Pleuronectes platessa (European plaice): 128454005
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Entry
128454005 CDS
T09923
Symbol
irf4a
Name
(RefSeq) interferon regulatory factor 4a
KO
K09445
interferon regulatory factor 4
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128454005 (irf4a)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
128454005 (irf4a)
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GFIT
Motif
Pfam:
IRF-3
IRF
CSNKA2IP
Motif
Other DBs
NCBI-GeneID:
128454005
NCBI-ProteinID:
XP_053293104
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Position
13:complement(9532753..9541956)
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AA seq
465 aa
AA seq
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MNLDEDNGLTVSCGNGKLRQWLIDQIDSRSYIGLVWENDEKTIFRIPWKHAGKQDYNREE
DAALFKAWALFKGKFKEGVDKPDPPTWKTRLRCALNKSNDFDELVARSQLDISEPYKVYR
IIPEEAKKGMKMNSMEETTSHVNSLSYIPQYGSLHNQVPGYMVSQERREWRDYSPAEQQA
LAPPHHHGPHAELQYGHYPSPVSRGWPGSHAENGFQLSFHTHFAESQPPVYTMEHNNAIT
DFSLHVSLFYRESLVKEVTTTSLDGCRITSSSSSSSSSSSSSSSSPSSPCPEDKLHSGAE
IILFPFPYPESQRQGAEMLPNVLERGVLLWMMPDGLYAKRLCQGRVYWEGPLAPYLDKPN
KLEKEQPCKLFDTQQFLIELQDFALNGRHLPRHQVVLCFGDEYPDPHRQRKMIRAQVEPV
FARKLVYYYQQNNGHFLRGYDHVQEHATSLTIDYPSQRPLQHIQD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggatgaggacaacggcctgactgtcagctgtggcaacggcaaactgagacag
tggctgatcgaccagatcgacagcaggagttatatcggattggtttgggaaaacgacgaa
aagacaatctttcggattccgtggaaacatgcagggaagcaagattataacagagaggag
gatgctgcgctcttcaaggcatgggcactgttcaaaggaaaatttaaggagggtgtggac
aagccagatccccccacgtggaaaactaggctacgctgtgcgctcaacaaaagcaacgac
ttcgatgagttggtagcaagaagccaactggacatctcagagccctacaaagtctacaga
atcatcccagaggaagccaaaaaaggaatgaagatgaacagtatggaggagacgacatca
catgtgaattcccttagctatattcctcagtatggctccctgcataaccaggtgcctggc
tacatggtttctcaggagaggagggagtggagggattactcgccagccgaacaacaagcc
ctcgctcctccacatcaccacgggccacatgcagagctgcagtacggccactacccgtca
cctgtcagccgcggttggcccgggtcacatgcagaaaatggttttcagctctccttccac
acgcactttgcagagtcgcaaccccccgtgtatacaatggagcacaacaatgccataaca
gatttcagcctgcatgtgtccctgttctacagagagtctctggtgaaggaagtgaccacc
accagcctggacggttgtcggatcacctcttcttcctcctcctcttcctcctcctcctcg
tcatcctcttcctccccctcttctccatgccctgaggacaaacttcacagcggggccgaa
atcatccttttcccgttcccataccccgagtcccagaggcagggtgctgagatgcttcct
aacgtactggagaggggggtgctgctgtggatgatgcccgatgggctgtacgcaaagcgc
ctgtgtcagggacgggtgtattgggagggacccctggctccatatctggataaacccaac
aagctggagaaggagcagccgtgcaagctgtttgacacccagcaattccttattgagctt
caagattttgcccttaatggccgacatcttccgagacaccaggttgtgctatgttttggg
gacgagtatcctgacccacatcggcaaagaaagatgatcagagcacaggtggaaccagtg
tttgccagaaaactggtttactattaccagcagaacaacggccacttcctgcgaggctac
gatcacgtccaggaacacgccacatccctaacaatcgactatccttcgcaaagacctcta
cagcacattcaggactga
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