Pleuronectes platessa (European plaice): 128454036
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Entry
128454036 CDS
T09923
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
128454036 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128454036 (depdc5)
Membrane trafficking [BR:
pplt04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
128454036 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
128454036
NCBI-ProteinID:
XP_053293159
LinkDB
All DBs
Position
13:25493891..25533202
Genome browser
AA seq
1618 aa
AA seq
DB search
MKTNKSYKLVLHKKGFAGSDDELVVNPKVFPLVSLGDILEIAHPTDEYSPLLLQVKSLKE
DLQKETISVDQTVAQAFKLRAYQDVIVNIVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVTTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTLYNAKSIDEFPEILRC
SIRQDHEGRFYEDFYRVVAQNERRDEWTSLLVTIKKLFIQYSVLVRLKEADGFPVGYNST
AAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRLTSGDSCVGDDYNLPHWINHSFYTSKSLNSCSSFT
PRIKLAGHKIHAEKFKSSKDHTLCAPKDSDNSLPIQVDYDAYDAQVFRLPAPSRIQRSTN
FSDNVSFRMGRDKEMSGRKSWGSVDVSAGIGASPPIRSGGPEEKRSLASDDSLGPVSTML
LIPRMPPAQYEVSSSLGYTSTRELLEKMMDSQRDSSAPGRFTVGSAESTLHIRPGGYTPQ
RALINPFTPSRMPMRLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSQQRDPAHT
SAELLELAYHEATGRQTTSRQAGEGLYIGGGMDEITGSPGSNNSGTLSNHGSYFEDFSLL
SADPSLLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQALQNDYTEGCYDLLP
HSDLERREDESPVMSASQVFEEFICQRLMQGYQIIVQPNNRKPQPAVATPLGSSPLYSRG
LVSLRRAEEEETVYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESAQIQYSYSLCPPHSD
AQFVSCWVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVA
DGEGHWDIYGEGASARVGGSGDWLLLDGFVRFLEGLNRIRRRHRSDRIIRPKGTPMKGLQ
ITSPLPLYPPEPVVPQGKKGTSALSALLEMDQNQKTLEEQQQQQQMKPSAAVSDPTTAAT
APTHIDSPRKDAAFILDFIRSPRSSYIYHSQLPAEVNEVADKVVQLGVTGGATQPAGETA
ASSSIDTSGQSATGVVSLSSSSPPLEILEGIKHPTTGVQLLPEQKGLPLNCFISAEVVHW
LVNNVDGVDTQALAVDKMQKMLDEGLVTHASGEAMRTFVYGFYFYRIVGEKDGPISQLSP
TAPGVWSTAALEDFALFQRKWFEVAFVSEEQQPCDLPTFLLPWLPSRQASYASRHSSFSR
SFGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRTEWCSCYYHGNFSLTAAFEIKLHWMA
VTAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALTSYLYGDPLRAQLFIPLNIQCLLKNG
SDKLFEGIEAIRLNAMCVIVDYYLCVVTSLTGFEPETYWERMQLFQEAILYRFGFVHDKF
SASAFNFPSENKPQYIHVTGTLFLQLPYSKRKYSSGQQRRRRNSTTSNSHGPFGSEEQVG
YYWAYNTMLTKAWRTGLLGDERLSDRLLRDFTDFCSNKDSRLLNFWDSCQDKMNTSAP
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaacaagtcatataagcttgtgctgcacaagaaaggttttgctggaagtgat
gatgagttggttgtcaacccaaaagttttccctctagtcagtcttggggatatacttgag
attgcacaccccacagatgaatacagtcctctcctgctgcaagtgaagagccttaaagag
gatttacagaaagagacaatcagtgtggaccagactgtagcacaagcctttaaactccgt
gcataccaggatgtcattgttaacattgtcgacccaaaggatgtaacactcgacttggtg
gagctgactttcaaggaccagtacattggcagaggagatatgtggagactaaagaagagc
ctggtcaccacatgtgcttatgtgacacagaaagtggagtttgcaggaatcagagcccag
gccagtgaactctgggtaaaaggagagaaagtgacctgtggttacatcagtgaagacacc
agggtggtgttcagatccacatctgcaatggtgtacatcttcatccaaatgagctgtgag
atgtgggactttgacatctatggtgatctctactttgaaaaggctgtaaatggtttcctg
tctgacctttttgccaagtggaaggagaagaactgtagtcatgaggtgacagtcgttctt
ttctcacgtacactctacaatgctaaaagtatagatgaatttccagagatcttgagatgc
tcgatcaggcaggatcatgagggacgcttttatgaagacttctatagggttgtggctcag
aatgagaggcgggatgagtggacatctttactggtcactattaagaagcttttcatccag
tattctgtcctggtgcgactgaaagaagcagatggttttcctgtgggttataactcaact
gctgctcagggaaactacctggaggccattaacttgtccttcaacgtatttgacaagcac
tacatcaaccgaaactttgaccgcaccggacaaatgtcagttgttattacacctggggta
ggagtgtttgaagtggaccgtctactgatgattctcaccaaacagagaatgattgacaac
ggtattggggtagacttggtgtgtatgggggaacagcctttgcacgcagtaccattgttc
aagctgcacaataggttgacctctggagactcttgtgtgggagatgactataatctgccc
cactggatcaaccacagcttctacacctccaaaagtctgaactcttgtagctccttcacc
cctcgaatcaaactggctggtcacaagattcatgctgaaaaattcaagagcagcaaagac
cacacactctgtgctccaaaggactctgataacagcctgcctatacaggtggattatgat
gcctatgacgctcaggtgttcagacttcctgctccttcgagaattcagagaagcaccaac
ttcagtgacaatgtgtctttcaggatgggtcgagacaaagagatgagtgggaggaagagc
tggggctctgtggacgtcagtgcaggcataggggcgtcccctcccatacgctctgggggt
cctgaggaaaagcgtagcctggcctctgatgatagtctaggcccagtgtccacaatgctg
ctgatacctcgcatgcctccagcacaatatgaagtcagcagttctcttggatacacaagc
accagggagttgttggagaagatgatggactctcagcgagactccagtgccccgggcagg
ttcacagtgggaagtgcggagtcgacgctgcacatccgtccaggaggttacaccccacaa
agggctctgataaaccccttcacaccatccaggatgcccatgaggctcacctctaaccgc
cggcgctggatgcacacattccctgtcggtccttctggagaggccatccagatccatcac
cagaccagacaaaacatggctgagctgcagggcagccagcagagagatcctgcccacacc
tccgccgagctgctggagctggcatatcacgaggccactggaaggcaaacaacatctaga
caagcaggagagggcctttacattggtggagggatggatgagatcactggaagcccaggg
agcaataacagtggaactttatctaaccatggctcctactttgaagacttttccctcctc
agtgccgatccaagcctgctgctgtctgcacccccgacagtgcccagcttctgctgtaca
gtgggggtagactggaagtctctgacaacaccggcctgcctgcccctcaccaccgattac
ttccccgaccgccaggcactacagaacgactacaccgagggctgctacgaccttctgccg
cacagtgacctagagaggcgggaggatgaatcgccagtgatgagtgcgtctcaggtattt
gaggagtttatctgtcagaggttgatgcagggctaccagatcattgtccagcccaataac
agaaagccccagcctgctgtagccacgcctcttggcagcagccctctttactctagaggg
ctggtgtctctgcgtcgggcggaggaggaggagacagtgtactggctcagtatgggccgg
acctttcataaagtctgtctcaaagacaaaataatcactgttactcgctacctgccaaag
tacccatacgagtcagctcagatccagtacagttacagcctgtgtcctccacactctgat
gctcagtttgtctcctgctgggtggagtttggccacgagagactggaggaatacaaatgg
aactacctagaccagtacatttgctctgctggctcagaggacttcagtttgatcgactca
ctgaagttctggaggactcgcttcctactgctgccagctggaggtgcacgccgagtggca
gatggggagggccactgggatatttatggggagggagcaagtgctagggttggtggtagc
ggggactggctattgctggatggttttgtccgcttcctagagggtctcaatcgcattcgc
cgacgccaccgctctgacaggataatcaggccaaaaggcacaccaatgaaaggactgcaa
attacgagtcctctccctctatatcctcctgagcctgttgtcccacaaggcaagaaaggc
acatcggctttgtcggccctgctggagatggatcagaatcagaagacgctggaggagcag
cagcagcagcagcagatgaagccctcagcagctgtcagtgaccccaccactgctgcgaca
gctcccacacatatagacagtccccgcaaggacgctgcctttattttggattttatacgt
agcccacgttcctcctacatctatcactctcagttgcctgctgaagttaacgaggttgct
gacaaagtagtccagcttggagtgacaggtggagcaacacagccggcaggagagactgca
gccagcagcagcatagataccagtggccagtctgcaacgggagttgtctctctgtcctcc
tcctcacctcccttggagatcctggaaggaatcaaacatcccacgacaggtgtacagctt
ctcccagagcagaaaggtctcccactcaactgctttatcagcgctgaggttgttcattgg
ctggtcaataatgtcgatggagtggatacacaggcactggctgtggataagatgcagaaa
atgctggatgaaggtttggtgacccatgcttctggagaagcaatgcgcaccttcgtctac
ggtttctacttctacaggattgttggagagaaggatgggccaatctcccagctctccccc
acagcacctggagtttggtccactgcagccctggaggacttcgccctgttccagagaaag
tggttcgaagtggcttttgtatcagaggagcagcaaccctgcgacctcccgactttcctc
ctgccctggttgcccagccggcaagcctcctacgcaagtaggcacagctccttcagccgc
agctttggaggacgcagccaggccgctgcactgctagctgctacagtcccggaacagaag
acagtcacgctggatgtggatgttaacaaccgcagcgaccgtactgaatggtgcagctgt
tattaccatggaaacttctctctcacagctgcctttgagatcaaactacactggatggct
gtcactgctgcagtgctctttgagatggttcaagggtggcataggaaagcagcctcgtgc
ggcttcctgttggttccagtgctggaggttcctttcgctctgacatcctacctgtatgga
gacccactgagagcccagctcttcatccctctcaacatccagtgtctgctgaagaacgga
agtgacaagctatttgaaggtatagaagcaattagattgaatgctatgtgtgtgatagta
gattattatctgtgtgttgtcacatctttaacaggttttgaaccagagacatactgggaa
aggatgcagctcttccaggaggccatactgtacagatttggcttcgtgcacgacaagttt
tctgcttctgcttttaatttcccctctgagaacaaaccccagtacattcacgttacaggg
accttgttcctacagctcccatactccaagaggaagtactcgagtggacagcagcgccgc
cgccggaactccaccacctccaacagccacggcccgttcggcagcgaggagcaggtcggt
tactactgggcctacaacaccatgctgaccaaagcctggaggacaggtctgctgggtgac
gagaggctgtctgaccgcctgctcagggacttcactgacttctgcagcaacaaggacagt
agactgctcaacttctgggacagctgccaggacaaaatgaacactagcgctccctaa
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