Pleuronectes platessa (European plaice): 128453414
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Entry
128453414 CDS
T09923
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
128453414 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pplt04040
]
128453414 (kcnma1a)
Ion channels [BR:
pplt04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
128453414 (kcnma1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
128453414
NCBI-ProteinID:
XP_053292280
LinkDB
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Position
12:17034339..17167828
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AA seq
1336 aa
AA seq
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MLAEANGPVPHGSDSSMRTSNINSNILNRDSSILISKMEDVVIPFSSEVPCDNNGQRMWW
AFLASSMVTFFGGLFIILLWRTLKYMWTVCCHCNIKPKEAQKVINPASHQSADKGIKGPD
EKEEVPMSEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESC
QNFYKDFTLQVDMTFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNR
SWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGD
PWENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPE
IIELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNI
SPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNI
MRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQ
GLSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTICELCYVKL
KLLLIAIEYKSEQRESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHD
DITDPKRIKKCGCKRLIYSKMSVYKRMKLACCFDCGRSEQDCSCMSGSVHSNMDTLQRAY
PLSSVSVHDCATTLRASKYKYNGYVRSPADGATTPGNSGGQKEAGVRFKADCNLVEDEHP
STLSPKKKQRNGGMRNSPNCSPKMMSRHDPLLIPGNDQIENMDMNVKRYDSTGMFHWCPS
KEIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHYHELKPIVFV
GSLDYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIEDASLQD
KECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDSSPVHGFVRQASVTTGSNIP
IITELAKPGKPLPLVSLSQEKKSGTHKQMITELVNDSNVQFLDQDDDDDPDTELYLTQPF
ACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALLAEENALRGGYSTPQTL
ANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHISTTTQCT
KRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIPAS
NRQNRSSKTRETRDKQNATRMNRMGQEKKWFTDEPENAYPRNIQIKPMSTHMANQVNQYK
STSSLIPPIREVEDEC
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgctagcggaggcaaatggccccgtcccccatggaagcgacagctctatgaggacaagc
aatatcaatagtaatattctgaaccgggactcctcgatcctaatctccaagatggaagac
gttgtcatcccgttctcgtccgaggtgccctgcgacaataatggccagcgcatgtggtgg
gcattcctcgcctcgtccatggtgacgttcttcggggggctcttcatcatcctgctgtgg
aggaccctcaagtacatgtggactgtctgctgccactgcaacatcaaacccaaggaggct
cagaaggtgatcaaccccgccagtcatcagtcagcagacaaggggatcaagggccctgat
gagaaggaggaagtaccgatgagcgaggtgggatggatgacctcggtcaaagactgggcc
ggcgtcatgatctcggctcagacgctcactggcagagtcctggtggtgttggtctttgca
ctcagcattggggcccttggaatatacttcatagactcttcagatcctatagaatcctgc
cagaacttctacaaagacttcacgctacaggtcgatatgacctttaacgtcttcttcctc
ctctactttggcctgcggttcatagcagccaacgataagctgtggttctggctggaggtg
aactccgtggtcgacttcttcactgttcctcctgtgtttgtctccgtctacttaaacaga
agctggctcggtttacgattcttgagggcactgagattgatacagttctctgaaatctta
cagtttctgaatatcttaaaaacaagcaattccatcaagctggttaacctgtgctccatc
ttcatcagcacatggctcacagctgcaggattcatacatttggtggaaaactcgggggat
ccttgggaaaacttccaaaattcccagtcactttcctactgggaatgtgtctacttgctg
atggtaaccatgtccacggttggctacggggacgtctatgcaaaaaccaccttggggcgt
ctgttcatggtcttcttcatcctcggtggattggccatgtttgccagctacgtccctgaa
atcatagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatggg
agaaagcacattgtggtgtgtggtcatattaccctcgaaagtgtctcaaacttcctcaaa
gacttcctacacaaggacagggatgatgtgaatgtcgaaatagtttttcttcataatatt
tcccctaatcttgagctggaagccttgttcaaacgccattttacccaagtcgagttctac
cagggatctgttctcaaccctcacgatttggcccgtgtgaagatcgagtcagcagatgcc
tgtttgatcctggccaataaatactgcgcagatcctgatgcagaagacgcctcaaacatc
atgagggtcatttcaatcaagaactatcatcccaagatcagaataatcacgcagatgctc
cagtatcacaacaaggcccatctgctgaacattccgagttggaactggaaggagggtgac
gatgcaatctgcctggcggagctgaaggcaggcttcattgcccagagctgtctagctcag
ggcctctccaccatgctcgccaacttgttctcgatgaggtccttcattgagattgaggag
gacacatggcaaaagtattatcttgaaggcgtggctaatgagatgtacactgagtatttg
tccagtgcctttgtgggcctctcgttccccaccatctgtgagctgtgttacgtgaaactg
aagctgttactcattgccatcgaatacaagtcggagcaaagagaaagcagaagccgaaag
cgcatcctcatcaacccgggcaaccacgtcaagatgcaggagggaacactggggttcttt
atcgccagtgacgccaaagaagtgaagagagctttcttctactgtaaagcttgtcacgat
gacatcacagacccaaagcggatcaagaagtgtggctgcaaacgactgatttattccaag
atgtccgtctacaaacgaatgaaactggcatgttgttttgattgcggccgttcagagcaa
gactgctcttgcatgtcaggcagtgtacatagtaacatggacacccttcagagggcctac
ccactttcctctgtctctgttcatgattgcgcaaccactttacgtgcctccaaatataag
tataatggatatgtcagatcaccagcagatggcgctacaacaccagggaacagtggaggt
caaaaagaggctggcgttcgattcaaagccgattgcaatttagttgaagacgagcatccg
tcgacgctctcgcccaaaaaaaagcagcgcaacggagggatgagaaactcgcccaactgc
tcgcccaagatgatgagtcgacacgacccccttctgattcctggaaatgaccaaatcgag
aacatggacatgaacgtgaagaggtatgattcgacagggatgtttcactggtgcccgtct
aaggagatcgaaaaagtcatcctgacccggagtgaagcctccatgacggtgctgagcggc
catgtagtggtctgtatatttggggatgtcacgtccgctttggtggggctgcgaaacttg
gtgatgcctttaagagccagcaacttccattaccacgagctgaagcccatagtgtttgtg
ggctcgctggattacctgcgaagagagtgggaaactttacacaacttccccaaggtctcc
atcttacctggtacaccattaagtcgggcggatttaagggctgtcaacatcaacctctgc
gacatgtgtgtaatcctgtcagccaatcagaacaatatcgaagacgcctcactgcaggat
aaggaatgcatcttggcatcgctcaacatcaaatctatgcagtttgatgacagcatcggg
gtcttacaggctaattcccaaggtttcacgcctcctggaatggaccggtcatctccagac
agcagtccagtacatggcttcgtgcgtcaggcttccgtcaccaccggatccaacatcccc
atcatcacagaactagctaaacctggcaaaccactgccattggtttccctcagtcaggaa
aaaaagagtggaacccacaaacaaatgataacagagctggtgaacgactcaaacgttcag
ttcctggaccaagatgatgatgatgacccagacacagagctgtacctcactcagcccttc
gcctgcggcacagccttcgctgtcagtgtgctcgactccctgatgagcgctacatatttc
aacgacaacattctcacacttatccggacgctggtcacagggggagccacaccagagctg
gaggctcttctggctgaggagaacgctctcagaggcggctacagcacgccgcagacgctg
gccaacagagacaggtgtcgcgtcgcccagctagccctgtacgacgggccgtttgctgac
ttgggggatggtggttgctacggagacttattctgtaaagcactgaagacctacaacatg
ctgtgtttcggaatctacagattaagagatgcacatatcagtacaacaacccagtgtaca
aaacgatatgtgatcacaaacccaccatacgagtttgagctggtgcccacagacctgatc
ttctgcctcatgcagttcgaccacaacgcaggccagtcgcggacaagcctctcccactct
tcccactcttcccattcctccagcaaaaagagctcctccgtccactccatcccagcgtcc
aaccggcagaaccgcagcagtaagacccgggagacccgcgacaaacagaatgcaacaagg
atgaatagaatgggccaagaaaagaaatggtttacagatgaaccagaaaacgcctaccca
cggaacattcagatcaagcccatgagcactcacatggccaaccaagtcaaccaatacaaa
tccaccagtagtctgattccaccaatcagagaggtcgaagatgaatgctga
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