacctgaaggtgctggtggccagc
gccactctggacaccgagcgcttctcctgcttcttcgacgacgcacctgtcttcaggatc
ccaggcaggaggttccccgtagatatcttctacactaaagctccagaggccgactacctg
gaagcatgtgtggtgtcagtgctacagatccacgtcacccagtctcctggagacgttctg
gtcttcctcactggacaagaggagattgaaacgtgttgcgagctgctccaggagcgatgc
aggcggctgggatctaagatagctgagctgctggtacttcccatctacgccaacctgccg
tctgacatgcaggcaaagatcttcagccccactccacccggcgcccggaaggtggtggtg
gctaccaacatagcagaaacctccttgaccatagatggcatcatctacgtcattgatcct
ggtttttgcaagcagaagagttacaatgcccgcactggcatggagtccctcattgtcacg
ccctgctcacgggcttcagccaaccagagagcaggccgtgcaggcagagtggctgctggg
aaatgtttcaggctttacacagcgtgggcctttaaacatgaaatggaggagtcaactgtg
cctgagattcagagaaccaacctgggaaacgtagtccttctgctgaagagtctgggcatc
aatgacctcattcactttgacttcatggacccacctcctcatgaaactctggtcttggcc
ctggagcagctctacgctctgggagcactcaaccacctgggagagctcaccaagctgggt
cgcaggatggctgagttacccgtggaccccatgttgagcaagatgatcctggcgtccgag
cagtacaagtgttcagaggaagtgttgacaatagccgcaatgctgtcggtgaacaactct
attttctaccggcccaaagacaagatggtgcacgccgacaacgccaggatgaacttcgtg
gtgccggggggagaccacctggtgctgctcaacgtctacacacagtggatggagagcggc
ttctccacacagtggtgctacgagaactttatccagttccgctccatgagacgagcccgg
gatgtcagggagcagctggagggcctgatggatcgcattgaggtggaggtggtctcctcc
ccggaagacagtgtgcccattcgcaaggcggtgactgcaggatatttctatcacacgtcg
agactgagcaaaggcggctacaagacggtgaagcaccagcaaacggtctacacccacccc
aacagctcgctgttcgaggagctgccccgctggctcatctaccacgagctggtcttcacc
accaaggagttcatgagacaggtgatcgagatagacagcgcatggctgcttgaggtcgct
ccccactactacaagagcaaagagctggaggacagcagcagcaagaagatgccccgtaag
caggggaaagcaaaagaggagttgggctga
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integrated database retrieval system
