Pleuronectes platessa (European plaice): 128450180
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Entry
128450180 CDS
T09923
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03020
RNA polymerase
pplt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128450180 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
128450180 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pplt03021
]
128450180 (polr2b)
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128450180 (polr2b)
Enzymes [BR:
pplt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128450180 (polr2b)
Transcription machinery [BR:
pplt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
128450180 (polr2b)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
128450180 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
128450180
NCBI-ProteinID:
XP_053289678
LinkDB
All DBs
Position
2:complement(44855..54912)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDEDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTAECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAREVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIAAYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLKERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgatcaggacgaagataatcaatacgatgaagatgaagatgaaatcactccggat
ctgtggcaggaagcgtgttggatcgtcatcagctcttattttgacgagaagggtctggtg
cggcagcagctggattccttcgatgagttcatccagatgtcggttcagaggatcgtggag
gacgctccgcccatcgacctgcaggctgaagcccagcacacatcgggggaggtggaggag
ccgcctcgttacctgctgaagtttgagcagatctacctgtcgaagccgacgcactgggag
agagacggagctccgtctcccatgatgcccaacgaggcccgactacgaaacctgacgtac
tccgcccctctgtatgttgacatcacaaagaccataataaaggagggggaggagcagctg
cagacacaacaccagaaaacgttcattgggaagattcccatcatgcttcgctccacctac
tgcctgctgagtggtctgacggatcgagacctgtgtgagctcaacgagtgtccgctcgac
cccggcggctatttcatcatcaacggctccgagaaggtgctgattgctcaggagaagatg
gcgaccaacaccgtgtacgtctttgctaagaaggactcgaagtacgcgtacacggccgag
tgccgctcgtgtctggagaactcgtctcgtcccaccagcaccatctgggtcagcatgatg
gcgagaggaggacagggagtgaagaagagcgccatcggtcagaggatcgtttccacgctg
ccgtacatccgacaggaagttcccatcatcatcgtgttccgggcgctgggcttcgtgtcg
gacagagacatcctggaacacatcatctacgacttcgacgacccggagatgatggagatg
gtcaagccgtctctggacgaagcgtttgtgatccaggagcagaacgtggcgctgaacttc
atcggctccagaggagcgaagcccggagtgacgaaggagcgacgcatcaagtacgctcga
gaagttcttcagaaagagatgctgcctcacgtcggggtcagcgacttctgtgagaccaag
aaggcctacttcctggggtacatggttcaccggctgcttctcgcggctctcggccgacgg
gagctggacgacagagatcactatggcaacaagaggctggacctcgctgggcctctgctg
gcgtttctgttcagagggatgtttaagaatctgttgaaggaaatcagaatttacgctcag
aagttcatcgacagaggaaaagacttcaacctggaactcgccattaaaaccaggatcatc
tccgacggactcaagtattcactcgccactggaaactggggcgacgtgaagaaagctcat
caggccagagctggagtgtcacaggtgttgaaccgtttgacctttgcgtcgactctgtct
cacctgcgtcgagtcaactctccgatcggccgagatggaaaactggcgaaacctcgacag
ctacacaacacactctgggggatggtctgtccggccgagacgccagagggtcacgctgtg
ggtctggtgaagaacttggccctcatggcctacatctccgtgggctctcagccgtctccc
atcctggagtttctggaggagtggagtatggagaaccttgaggagatctcacctgccgcc
atcgcagatgccactaagatctttgtcaatggctgctgggtcggaatccacaaagatcct
gaacagctgatgaacacactgaggaaactccgcagacagatggacatcattgtgtccgag
gtgtcgatgatcagagacatcagagaacgtgagatcagaatctacacggacgccggacgg
atctgccggccgctgctgatcgtggagaaacagaagctgctgctgaagagacgccacatc
gaccagctgaaggaacgggagtacaacaactacagttggcaggacctggtggcgagcggc
gtggttgagtacattgacactctggaggaagagacggtgatgctcgccatgacccctgat
gacctccaggagaagggcgtggcctactgttccacctatactcactgtgagattcacccg
tccatgatcctcggagtttgtgcctccatcattccgttccccgaccacaaccagtctccc
aggaacacgtaccagtctgccatgggtaaacaggccatgggcgtgtacatcaccaacttc
cacgtccgaatggacacactggctcacgtgttgtactaccctcagaaaccactggtcacc
acccggtccatggagtacctgcgcttcagagagcttcctgcagggatcaactccatcgtg
gccattgcagcgtacacaggatacaaccaggaggactctgtgatcatgaacaggtcggcc
gtggaccgaggtttcttcaggtcggttttctatcgatcctacaaagagcaggagtcgaag
aaaggtttcgatcaggaggaaatcttcgagaagccgacccgtgaaacctgtcagggtatg
aggcacgccatctacgacaagctggatgacgatgggctgatcgcacccggcgtccgtgtg
tccggtgaggacgtgatcatcgggaagacggtgacgctgccggagaacgacgacgagctg
gacagcaccaaccggcgctacacaaagagggactgcagcaccttcctcaggaccagcgag
acgggcatcgtggaccaggtgatggtgaccctgaatcaggagggctacaagttctgcaag
atccgggtgcgctcggtccggattcctcagatcggagacaagtttgccagccgacacgga
cagaagggaacctgtgggatccagtacagacaggaggacatgccgttcacctgtgaggga
atcacacctgacatcatcatcaatcctcacgccatcccgtccagaatgacggtcggccat
ctgatcgagtgtttgcagggcaaggtgtcggcaaacaaaggtgagatcggtgacgcgacg
ccgttcaacgacgccgtgaacgtccagaaagtgtcgaacctgctgtcggagtacggatac
cacctgagaggaaatgaggttctgtataacggcttcaccgggaggaagctcacgtctcag
atcttcatcggtcccacgtactatcagcgtctcaagcacatggtggacgacaagatccac
tccagggcccggggcccggtccagatcctcaacaggcagccgatggagggacgatcccgt
gatggcggcctgcggttcggggagatggagcgtgattgtcaaatcgctcacggagcggct
cagttcctcaaagagcgtctgttcgaggcgtcggatccgtatcaagtccacgtgtgtaac
ctgtgtggactgatggccatcgccaacacacggacacacacgtacgagtgtcgaggctgc
cgcaacaagacacagatctctctggtgcggatgccgtacgcttgtaaacttcttttccaa
gagttgatgtcgatgagcatcgcccctcggatgatgacatcgtga
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integrated database retrieval system
