Pleuronectes platessa (European plaice): 128449889
Help
Entry
128449889 CDS
T09923
Symbol
smg9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128449889 (smg9)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
128449889 (smg9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
URGCP_GTPase
DUF6079_1st
AAA_30
AAA_22
AAA_16
AAA_18
Motif
Other DBs
NCBI-GeneID:
128449889
NCBI-ProteinID:
XP_053289207
LinkDB
All DBs
Position
10:complement(14199121..14207810)
Genome browser
AA seq
508 aa
AA seq
DB search
MSESGHSQPGMYGQGRRRRRRRGDRDVGAPGQNLSGPSRDREFQPRERRDGSEDPPGPLI
QKTPIILAKPPGERAKPLANTSVSGTPVLEKPIMLMKARDDGTKTGTPSEATAQPSGTGP
SKIEREGQRPTQPVYQIQNRGMGASASSSAVDPTVGQSKLLPPEKMKHSIKLVDDQMNWC
DSAMEYLRDQTDMLVVGVIGLQGTGKSTVMSLLSANTPEEDQRSYVFRAQTQEIKERGGN
QSTGIDFFITQERVIFLDTQPMLSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQIAAFL
FTVCHVIIVVQDWFTDLNLYRFLQTAEMLKPSTPSASHDSAGSSGNDDGAEYYPHIVFLQ
NKAKRDDFCPRNLKNMHMVVDKLMAHSHLKYKGTLSMLDCNVFPGLGADYLSPEVNMFLL
PVQENDGEENLTKAGPGTYPLFSLLPGYRGHPSFSTMVSKLRSQILTMPRCQLSHTILTE
KNWFHYAARIWDGVKKSSALSEYSRLLC
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtcaggccacagtcagcccgggatgtacggacaggggcgccggaggaggcgc
cgccgaggagacagagacgtcggagccccggggcaaaacctgtccgggccgagccgggac
agagaattccaaccgagagaaagaagggatgggagtgaggatcctccaggtccactcatc
cagaagacccccatcattcttgccaagccccccggggaaagggccaagccacttgcgaat
acatctgtcagcggaactccggtcctggagaagccaatcatgctgatgaaagccagggat
gatggaacaaagacggggaccccttcagaggcgacagctcagccctctggcaccgggcca
tccaagatagagagagagggacagcgacctactcagcctgtataccagatccaaaaccga
ggaatgggtgcttctgcatccagcagcgctgtggaccccacggttggccagtccaaactc
ctccctccagagaagatgaagcacagcattaagctcgtggatgatcaaatgaactggtgt
gacagtgccatggagtatctgagggaccagacagatatgttggtggtgggagtaattggc
cttcagggaactgggaaatctacagtcatgtccctgttatctgccaacacccctgaggag
gatcaacggagttatgtattcagagcccagactcaagaaatcaaggagagaggagggaac
cagagcacagggattgacttctttatcactcaggagagagtcatcttcttggatacacag
ccaatgctcagtccatctattctggaccacctcatcaacaacgaccggaagctgccccca
gagtacaacctccctcacacatacgttgagatgcagtctcttcagatcgctgccttcctg
ttcactgtttgccatgtgatcattgtggttcaagactggttcaccgacttaaacctctac
aggtttcttcagaccgctgagatgctgaagccttccactccgtctgcaagccatgacagc
gctggctcttcaggcaatgatgatggagcagagtactatcctcatatagtgttcctccag
aataaggccaagcgagatgatttctgcccaaggaatctgaagaacatgcatatggtggtg
gataaattaatggcccactcccatctcaaatacaaaggtacattgtccatgctcgactgc
aacgtctttcctggcctgggagcggactatctgtcacctgaggtcaacatgttccttctt
cctgtgcaggagaatgatggggaggaaaatctgaccaaagcagggccagggacatacccg
ctcttttccctgctcccgggctacagaggacacccctccttctccaccatggtttctaaa
cttcgcagccaaatactgaccatgccccgctgtcagctgtcccacaccatcctaacagag
aagaactggttccactatgcagcccgtatctgggatggggtgaaaaagtcctcagcactg
tcagaatacagtcgactgctctgctaa
DBGET
integrated database retrieval system
