Pleuronectes platessa (European plaice): 128453672
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Entry
128453672 CDS
T09923
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128453672 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pplt04812
]
128453672 (spast)
Enzymes [BR:
pplt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
128453672 (spast)
Membrane trafficking [BR:
pplt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
128453672 (spast)
Cytoskeleton proteins [BR:
pplt04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
128453672 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
AAA_lid_3
AAA_22
RuvB_N
TIP49
MIT
AAA_5
AAA_16
AAA_14
Mg_chelatase
IstB_IS21
NPHP3_N
AAA_24
AAA_2
nSTAND3
AAA_19
DNA_pol3_a_NII
AAA_33
Motif
Other DBs
NCBI-GeneID:
128453672
NCBI-ProteinID:
XP_053292671
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All DBs
Position
12:complement(10660688..10665825)
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AA seq
513 aa
AA seq
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MSAKINASKSKDCGEVIKNYHKQAFENISKALRIDEDDTGEKEEAVQWYKKGIAELEKGI
AVEITLPAGDQYDRAKRLQDKMVNNLTMANDRLALLEATLASKWRYEPKKPSNHVLQQPK
PVPKSQPGVSTNTRPSTAVRPPARSTDTKGSSHFNNSARLSTGKSHTKQVPKTLSCRCTI
GSAPPKVTPRPGRAQNGKPTAGKQPPKGDLKNFKNVDSKLANLILNEIVDRGASVSFEDI
AGQDLAKQALQEIVILPALRPELFTGLRSPARGLLVFGPPGNGKTMLAKAVAAESKATFF
NISAATLTSKYVGEGEKLVRALFAVARELQPSVIFIDEVDSLLCERREGEHDASRRLKTE
FLIEFDGVQSGGDDRVLVMGATNRPQELDEAVLRRFAKRIYVALPDEQTRLTLLKNLLGK
HGNPLSKNELSFLSKQTAGYSGSDLTSLAKDAALGPIRELGPDQVRCMAANEMRNIKIKD
FEDSLKRIKPSVSPTSLNMYIEWNKDFGDTTAF
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccaaaataaacgcaagtaagagcaaggactgcggcgaagttattaaaaactac
cacaagcaggcgtttgaaaacatatcgaaggctctacggatcgacgaggatgatacaggt
gagaaggaggaggcagtgcagtggtacaagaaaggcattgccgagctagaaaaggggatc
gctgtggagatcacgctaccagcaggagatcagtatgaccgagcaaagagactacaagat
aaaatggtcaacaatctgaccatggcaaacgacaggctcgctttgttagaggcaacgctg
gcgtctaagtggagatatgaacccaagaagccctctaatcatgtgcttcaacagccaaag
cctgttcctaaaagccagcctggggtgtccactaacaccaggccctccactgctgtcaga
cccccggctagatctactgacacaaagggaagtagccattttaataacagtgcgcggctc
tcaacgggcaaatctcacactaaacaggttcccaaaacactatcgtgcaggtgcaccatt
ggctcggcaccgcccaaggtgaccccacggccgggaagagctcaaaatggaaaacccaca
gccgggaaacagccaccaaagggggatttgaagaactttaagaacgtggacagcaaactg
gccaacctgattctcaatgaaattgttgaccgcggagcgtctgtatcctttgaagacatc
gcgggacaggatctggccaagcaagcactccaagagatcgtcatcctacctgccttaaga
ccagagctctttactggcctgagatctccggcacgtggtttgcttgtatttggcccacct
ggaaatgggaaaaccatgttggccaaagcagtcgcagctgagtcaaaagccacattcttc
aacatcagtgctgccactttgacctccaaatatgtgggagaaggcgagaagcttgttcga
gcactttttgcagttgccagagaattacagccctccgtcatctttattgatgaagtggac
agcttgctttgtgaacggcgggaaggagaacacgatgcctctcgtcgattaaaaaccgag
ttcctcattgagtttgacggggtgcagtcaggaggggatgatagggttcttgtaatggga
gcaaccaataggcctcaggagctcgatgaagcagtgctacggcgatttgcaaagaggatc
tatgtggcactgccagatgaacagacaagattgacgctgctgaaaaatcttttgggaaag
catgggaatcctctgagcaaaaatgagctgtcctttctttcaaaacaaactgcaggatat
tcaggcagtgatctgacgtcattagccaaagacgctgctctcgggccgattagagagttg
ggaccagaccaagtccgatgtatggctgcgaacgagatgcgaaacatcaagataaaagac
tttgaggattccctaaagcgcatcaaacccagtgttagcccaaccagtcttaacatgtat
attgaatggaacaaagattttggcgacacaacagctttttga
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