Pleuronectes platessa (European plaice): 128449999
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Entry
128449999 CDS
T09923
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128449999 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128449999 (rad54b)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
128449999 (rad54b)
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Paralog
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Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
128449999
NCBI-ProteinID:
XP_053289365
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All DBs
Position
10:complement(12289233..12302269)
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AA seq
934 aa
AA seq
DB search
MRRSAAPSQLFGNAGKKPRFMPPGASTSCPAALSKTLAPKLGLGNALEKVQRSLSAPAPT
KSRCDVQPKAAPAAPALSRALALVLSATESKENENNKTYPDNGSADYTEDKRTAGVSGSP
QLSPGSPQTPRPPAGSDSACSQDGARYFSVMWCKASKKKHKRWEGDAVLVTRGRSVTLKD
MEGKDIGKGTGYKVSELAALSDGETLMVGGKEVEVMGIISAEAFSKGRCFQEVQIESEVP
QTASAPPPPRRSAAKPFCPPTLAGRAEPPGTKPEQTSRPRHDAQAPGALVMPRPSPNHQW
SNNKSGLPVVDVVLDPHLTTHLRPHQRDGLLFLYECVMGMRAVGRYGAILADEMGLGKTL
QSVALAWTLLKQGPYGAKPVTKRVLVVTPGSLVQNWGAEFNKWLGRERISVFTVDQDHRI
EQFVLSPLHSVLVISYEMLLRCQEQVQKVEFGLVICDEGHRLKNSTIKTSSALSSLGCSR
RVILTGTPVQNDLQEFYALIEFVNPGILGSSMGYRKVYEEPILRSRQPSCTEEERVLGEE
RAAELSRLTGTFILRRTQEIINRYLPPRLDWTLFCDPSPLQLELYRRLLCHRVFRACLQS
STQTHTHLACITALKKLCNHPSLLYSTVKKKADHGSEESSVYDGLVDLFPESYSSGGLNT
TDSGKLLVLSDLLAAIRQLSTSDSVVVVSNYTQTLDLLQDFCVHMGYTFCRLDGHTPTNK
RQRLVDSFNSSYSQNFVFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDMQAMARVWRDG
QKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGADHTSFSTNELRDLFSLTDT
PSLTHDLLNCSCSMDGSVQAAVEEEDPVSDRRCQLGRLGGRGGGVAPLKHLSMSELMQWR
HFSGDTPTFADPYLDHARKHITFAFQTTISHTVQ
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgctcggcagcacccagccagctctttggtaatgcagggaaaaagcctcggttt
atgcctcctggggcctctacctcatgtcctgccgctttatccaagaccctggcccctaaa
cttggattaggcaatgcactggaaaaggtccagagaagtctatcagcacccgctccgact
aagtcaaggtgtgatgttcagcccaaagctgcaccggctgctccggccttgtccagggct
ctggctctcgttctcagtgcaacggagagtaaggaaaatgaaaacaacaaaacatatcct
gacaacggcagtgcagactatacagaagacaagagaacagcaggggtgagtggttctcct
cagttgagtcctggctctcctcaaaccccacggccccctgcagggtcagactctgcctgc
agtcaggatggagcgcgttacttcagtgtgatgtggtgtaaggccagtaagaagaaacat
aagcgctgggagggggatgcagtcctggtgacgagaggacgctcagtcactcttaaagac
atggaaggaaaagacatcgggaaaggtactggctacaaggtgtcagagctggccgctctt
tctgatggagaaaccctgatggttggtgggaaggaggtggaggtgatgggcatcatttct
gccgaggccttttccaagggacgctgtttccaagaggtccaaatagagagtgaggtgcca
caaacagcgtcagctcccccccctcctcgtcgctctgcagccaaacctttctgccctcca
accctggcaggaagagccgagcctccaggaactaaaccagagcaaacatcgagacctcgc
catgacgcccaagctccaggtgcactggtgatgcctcgtccctcccccaaccaccagtgg
tctaataacaagtcaggacttcctgtagttgatgttgtgcttgacccgcacctgaccact
cacctgagacctcaccagagagacggcctgctcttcctctatgagtgtgtcatgggaatg
agagctgtgggtcgctacggtgccatcctggccgatgagatgggactggggaagaccctc
cagagcgtggcactggcctggacactgctgaagcaggggccgtatggtgcgaagccagtt
actaagcgtgtccttgtggttacacctggcagccttgtgcagaactggggtgcagagttt
aacaagtggctgggccgcgagaggatcagtgttttcactgtggatcaggaccacaggata
gagcagtttgtgctgtcccctctacacagcgttctggtgatcagctatgagatgctgctg
cgctgccaagagcaggtacaaaaagtggagtttggtcttgtcatttgcgacgagggtcac
agattaaagaacagcaccatcaaaacgtcctctgctctcagtagcctcggctgtagtcgc
agggtcatactcacaggcactccagtacagaacgacctgcaggagttttatgctctcata
gagtttgtaaacccagggattctcgggtcttcgatgggatacaggaaagtgtacgaggag
ccaattctgcgctccagacaaccctcctgcacagaggaggagcgagttttaggtgaggag
cgagcagctgagctgtctcgcctgaccggcacgttcatcctgagacggacgcaggagatc
atcaataggtacctgcccccccgcctcgactggacgctgttctgtgacccatcccctctg
cagctagagctctacaggcgtctcctgtgccatcgagtcttcagagcctgtcttcagagc
tccacgcaaactcacacccacctggcctgcatcactgcactgaagaagctgtgtaaccac
cccagcctgctgtactccaccgtcaagaagaaagctgaccacggatcagaggagagttca
gtttatgacggattggtagatctcttcccagaatcctactcgtcaggaggattgaacacg
accgattcaggaaaactccttgttctgtcggacctgttggctgccatcagacagctcagc
acttcagacagcgtggtcgtagtgtccaactacactcaaacacttgacctgctccaggac
ttctgtgtgcacatgggctacaccttctgccgactagacggacacacacctaccaacaag
agacagcgactggtcgacagtttcaacagctcctactctcagaactttgtgtttctgctg
agctccaaagcaggaggtgtgggacttaatctgatcggtgcttcccatctggtgctctat
gatattgactggaaccctgccaacgatatgcaggccatggctcgagtttggcgagatggc
cagaagaagactgtgcacatctatcgtctcctcactgcaggaactattgaggagcgtata
ttccagagacaggtctccaaacaggggctttctgggactgtggtcgacctgggtaaaggc
gctgaccacaccagcttctccaccaatgaactgcgagatcttttcagcctgacggacacg
ccgtctctaactcacgaccttctgaactgcagctgcagcatggacggatcagtccaggca
gccgtagaggaagaggacccggtttctgacaggcgctgccagctcggccgtctaggtggc
cgtggagggggggtggcgccgctgaagcatctcagcatgtccgagctgatgcagtggaga
cacttctctggtgacacgcccaccttcgcagacccctacctcgaccatgcacgaaaacac
atcacattcgccttccagaccaccatctcccacacagtccagtaa
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