Pleuronectes platessa (European plaice): 128451499
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Entry
128451499 CDS
T09923
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04137
Mitophagy - animal
pplt04140
Autophagy - animal
pplt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128451499 (hif1aa)
04137 Mitophagy - animal
128451499 (hif1aa)
04148 Efferocytosis
128451499 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128451499 (hif1aa)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128451499 (hif1aa)
SSDB
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Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
128451499
NCBI-ProteinID:
XP_053291337
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All DBs
Position
11:17629592..17642070
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AA seq
778 aa
AA seq
DB search
MDTGTVPEKKRVSSDRRKEKSRDAARSRRGKESEVFYELAQELPLPHSVSSSLDKASIMR
LTMSYLRIRKLLTSDEPVAEEETELDIHLNSSYLKALDGFLIVLSEDGDIIYLSENVNKC
LGLAQFDLTGHSVFDFTHPCDQEELRELLIHKTGSKKTKESNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRVYDTKTEETSNGLKEPPVPYLVLICDPVPHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHAMDSDHLTKSHHNLFAKGQV
STGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLILSLEQTEDE
IMVKKEQKRQEKEEKVVVESSLPDMSTTLLKEEEEEVEEVEVEEQVEVEEAAEKGPELDV
IKLFTQASNSRPLASLYDQLKEKPEALTLLAPAAGDTIISLDFSCPDSEMQLLKDAPLYN
DVMLPSSSEKLALPLSPLPPSEPLNTRGGFKSEESKAESYPPAPSTTITCHSSSEADSPM
DFCFPMDSDMSSDFKLDLVEKLFAIDTEPKTPFNTQAMEDLDLEMLAPYIPMDDDYQLRS
LTLDEPLTSGQVKSLKSSPVQVTQQVDSYPSSPFSGVGSSTSSPAPLAPVIVAHLATIIA
KRTPQFDKEVSLRTLAAQNAQRKRKLGDLKDMFGQGNLLEEQLVQGKKLKAAESGKTTTT
FLLSSDLATCLLGSTSDVTRPLFLPQLTRYDCEVNAPLPGRQYLLQGEELLRALDHVN
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaactgtacccgaaaagaaaagagtgagctcggaccggaggaaggagaag
tccagggatgctgcgcgaagccggcgcgggaaggagtcggaggtgttctacgagctggcc
caggagctgcccctaccccacagtgtcagctccagcctggacaaggcctccatcatgagg
ctcaccatgagctatctgcgcataaggaagcttctcacctctgatgagccagttgcagaa
gaggaaacagagctggatatccatctaaacagctcctaccttaaggctctggatggcttc
ctcattgtgctgtctgaagatggagacatcatttatctctctgagaatgtcaacaaatgc
ctcgggctggcacagtttgacctgactggacacagcgtgttcgacttcacacatccctgt
gaccaggaggagctgcgggagttgctcatccacaaaacaggctccaaaaagaccaaggag
tcaaacacagagcgcagcttcttcctccgaatgaaatgcactctgacgagcaggggccgc
actgtcaacgtcaagtcagctacatggaaggttctccactgctcaggtcatgttcgtgtg
tatgacaccaaaactgaagagacctctaacggactcaaggagccacctgtcccctacctg
gttttgatctgtgaccccgtcccccacccctccaacatcgaggtccccctggacaccaag
acctttctcagccgccacacgatggacatgaagttcacgtattgtgatgagaggatcact
gagctcatgggttatgatccagaggaccttttgaatcgttctgtgtacgagtactatcac
gctatggactctgaccatctcaccaagtctcaccataacttgtttgcaaagggccaggtc
agcacaggacaataccggatgttggctaagagaggaggctttgtgtgggtggaaacccaa
gccactgtcatctacaacaacaagaactcccaaccacagtgtgttgtctgtgtcaacttt
gtgctcagtggtatccaggaggagaaactgatcttgtctctggagcagactgaggatgag
ataatggtgaagaaggagcagaagcgacaggagaaggaagaaaaggttgtagtggagagc
agcctgcctgacatgtcaacaaccttgctgaaggaggaggaagaagaggtcgaggaggtg
gaggtggaagagcaggtggaggtggaggaggcagcagagaaaggcccagagctggatgtg
atcaaactcttcacccaggcgtccaattctcggccactggcgagcctgtacgaccagctg
aaggaaaagcctgaggccctcaccctgctggccccggctgctggagacacaatcatctcc
ctggactttagctgccctgattcagagatgcagctgcttaaggacgcccctctctacaac
gatgtcatgcttccctcctcaagtgagaagctggctctgcctctctcccccctgccaccc
agcgagcctctcaacaccagaggaggattcaaaagtgaggaatctaaagctgagagctat
cctccagctccgtccactacaataacctgccacagctcctcagaggctgacagtcctatg
gacttctgtttccctatggactcagatatgagctcagacttcaaactagacttggtggag
aagctttttgccattgacacagagcccaagactcccttcaacacacaggcgatggaagac
ttggatctggagatgttagcgccctacatccccatggacgatgactaccagctgcgcagt
ctgaccctagatgagcctctgacaagtggacaggtcaaatccctcaagagttctccagtc
caagtcacacagcaagtcgacagctaccccagctccccattcagtggagtaggaagtagc
acaagttccccggcaccacttgcgcctgtaattgttgctcatctcgccaccatcatcgct
aagaggaccccacagttcgacaaagaagtctcactcaggactctggcggctcagaacgca
cagcgcaaaagaaaactgggagacttaaaggacatgtttggacaaggaaatttgctggag
gaacaactggtgcagggcaaaaagctgaaagccgcagagtcaggaaaaaccaccaccacc
ttcctgctgtcttcagacttggctacttgtctgctgggcagcacgtcagatgtcaccagg
cctctcttcctgccgcagctcacccgctacgactgtgaggtcaacgcccccctgccgggc
cgtcagtacctgctgcagggggaggagctgctgcgcgcactggaccacgtcaactga
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