Pleuronectes platessa (European plaice): 128450354
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Entry
128450354 CDS
T09923
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04137
Mitophagy - animal
pplt04140
Autophagy - animal
pplt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128450354
04137 Mitophagy - animal
128450354
04148 Efferocytosis
128450354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128450354
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128450354
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Gene cluster
GFIT
Motif
Pfam:
HIF-1
PAS_11
PAS
PAS_3
DUF2632
Motif
Other DBs
NCBI-GeneID:
128450354
NCBI-ProteinID:
XP_053289740
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Position
11:17652644..17655136
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AA seq
473 aa
AA seq
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MTLLQSQCTNIHQHLQQKLLRGIEKLDIQLNRDLKALDGFLIVLSEDGDIIYLSENVNKC
LGLSQVVKFNLLFISMEGESEMHQPTTAGISPQVLHCSGHVRVYDTKTEETSNGLKEPPV
PYLVLICDPVPHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYE
YYHAMDSDHLTKSHHNCEYESYKFFLTNSIVEVEEQVEVEEAAEKGPDLDVIKLFTQASK
ARPLASLYDQLKEKPEALTLLAPAAGDTIISLDFSCPDSEMQLLKDAPLYNDVMLPSSSE
KLALPLSPLPPSEPLNTRGGFKSEESKAESYPPAPSTTITCHSSSEADSPMDFCFPMDSD
MSSDFKLDLVEKLFAIDTEPKTPFNTQAMEDLDLEMLAPYIPMDDDYQLRSLTLDEPLTS
GQVKSLKSSPVQVTQQVDSYPSSPFSGVGSSTSSPAPLEPVIVAHLATIIAKR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacattactgcagagccagtgcaccaacatacatcaacatctccagcagaaactgctg
agggggattgaaaagttggatatccagctaaaccgcgaccttaaggctctggatggcttc
ctcattgtgctgtctgaagatggagacatcatttatctctctgaaaatgtcaacaaatgc
ctcgggctgtcacaggtagttaaatttaacctgctgtttatcagcatggaaggtgagtca
gaaatgcatcagccaaccactgccggcatctctccccaggttctccactgctcaggtcat
gttcgtgtgtatgacaccaaaactgaagagacctctaacggactcaaggagccacctgtc
ccctacctggttttgatctgtgaccccgtcccccacccctccaacatcgaggtccccctg
gacaccaagacctttctcagccgccacacgatggatatgaagttcacgtattgtgatgag
aggatcactgagctcatgggttatgatccagaggaccttttgaatcgttctgtgtacgag
tactatcacgctatggactctgaccatctcaccaagtctcaccataactgtgagtatgaa
tcttacaagttttttttaacaaattccattgtggaggtggaagagcaggtggaagtggag
gaggcagcagagaaaggcccagacctggatgtgatcaaactcttcacccaggcgtccaag
gctcggccactggcgagcctgtacgaccagctgaaggaaaagcctgaggccctcaccctg
ctggccccggctgctggagacacaatcatctctctggactttagctgccctgattcagag
atgcagctgcttaaggacgcccctctctacaacgacgtcatgcttccctcctcaagtgag
aagctggctctgcctctctcccccctgccacccagcgagcctctcaacaccagaggagga
ttcaaaagtgaggaatctaaagcggagagctatcctccagctccgtccactacaataacc
tgccacagctcctcagaggctgacagtcctatggacttctgtttccctatggactcagat
atgagctcagacttcaaactagacttggtggagaagctttttgccattgacacagagccc
aagactcccttcaacacacaggcgatggaagacttggatctggagatgttagcgccctac
atccccatggacgatgactaccagctgcgcagtctgaccctagatgagcctctgacaagt
ggacaggtcaaatccctcaagagttctccagtccaagtcacacagcaagtcgacagctac
cccagctccccattcagtggagtaggaagtagcacaagttccccggcaccacttgagcct
gtaattgttgctcatctcgccaccatcatcgctaagaggtaa
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