Pleuronectes platessa (European plaice): 128452397
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Entry
128452397 CDS
T09923
Symbol
nisch
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pplt04990
]
128452397 (nisch)
Domain-containing proteins not elsewhere classified [BR:
pplt04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
128452397 (nisch)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_NISCH_C
PX
LRR_4
LRR_8
LRR_9
PH_PLEKHM2
LRR_NXF1-5
PH_S11IP_C
DUF5580
LRR_LRWD1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
128452397
NCBI-ProteinID:
XP_053291498
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All DBs
Position
2:complement(4256719..4273364)
Genome browser
AA seq
1523 aa
AA seq
DB search
MESGSFPQELPQRQVCVVGSELVENYTVYIIEVMDRDHRWTVKHRYSDFHDLHEKLAAEK
KVDRRLLPPKKILGKNSKSLVERRQKELELYLQTLLQQFPQSTPTPLASFLHFHLYEING
ITAALAEELFHKGEQLLQAGEVFSLHPLQLYSVTQQLRLAKPTCCNGDAKTDLGHILDFT
CRLRYLKISGTSGPVGTSNIQENSLPFDLSVFKSLLQIEISQCSSQQIQGLSSLRSSLVT
MSIHHCSETMMSILVPEASEFSQWEPEGAESGCPVTAVIPVWNDLTTLDMSHNSISTIDS
SVKLIRQVEFLDLSHNQLTSVENLQHLYNLVHVDLSYNSLRVLEDAHTRLGNIKTLSLAG
NQLERLTGLTKLYSLVNLDLSHNQLAQLEEIRNICSLPCLEKLNLSSNPMCIIPDYRTKV
LAQFGDRAAEVCLDSNVTTEKELDTVEVLKAIQKAKEVKDRMSSSDKKISEETRLSAAAP
PYLSSSYPPSSSSSSSCCSSALAPPAVTSSSSSSSSTSASSCPAQQVACPSQEVTIREEA
PVSPSVPPPVDAAPPPESFHTNTHLPSDEPTQVTRQHPAVCLTEHTNCGAPSSITSTTTT
TSTTTTTTTAAAAATAGSVCCLCSSSSSRQVEISCATCSATWCPLLPSHLLSLSSNKDFT
THLSQCLSATLKEEKKKRNEQEERKDVTGSQCREVQSQEESTDVGSSSPGSGDGYFEMGL
DDSVEELVCSSSMSLTVPSAEEPGSLPGELCAEEQEEMHISRVLWCYCLQVEEEVEQREA
CLVLTDRLLGILHLSNSFSWTNQDADLEQNPPVKEVLSSLQVDFLLPYSSLLLSSRGELP
DCCLALGLRSGPTRWYVFSEAEELRQTRTELTALMQAADSNTDPEPPNSPQLLPRSLLNS
WEIEESQGAQGGYPAHLLPTSSSSDSSTDTQSLPLDILSQRDEPSLPSLLFLTHRNLWVL
KMDFRELAERERSNADLNPSSSSSSSWCRLVRVPLSSVMLHPRERAPQFGGRTSYTSCLG
PNHHQRKSHSVELLLGNQRLLLLFPLSQDRSSFLGELSQQRGSLEGLKLLALAQTCPHQG
EHTHERCRSRDQCCCSRKSHNSSSWDSSHLQLEENQPSPHLITGLSPGLKLLVGLRGQQL
LAFFHKYIALSETEEVRQVLWLSVVLYKSPEAELTCCLLLSNDTIYFLLEDSASSLGHHS
VLEITDSGDPDVCLCCCLSIRLSELLSVNVGLFDQYFRVVGHSADHIVCCLSRDSYGTGV
FLQELMSALSLQQQLPPPEPSDQDFYSQFTNTNTGKMQNYELVHSSRVKFIYPSEEEMGD
LTFIVAERKTQGSASPSSSRSFNVLLYLLVFQVQIPSSLPTQGSTLSGASSTSGSALSPV
LQPRTLILTSTDVFLLDEDYISHPLPDFAKEPPSRERYQLREARRIRDLDRVLLGYQTYP
QALTLVFDDLPGPDLLCHLTMDHFAAGGEEALTRGGGAGGGAEGEVQWCVFVPGADSRER
LISLLARQWEALCSRELPVELTG
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgggtctttcccccaggagctgccgcagagacaagtgtgtgtcgtcggctcg
gagctggtggagaactacactgtttacatcattgaggtgatggatagagatcacagatgg
actgtgaagcaccgttacagtgacttccacgacctgcacgagaaactggcggcagaaaag
aaggttgaccgacggctccttcctcccaaaaagattttgggaaagaactcaaagagtctg
gtggagcggcgtcagaaggagctggagctgtacctgcagacgctgctgcagcagttccca
caatccacgcccactccgctcgcctccttccttcactttcacctttatgaaatcaacggc
atcacagcagcactggctgaggagctgtttcataaaggtgagcagctgctgcaggctggc
gaggtattttctctccatcctctgcagctttactccgtcactcagcagctgcgtctggcc
aaaccaacctgctgcaatggagacgccaaaaccgacctgggacacatcctcgacttcacg
tgcaggctgcgatacctcaagatctctggtaccagtggtccagttggaaccagtaacatc
caggagaacagtctccccttcgacctgtctgttttcaagtcattgctgcagattgagatc
agtcagtgcagctcgcagcagattcaaggtttatcttctctgaggtcgagtctggtgacc
atgagtatccaccactgctcggagacaatgatgtcgatcctggtcccggaggcgagcgag
ttctcgcagtgggagcctgagggggcggagtctggttgtcccgtcactgctgttatccct
gtgtggaacgacctgaccacgctggacatgagccacaacagcatcagcaccatcgatagc
tcagtgaaactgattcgacaggtggagtttctggatctgagtcataatcagctgacctca
gtggaaaatctccagcacctgtacaacctggtccacgtggatctgtcctataacagcctg
cgggtccttgaggatgctcacacccgtctgggaaacataaagaccctcagcctggctgga
aaccaactggagcggctcaccggcctcaccaagctctactctctggtcaacctggacctc
agccacaaccaactcgcccagttggaggagattaggaacatctgctctctgccctgtctg
gagaaactgaacctgtccagtaatcccatgtgcatcatcccagactacagaaccaaagtc
ctggcccagtttggagacagagcagcagaggtttgtctggacagtaacgtgacgacagag
aaggagctggacacagtggaagtgttgaaagccattcagaaagccaaagaagtcaaagac
aggatgagcagcagcgacaagaagatcagtgaggagaccaggctgtctgctgctgcacct
ccttacctctcctcctcctatcccccctcctcctcctcctcctcctcctgctgctcctct
gctctcgctcctcctgctgtcacctcctcttcctcctcttcctcttccacttccgcctct
tcctgtccggcccagcaggttgcctgccccagccaagaagtgacgataagagaagaagct
ccagtttcccccagtgttccccctcctgtggacgctgcacctccccccgaaagctttcac
accaacacacacctcccgtctgatgaacccacccaggtcactagacaacacccggctgtc
tgtctgactgaacacacaaactgtggcgctccgtcaagtattacttccactaccactact
accagtactactactactactactaccgctgctgctgctgctactgctggttctgtctgc
tgcctctgctcctcttcctcctcccgacaagttgaaattagttgcgcgacgtgcagcgcc
acctggtgtcctctgcttccttctcacttgctctccctctcctccaacaaagacttcact
actcacctctctcagtgtctcagtgcaaccctgaaagaggagaagaagaagagaaatgag
caggaggagaggaaggatgtgacagggtctcaatgcagagaggttcagtcccaagaggag
agcacagatgtgggcagttccagtcccggctctggggacggatactttgagatgggtctg
gatgactctgtggaagagttggtctgctcctcctctatgtcgctcactgttccttctgca
gaggagcccggcagcctcccgggggagctgtgtgcagaggagcaggaggagatgcacatc
agtagggttctgtggtgctactgccttcaggtagaggaggaggtggagcagagggaggcg
tgcctggtgctgacagaccgactgttgggaatactgcacctatcaaatagtttctcgtgg
accaatcaggacgcagacctagagcagaatccacctgtgaaggaggtgctgtcgagcctg
caggtggacttcctcctgccgtactcctcgctcctcctgtcctcccgaggcgagctccct
gactgctgcctggccttggggctccggtccggtccaacccgctggtacgttttctccgag
gctgaggagctccggcagaccaggaccgagctgacggcgctgatgcaggctgcagactcc
aacactgacccagagcccccaaattctcctcagctcctcccccgttcgctcctcaactcc
tgggagatagaggagagtcagggggcccagggaggctaccctgcccacctccttcccacc
tcatcctcctccgactcttccaccgacacgcaatccctcccgttggacatcctgtcccag
agagacgaacctagcctcccttctctcctcttcctcacccaccgcaacctctgggttctg
aagatggacttcagagagttggcagagagagaaaggagcaacgctgacctcaatccctcc
tcctcctcttcctcctcctggtgcagactagtccgtgtgcccctcagctcagtgatgctt
catcccagagagagagctcctcagttcgggggcagaaccagctacacctcctgcctcggc
ccaaaccaccaccagaggaagagtcacagcgtggagctgctgctggggaatcagaggctg
ctgctgctcttccctctgtcccaggacaggagctccttcttgggggagctgagccagcag
agaggctctctggaggggctcaaattgttggccctggcacaaacctgtccacaccaagga
gaacatacacatgaacgatgcagatcgagagaccagtgctgttgtagcaggaaatcacac
aactccagcagctgggactcctctcatctccagctggaggagaaccagccgtcccctcac
ctcatcacaggtctctccccaggactaaagctcctggttggcctcagaggacagcagctg
ctggccttcttccacaaatatatagcactgtctgagacggaggaggtgagacaggtcttg
tggctgtctgtggttctctacaagtctccagaggctgagctcacttgctgtctgctgctc
tccaatgacacaatctacttcctgttggaagactccgcctccagcctcggtcatcactca
gtgttggagataacagactctggagatccagatgtatgtctgtgctgctgtctgtccatc
agactttctgagctgctgtctgtcaatgtgggacttttcgaccagtacttcagggttgta
ggtcattcagccgatcacatcgtgtgctgtctcagcagagacagttatgggacgggcgtc
tttcttcaggagctgatgtcagctctcagtctgcagcagcagcttcctcctccagagcca
tcggatcaggacttctactcccagttcaccaacacaaacacaggtaagatgcagaactat
gagctggtccacagcagccgggtgaagttcatttaccccagtgaggaggagatgggagac
ctgaccttcattgtggcagagaggaagactcagggcagtgcatcgccttcatcatcacgc
tcctttaatgtcctgctctatcttctggttttccaggtccagattcccagcagtcttccc
acccaaggctccaccctttcaggggcctcctccacctcaggctcagccctgtctcccgtt
ctccagcccaggaccctgatcctgaccagcaccgacgtgttcctactggacgaggactac
atcagccatcctctgcctgacttcgcaaaagaacctccctccagggagcggtaccagctg
cgtgaggcccgaaggatccgggacctggaccgcgtcctgctgggctaccagacctaccct
caggctctgaccctggtgttcgatgacctgcccggtcctgacctgctctgccatctcacc
atggaccattttgcggcaggaggggaagaagccctgacccgaggcggcggagctggcggg
ggggccgagggtgaggtccagtggtgcgtcttcgtcccaggagccgacagcagagagagg
ctgatctcgctactcgctcgccagtgggaggctctgtgcagccgggaacttcctgtggag
ctcaccggctga
DBGET
integrated database retrieval system