Pleuronectes platessa (European plaice): 128450492
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Entry
128450492 CDS
T09923
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03013
Nucleocytoplasmic transport
pplt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128450492 (pnn)
03015 mRNA surveillance pathway
128450492 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128450492 (pnn)
03041 Spliceosome [BR:
pplt03041
]
128450492 (pnn)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128450492 (pnn)
Spliceosome [BR:
pplt03041
]
Complex C
Other components
EJC/TREX
128450492 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
128450492
NCBI-ProteinID:
XP_053289954
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Position
11:complement(20504941..20511590)
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AA seq
675 aa
AA seq
DB search
MAVVVRSLQDQLEKAKESLKSVDDNIRKLTGRDPNESRPGQIRRLGGPMAGVGGGRGRGI
NLLRRSLSEIGSGGPPAKQRDIEGALLRLAGDQRARRDLRHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVSTEKQKRRTEIEQK
LEVQAETEKKKVENEKKGLFEERRAKQTELRLLEQKVELAQLQEEWTSHNNHLVKYIRTK
TKPHIFYSPGKMCSATQKLLDDSTKKLNVVFEERREAFAEHLIKMESRPRRQPNRDQDGN
TAATGMDHPKEGKPAGQVVKVTGNKGDAEMEEEEEEDEEEDMGKEGDRKVMEEEMDGLKK
AAEEGERMELGEVANEEIEKEEEEEGVNGSGEQREMGIKEKSSGLEKMEVEGKQGDRRKE
EKGKPDSKQEPTDSQNEKTLDTKSFEPTKASQEAPDTSQQPQPSPSAEEPAEQPSETIGA
SPAPKPQAASTIVGQVMITPCLEVQNSAAENQASEGKSQLKTPQAQPDSQEALSTTSPAP
PKKKDSSGRGRKKEKEPKKGHSHSKSSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSKSS
SRSRDSSKRKRRPSDRGGDRKKGEDRSHHKRGGSSGGGRDSRASKERRKRSDEGRGRSSR
SEREHKDRDRKEKRR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtagtgcggagcttgcaagaccagctcgaaaaagccaaggaaagcttgaaa
agtgtagacgataatattcgcaaattaaccggacgtgatcccaatgaatcgaggccgggt
cagatccgtcggctcggcggccccatggcaggcgtcggaggaggtagaggcagaggaatc
aacctgctcaggcgcagtctctccgagataggaagcggcggccctcctgccaagcagagg
gacatcgaaggagccctgctgaggctggcgggggaccagagggccaggagagatttgcgc
cacgacagtgacgccgaggatgacgacgatgtcaaaaagccggcgttgcagtcgtctgtt
gtagctacctccaaggagcgaacacgccgagacctcattcaagatcagaccatggatgag
aggggcaaacagaggaatcggcgtatgtttggcctgttgatggggaccttgcaaaagttc
aaacaggagtcaaacgtctctacagagaagcaaaagaggcgcacagagatcgagcagaag
cttgaggttcaggctgaaacagagaaaaaaaaggtggagaatgaaaagaaggggctgttt
gaagagaggagagccaaacagactgagctgagactactggagcagaaggtcgaactagca
cagctgcaagaggagtggaccagccacaacaatcatctggtgaaatacattcgcactaag
accaagcctcacatattctattcccctgggaaaatgtgctccgcaacacagaaactcctt
gatgactccaccaagaaactaaatgttgtgtttgaggagaggcgtgaggcttttgccgaa
cacctcattaagatggaatcgcgccccaggcgacagccaaaccgtgaccaggacggcaac
actgcggcaacagggatggaccacccaaaggagggtaagccagcaggtcaggtagtcaag
gttacaggtaacaagggagatgcagagatggaggaagaggaggaggaagatgaggaggag
gatatgggaaaggagggggatagaaaggtgatggaagaggagatggatgggttgaaaaag
gcagctgaagagggagagaggatggagttaggtgaggtggctaacgaggagatagagaag
gaggaagaagaggagggagttaatggtagcggggagcagagggaaatgggaatcaaggag
aaaagttcagggttagagaagatggaggttgaggggaagcagggggacaggaggaaggaa
gagaagggaaaaccagacagtaaacaagagccaacagactcccagaatgaaaagacccta
gacaccaagtcctttgaaccaactaaagccagccaggaggcaccagacaccagtcagcag
ccccagcccagcccctctgcagaggagccagcagaacagccctctgagaccattggggca
tcgcctgccccaaaaccccaagcagcctccaccatagttgggcaagtaatgatcacccct
tgcttagaggtccagaactctgcagctgagaaccaggcttcagaagggaaatcacagctg
aaaaccccacaagcacagcccgattcccaggaggctctaagcaccaccagccctgcaccc
cccaagaagaaggatagcagtgggagggggaggaagaaggaaaaggagccgaagaagggc
cacagtcacagcaaaagctcctcctcttcctcctccggctcatcctccagtggaagctct
tcatcttcttctggatccagccgctcttcgtcgtcctcctcgtcctcttccaaaagcagc
agtcgcagccgagacagtagtaagcgcaagaggaggccatcagacagaggcggggacagg
aaaaaaggagaagacaggagtcaccataagcgaggagggagcagcggaggtggaagagac
tcgagggcatcgaaagagaggagaaagaggagtgatgaggggaggggcaggtcgtcccgg
agtgaaagggagcataaagatagagacaggaaggaaaagagacgctaa
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