Pleuronectes platessa (European plaice): 128453088
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Entry
128453088 CDS
T09923
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128453088 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128453088 (gbf1)
Membrane trafficking [BR:
pplt04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
128453088 (gbf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
Motif
Other DBs
NCBI-GeneID:
128453088
NCBI-ProteinID:
XP_053291722
LinkDB
All DBs
Position
12:3466969..3556160
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AA seq
1878 aa
AA seq
DB search
MVDKNIYIVQGEIGTVVGAIKRNSRWNTHTPLDEEQDPLLNSFGHLKEILNSITELSDIE
PNIFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLLDANHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSDLLRKS
AEHTLVDMVQLLYSRLPQFKEEAKSYVGANIKKLKMRAGGMSESSKWKKQKRSPKQPRHM
VRSPSGQMDPAQSSTLSNNNLSGGAPFIEQGLSSLPATDSAGSSISSPTTTDSGLDTCSK
ATSREDLSDLEQCSLSANNLGPEPSSPDAHSEGSRVERSQSASVESIPEVLQDKDSITER
SDSTSVHDMDYVNPRGVRFTQSTQRDGMDIEGASLIPYGLPCLRELFRFLISLTNPHDRH
NTDAMMHMGLQLLTVALESGNMANYQSLLGLVKDELCRHLFQLLSVDRMNLYASSIRVCF
LLFESMRLHLKFQLEMYLKKMMDIITSENVKMPYEMKEMALEALVQLWRIPSLVTELYIN
YDCDFYCSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEANCQAKVLNNTA
QQEQSETLLAEGESFGHSGPDSTTDLNRLDNTNGLSVPQAPSAPVCPPTSGHLMAETMKL
GRQDQGDNDDAAEKRAPKKPQRFSSFLPDSQELMEIRRKKKLLITGSEQFNQKPKKGIQF
LQEKGLLSSPMDNNQVAQWLRENPRLDKKMIGEYISDRKNMDLLDSFVNTFTFQGLRIDE
ALRLYLEAFRLPGEAPVIHRLMETFTDNWHKVNGSPFMTNDAGFALAYAVIMLNTDQHNN
NVRKQNIPMTVEQFKKNLKGVNGDKDFDQDMLEDIYNAIKNEEIVMPDEQAGLVKENYVW
SVLLHRGATPEGFFLHLPPGSYDHDLFTMTWGPTIAALSYVFDKSLDDSIIQKAITGFRK
CAMIAAHYGFSDVFDNLIISLCKFTTLTNESVENLPTVFGSNSKAQTAAKTVFDLAHRHG
NILREGWKNIMDSMLQLFRAELLPKAMVEVEDFLEPNGKISLQREETPSNRGESAVLSFV
NWLTLSGAEQSGLRGPSTENQEAKQAAILCIKQCDPEKLITESKFLQLESLQELMKALIS
VTPDEETYDEEDAAFCLEMLLRIVLENRDRVSFVWQTVRDHLCHLCVHANESCFLVERAV
VGLLRLAIRLLRREDISSQVLHSLRLLLMMKPHVLSRVSREVAYGLHELLKTNAANIHCT
DDWYTLFSLLECIGAGVKPPASFQLSSTTNDNDTGALSDSELTSHHPSEVSLDRGYTSDS
EVYTEHSKTRMSRSTTDVDVASSGWLVVGKDDLDLSKTPPLSTKAQLNHPLVNQYSLTLG
QDLGQHDTKSLMKCVETLSFIVRDAAHVTPDNFELCVRAIRVFVEASLNGGYRNHDKKKS
HKYNPKSRLMKKAGGREKEGAGGTRRGGSRASSQRPSRSHSDEEEDEGVPASYHTVSLQV
SQDLLDLMHTLHTRAASIYSSWAEEQRHLQAAGRKIEADSQTLWTSCWCPLLQGIAWLCC
DARRQVRMQALTYLQRALLVHDLQTLDATEWESCFNKVLFPLLTKLLDNISPADVGGMEE
TRMRGCTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDRYMHAGSSDLLLEAIPESLKNM
LLVMDTAGIFQSADSRTGYSDLWEITWERIICFLPNLREELFKQTVIPEPVPSPPSSPAG
RPPSPQTSLPPAQPPSPVPVSPAETQTPSRPASPQESQSTSATSKSSDMTSLLQGADRSS
AVPASNSPLPVPLTTSPTQTHSPLSQSPLILQPLASALQVGVPPMSLPIILNPALIEASS
PVPLLTSPRPMSPADQVK
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagaatatctacatcgtccagggagaaattggcactgttgttggggctatc
aagaggaactccagatggaatactcatactcccctggatgaagaacaggacccgttactc
aacagctttggacacctcaaagaaatcctcaacagcattacagagctgtcagatattgaa
cccaacatattcctgaggcctttcctggaagtggtccgctctgaggacaccactggacca
atcacaggacttgcccttacctctgtcaataagttcctttcctacggcctcctcgatgca
aaccatgaagcggcagcagaggccattgagaacatggcagatgccgtcacacatgctaga
tttgtgggaacagaccctgccagtgatgaagtcgtcctcatgaaaattctacaggtcctg
aggactctgctgctgacaccagtcggggcccatctgaccaacgagtcggtttgtgagatc
atgcagtcctgcttcaggatttgctttgaaatgcgccttagtgaccttctcaggaaatca
gctgaacatacactggttgacatggtgcagctactttactccagactcccacaattcaaa
gaagaggccaagagttatgttggtgccaacataaaaaagttgaagatgcgtgccggtgga
atgagtgagtcgtccaaatggaagaagcagaagcgctcgccgaagcagccgcgacacatg
gttcgaagtccctccggtcagatggacccagcccagtccagcaccctcagcaacaacaac
ctttcaggtggcgctcccttcattgagcagggcctgtctagcttaccagccacagacagt
gctggctcatccatttccagccctacaaccacagacagtggactggacacctgctccaaa
gccacctccagagaagacttgtctgacctggaacaatgcagcttgtctgcaaacaaccta
ggccctgagcccagctctccagatgcacactcggagggcagtcgggttgaacgatctcag
tcggcctcagtggagtctatccctgaggttcttcaggacaaagactctattacagagcgg
tccgacagtacctctgttcatgatatggattatgtcaacccccgaggagtccgtttcaca
cagtccacacaaagagatggtatggatattgaaggagcatccctcattccttatggcctc
ccatgtctaagggagctttttcgcttcctgatctcactgacaaacccccatgaccgccac
aacactgacgcaatgatgcacatgggcctgcagctgctgactgttgcacttgagtcagga
aacatggctaactatcagtcgttactaggtctagtcaaagatgagctctgcagacatctc
ttccagttgctgagtgttgaccgtatgaacctctacgcttcttccatacgagtttgcttc
ttgcttttcgaaagcatgagattacatctcaagtttcagctcgagatgtaccttaagaaa
atgatggacatcatcacatcagagaacgttaagatgccatatgagatgaaggagatggct
ctggaggctctggtgcagctgtggaggatccccagcttggtcaccgagctgtacattaac
tatgactgtgacttttactgctccaatctgtttgaagacctcactaaactgctgtccaag
aatgcgttcccagtgtcagggcagctctacacaacgcacctcctgtcgctggaggctctc
ctcactgtgattgacagcactgaggctaactgtcaggctaaagtgctcaacaacactgct
caacaagagcagtcagaaacactgctggcagagggagaaagtttcggccatagtggacca
gacagtacaactgatcttaacagacttgacaataccaatggtttgagtgttccacaagct
ccgagtgcaccagtatgtccaccaaccagtggtcatctgatggcagagacgatgaaactg
ggcagacaggaccaaggcgacaatgatgatgcagctgagaagagagcaccaaagaagcct
cagcgtttctcatcatttttacccgattcacaagagttgatggaaattagaagaaagaaa
aagctgctgatcacaggctcagagcagttcaaccagaagcccaagaagggaattcagttc
ctgcaggagaaaggcctcctcagtagcccaatggacaacaaccaggtggcgcagtggctc
agagaaaacccccgactggacaaaaagatgattggagagtacatcagtgaccgcaagaac
atggacctcctggacagctttgtgaacacgttcaccttccagggacttcgtattgatgag
gccctgcgtctctacctggaggcctttagattacctggagaggctccagtcatccataga
ctcatggaaaccttcacagacaactggcataaagtgaacggctccccattcatgaccaac
gatgcaggctttgccttggcctatgctgtcataatgttgaacactgaccagcataataac
aatgtccgcaagcagaacatcccaatgactgtagagcaattcaagaaaaatcttaaggga
gtaaatggagacaaagactttgaccaggacatgttggaggacatctacaacgctatcaag
aatgaagagattgtgatgccagatgagcaggcaggtttagtgaaggagaactacgtgtgg
agcgtgttgctacaccgcggtgccacacctgagggttttttccttcacttgccacctggc
agctacgaccatgacttgttcaccatgacctggggtcccaccattgctgccctctcctac
gtctttgacaagagcctggacgacagcatcatccagaaggccatcactggcttcaggaaa
tgtgcaatgatcgctgctcactatggcttcagtgatgtttttgacaatttgatcatctcc
ctgtgcaagttcactactctgaccaatgagtctgtggaaaacctcccgacagtgtttggc
agcaacagtaaggcgcagacagcagccaagaccgtgtttgacctcgcccatcggcacggc
aacatcctgagggagggttggaagaacatcatggactccatgctgcagctgttcagagcc
gagctgctgcccaaagccatggtcgaggtggaggatttcctggagccaaacgggaaaatt
tcacttcagagagaggaaacgccatccaatcgtggtgagtctgcagtgttgagctttgtg
aactggctgacgctgagtggagccgagcagtcaggcctcagaggcccttccacagaaaac
caggaagctaagcaggccgccatcctctgcataaagcaatgtgacccagaaaagctgatc
acagagagtaaattcctacagttggagtcactacaggagctaatgaaggctctgatatca
gtcaccccagatgaagagacctatgatgaagaggatgcagccttctgcctggagatgttg
ctgcgtattgttttggagaatcgggaccgggtgtcctttgtgtggcagacagtgcgtgac
cacctctgccacctctgcgtccacgccaacgagagctgcttcctagtggagagggccgtg
gtgggactcctgcgactagctatccgcctgctccgacgagaagacattagctctcaggtt
ctccactccctgcgtctactgcttatgatgaaacctcatgtgttgtcccgggtaagcagg
gaggtggcatacggccttcatgagctactgaagaccaacgcagccaacatccactgtaca
gacgactggtacacgctcttctccctgctggagtgcatcggagctggagtgaaacctccg
gcttcctttcagctctcctccaccactaatgacaatgacacaggcgccctgtcagatagc
gaactgacctctcatcatcccagtgaagtgagtttagaccggggctacacgtctgactct
gaggtttatactgagcatagcaaaaccagaatgtctcgctccaccactgatgtggatgta
gccagcagcggatggcttgtggttgggaaagatgacctggacttaagtaagacccctcct
ttgagcaccaaagcccagctaaatcacccactggtcaaccagtacagcctgacgctgggt
caagacctgggccagcacgacacaaagtctctcatgaaatgtgtggaaacactgtccttc
atcgtccgagatgctgcccacgtcaccccggataattttgagctgtgtgtccgagctata
cgagtgtttgtggaggccagcctcaatggaggttaccgcaatcacgacaaaaagaagagc
cacaagtacaaccccaagtcgcggctgatgaagaaggcaggcgggagggaaaaggagggt
gcaggcggcacaaggcgcggtggcagccgagcatccagccagcgtccatcccgttcccac
agcgatgaggaggaggacgagggggtcccagccagttaccacacggtgtcattacaggtt
agtcaggacctgttagacctgatgcacacgctgcacacccgggctgccagcatttacagc
tcctgggccgaggaacagcgtcacctgcaggccgcgggcagaaaaatcgaggccgactcc
cagactctgtggaccagctgctggtgtccgctgctgcagggtatcgcttggctgtgctgc
gatgccaggcgacaggttcgtatgcaggccctcacctacctccagagggcactgcttgtt
cacgatcttcagacactcgatgccactgagtgggagtcctgcttcaataaggtgctattc
cccttgttgactaagctgcttgacaacataagcccagcagatgtgggtggtatggaggag
accagaatgagaggctgcactctcctgtcaaaggttttcctccagcacctgtctcctctg
ctgtccctgcctacctttgctgccctgtggctcaccatcctggacttcatggacaggtac
atgcacgcaggctccagtgacttactgctggaggccattcctgagtctctgaagaacatg
ctgctggtgatggatactgcaggaatctttcaaagtgctgactccaggacaggatactcc
gacctgtgggaaatcacctgggaacgtatcatctgcttcctgcctaacctgagggaggag
ctctttaaacagactgtcataccagaaccagtacccagtccgccttcatctccagcaggt
cggcctccatcccctcagacgtctctaccacctgcccagccgccctccccagtcccagtg
tcacctgcagagacacagacacccagcaggccagcatcaccccaggagtctcagtcaacc
agtgccaccagtaaatccagtgacatgacatcactcttgcaaggagcagaccgatcatct
gcagtcccagcctccaactcccccctgccagtgccgttaactacgtcccccacccagacc
cactcacccttaagccagtcaccgctcatcctgcagccccttgcctctgccctacaggtg
ggagtcccgcccatgtccctgccaatcatcctgaaccccgccctcatcgaggccagctct
cccgtaccgttgctgacctcgcccagacccatgagccctgctgaccaggtcaagtaa
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