Pleuronectes platessa (European plaice): 128454099
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Entry
128454099 CDS
T09923
Symbol
cyldb
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04217
Necroptosis
pplt04622
RIG-I-like receptor signaling pathway
pplt04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128454099 (cyldb)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128454099 (cyldb)
04625 C-type lectin receptor signaling pathway
128454099 (cyldb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pplt01002
]
128454099 (cyldb)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128454099 (cyldb)
Enzymes [BR:
pplt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128454099 (cyldb)
Peptidases and inhibitors [BR:
pplt01002
]
Cysteine peptidases
Family C67
128454099 (cyldb)
Ubiquitin system [BR:
pplt04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128454099 (cyldb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
B129_C2H2-zf
zf-HIT
Motif
Other DBs
NCBI-GeneID:
128454099
NCBI-ProteinID:
XP_053293272
LinkDB
All DBs
Position
2:23108315..23114776
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AA seq
700 aa
AA seq
DB search
MDSKTVVKEKYFIVTRGKSRKGFCRGCIGRVETETQSGELMGLLYSGGSNVGSPKSGGMV
RREDTYPLTRHQAQLLLFVSSFSKRLELLCNPQLFSAICELTQDDLVVVKHKKGHLPGLV
KNLMQIGRKENKDDLYMLGFEVEMVDSDHNLSSKKPTPLPLFSAADIIQVIPSYSVPLGL
HWKDGQCLNTKAVTRINSMPITSSRARQGRESHRESSVIQKPSASPAPLEVGSMVEVMSN
SKITVYGVVQWLGVPAGKTGEWAGIELEYEVNGCSDGNYGGQRYFTCKASRALFVPVTKC
SPDGRFVYSSTGSGTSKPTEIPPVPPFEDPEEDAPPIPESEALSLLEGRMKGIQGHINSC
YLDATLFSLFSTSVTLDHICKKPADTEQPITCTLRKIVNRLRRQGFVPTESVMNFRKQLG
CDTFQTEEKDPEELITVLFQKVLSTEPLLKLRSRRETCQGAYTLQIFLEKEQMGQMPTVQ
QLLDTSCLSGDIKFDEAPYCLIVQMPRFGNKYKMFSHIIPSTELDITDILYNSPRECFVC
GNLAEYECLQCLPDRKLQPGRIKQFCTTCNTQVHSHHTRQGHSPKPLQVPANVAPDTPVP
RHVMQLFAVLCIQTSHYVSFVKYGPDPRSWLFFDSMADRCGDDQSGFNIPEIRACPELGD
FLSQPEEELARANPSQTPELTRRLLCDSYMFLYQSPATPL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggattccaaaactgtcgtgaaggagaagtatttcatcgtgacacgagggaagtcgagg
aaaggcttctgccggggatgcatcggccgtgtggagacagagacgcagagtggggagctg
atgggactcctgtactctggtggcagcaatgtcgggagccccaagagcggcggcatggtg
cggagggaggacacgtaccctctgacccgacaccaggcccagcttctgctcttcgtctcc
tctttcagcaagcgcctggagctgctgtgcaacccacagctgttctcagccatttgcgag
ctgactcaggacgacttggtggttgtgaagcacaagaagggacacctgcccggcctggtg
aagaacctgatgcagattgggaggaaggagaacaaagatgacctctacatgctcggcttt
gaggtagaaatggtggacagtgatcacaacctgtcatccaagaaacccactcccctgccc
ttgttcagtgcggcagacatcatccaggtgattccgtcttactcggttcccctcggactg
cactggaaggatggacaatgtctgaacacaaaagcggtgacacgcatcaactccatgcca
atcacaagttcccgtgcacgccaagggagagagagccatagggagtccagtgtcattcag
aaacccagcgcgtctcctgcgcctctggaggtgggatccatggtggaggtgatgtccaac
tctaagatcacagtttacggagtcgtccagtggttgggagtccctgcaggaaagactggt
gaatgggctggaatcgaactggaatatgaggtgaacggctgctctgatgggaactatgga
ggccagagatatttcacctgcaaagcgagccgagctttgtttgttcctgtcacaaagtgc
agccctgatggcagatttgtctactcctctacaggaagtgggacctcaaagcccactgaa
atacctccagttcctccatttgaggaccctgaggaggacgcaccacctatccctgagtca
gaggccttgtctttgttagagggaagaatgaaggggattcagggtcatatcaactcctgt
tatcttgatgccacactcttcagtttgttcagcacgtctgtgaccctggatcatatctgc
aagaagcctgctgacactgagcaacccataacctgcactctgaggaaaatagtcaaccgt
ttacgcagacaaggatttgtgccaactgagagcgtcatgaatttccgcaaacagctcggc
tgcgacacatttcaaacagaggaaaaggaccctgaggagctcatcacagtcctctttcag
aaggtgctcagcacggagccacttctcaagctcagatcgaggcgagaaacatgtcagggt
gcctacaccttgcagatctttctagaaaaagagcagatgggacagatgcccaccgtccaa
cagctgctggacacgtcctgcctgtcaggtgacatcaagtttgatgaggctccatactgt
ctcattgttcagatgccacggtttggaaacaagtataagatgttttctcacatcatcccc
tccactgagctggatatcacagatattctatacaactctccaagagaatgcttcgtctgt
ggaaatttggccgagtacgagtgtcttcagtgtctaccagatcgcaaactacagccagga
agaatcaaacagttctgcactacctgcaacacacaggtgcacagtcatcacacccggcag
ggtcactcccccaaacctctacaggttccagcaaatgtcgcccctgacactcctgtgccc
agacacgtgatgcagctgtttgctgtgctctgcattcaaaccagccactatgtgtctttt
gtcaaatatggccctgacccgcgctcctggctcttctttgacagcatggcagacagatgc
ggtgacgatcaaagtggcttcaacattccagagatccgagcttgtccggagctgggcgac
ttcctgtcccagccggaggaggagctggctcgggccaacccctctcagactcctgagctg
acgcgtaggcttctgtgtgactcctatatgtttttataccagagcccagccacgccactt
tga
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