Pleuronectes platessa (European plaice): 128454133
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Entry
128454133 CDS
T09923
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128454133 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pplt01009
]
128454133 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128454133 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
pplt03029
]
128454133 (rb1cc1)
Protein phosphatases and associated proteins [BR:
pplt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128454133 (rb1cc1)
Membrane trafficking [BR:
pplt04131
]
Autophagy
Autophagosome formation proteins
ULK complex
128454133 (rb1cc1)
Mitochondrial biogenesis [BR:
pplt03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128454133 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
128454133
NCBI-ProteinID:
XP_053293359
LinkDB
All DBs
Position
13:8711439..8725138
Genome browser
AA seq
1657 aa
AA seq
DB search
MKLYVFQVNNGCTLTFDTDLAVQTVLELKHAIQAKYKIATQHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVRVEESLLMPAVFHTVASRTQ
LALEMFEVATKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLVKFDASYSNYQH
ELEEIKVKLTKLGTAVSVMARIPLLESLTRHSYRESMEKSSPTPGKDSDGTEEEKSSESL
RYTAEAKRPPRSSASFSASQAATCKPTGDHETNEMTDRGGLRAALLDDDDDDDDDDEDDE
DDDDDDTPEFANPSSFNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRVIQPFLTDCR
DTIAKLDNQNMKAIKGLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSV
LPDLCLSHTNQLMIMLNNHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDSEK
LQALLRLLTELLERVRVVEALSTVPQMYCLAVVEVVRRKMFMRHYREWAYALVKDGKRLY
EAEKFKRESFGKLFRKSFLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISLDDLQFLKS
CCPVEVQPFLMHSPYLFRVPTMCDFEPLNRHVETLHQLVQAAQSVDEMSQTITDLLNEQR
VSYCRSTHRSTMQTPQSESIPGSTTPGSSKTPTSLGLQGPGCQPLHVPVPAPLEDLSPDS
IDAQTFDFETIGHPNMDPVLQQGSLDLDSLAESPESDFMSAVNEFVIEGNLTSPNPISDP
TSPDMMVESLYSSVINAIDNKRMQDTTTLERENFRITVLKKVIEKYQSAAEESHSNLRSV
KDDLHHLRGLVLKEQHDFGFVLRNMTTEVHKVVDNFCLTHELKLKEQHQSELLSVRQELE
KQVQTLTEENQVNQNIVRDVQRAMLELEGLMEHKEKELAHLENERERWMETERGQTDRIT
NLEQMISDKAEEIKTISAARESLTSQLENLHIEIERGQQKIRQELEAVEQSHLKELEVRM
MQEHKAQLETLTQQNKEALEHLASENSANLSEAVDQHATAFGEKENQIKDLEARITELDE
LRCKLEIELALKESETEEVRLLFEEAKTQQAEAVKSQVEAETNVLSKELADIEKQLQVKN
EEYEVGLAELRSLMRREKDHCISELVDRHEEETILLRNELCSLQQQSQDGERNHSEQKQR
LKQELEQQVAQNEEKEKQFTSFRELEQELRTLVNKLQTENDLLSQKVEQDRRATETELEK
QESTKDASQEALKELEQQKEEMENRLLKQIKQLESELHERRSSKSDEGSSLHAEELADAA
APLSLDSALKEQMQQERASLLSQIELLEKKKNEEIQNLKTSLIAESQTNFNTVLTREKLK
KEQIIHDLTEKLQNVTQQQERDKALIESLSEDRASVMQEKKHLEEELNRLRCTALVSSAF
FSPHPSALEVTEAGASGALGASVAGAAAARALYVARSCSSEPMAETDRLASVAAIREDEN
VDSAVEASMVTSHDNILMSEEKQRILLLERTLHMKEEENKRLSQRLMSQSMSSVSSRHSD
KIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESLTALDLKPASGTSRRPWVLG
KVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNRKV
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggctgcacgctgacatttgacactgacctt
gctgtccagactgtactggagcttaaacatgccatccaagccaaatataagattgcaact
caacatcaagtccttgttgtcaatggaggggaatgtatggctgcagagagacgagtctgc
agctacagtgctggcactgaaaccaatcccatattcttgttcaacaaagagatgatcttg
tgtgaccgggatccaacgatccccaaaaccaccttctcgattgagagtgagattcaagtc
agggtggaggagtctctactgatgccagctgtttttcacactgttgcctcacgaacacaa
ctggctctggaaatgtttgaagttgccacgaaactttgctctttctgtgaacgtctggtt
catgatgaacaccttcaacaccaaggctgggctgctatcatggctaatctggacgactgc
actctgtcttatcagaagttgcttgtgaagtttgacgcttcatactcaaattatcaacat
gagttggaagaaattaaagtgaaacttacaaagttagggacagcggtttctgtaatggct
aggatacctctgctggaaagtttgacaagacacagttacagagagagcatggagaagtcc
agtccaaccccaggaaaggattcagacgggacagaagaagaaaagtcctctgagtctctg
cgctacactgctgaggcaaagaggccccccaggtcatcagcatccttctctgcttcacaa
gcggccacatgtaagccaactggtgaccatgaaacaaatgaaatgacagacaggggtggg
ctgagagctgcgctattagatgatgatgatgacgatgatgatgatgatgaggatgacgag
gatgatgacgacgacgacaccccagagtttgccaacccgtcctccttcaatgtcacgcta
ttagactggatcaacgtgcaagacagacccaatgatgtggaatcagttgtgaggaaatgc
tttgactccatcaataggcttgacccacgcgtcattcaacccttcctgacagattgtcgt
gacactattgctaagttggataatcaaaacatgaaagccatcaaggggcttgaggacagg
ttgtatgcacttgaccaaatgattgcaagctgtaagaagttagtgaacgaacaaaaagaa
cttgctcagggatttttggccaatcagaagcgtgctgaaaacctgaaagatacatctgtt
ctgcccgacttgtgtctgagtcacaccaaccagctgatgatcatgctgaacaaccacagg
aagctgctcgacatcaaaaagaagtgcactactgccaaacaagaacttgcaaacaacctt
caagtcagactcaaatggtgctgctacgtgatgcttcatgcagaccaggacagtgagaag
cttcaggctctactcagactcctgacagagctattggaaagagtgagagtggtggaggcc
ctcagtactgtgccccagatgtactgcttggcggtggtggaggttgtgaggagaaagatg
tttatgcgccactacagagagtgggcttatgcacttgtgaaggatggcaaacgactgtac
gaggctgagaaattcaaaagggaatccttcgggaaactctttaggaagtctttcctcaga
aatcgtttgtttagaggactggattcgtggcctccaacatcattctgtacacgaaagccg
agaaggtttgacgatgaacttccagacatttcacttgacgacctgcagttcttgaaatct
tgttgtcctgtcgaggtgcaacctttccttatgcattccccatatcttttcagggttcct
acaatgtgtgattttgagcccttaaatcgtcatgtagagacccttcaccagctggttcaa
gcagcgcagagtgtggatgagatgtcccaaactatcactgacctgttgaacgaacaacgg
gtatcctattgtcgtagcactcacagatcaaccatgcagaccccacagtctgaaagtata
cctgggagcaccacaccagggtcctccaaaacccccacctctcttggccttcagggtcca
ggctgccaaccccttcatgttcctgtcccagctcctttggaggacttgtccccagacagc
attgatgcacaaacttttgactttgaaaccatcggccatccgaacatggacccagtcctg
cagcagggctccctcgacctggattctctagcagagagcccagagtctgatttcatgtcc
gctgtcaatgagtttgtgatcgaagggaacttgacctccccgaaccccatcagtgacccc
actagccctgatatgatggtagagtctctgtactcttcagtgatcaacgccatcgacaat
aagcgtatgcaggacaccacaacactagagagggagaattttaggatcactgtcctcaaa
aaagttattgagaagtatcagtctgctgcagaggagtcccattccaacttaagaagtgta
aaggatgacctccatcacttacgaggtctagtgttaaaagaacaacatgactttggcttt
gtcctgaggaatatgaccacagaagtacacaaagttgtggacaacttctgcctgacccat
gaactgaagttgaaggagcagcatcaaagtgagctgctctctgttcggcaagagcttgag
aagcaggttcagacactaacggaggaaaaccaagtaaaccagaacattgtgagagacgta
cagcgtgcgatgctcgagctggagggccttatggagcacaaggagaaagaacttgctcat
ctcgagaatgagagagagcggtggatggaaacggagagaggccagacggataggatcaca
aatctggagcagatgatcagtgataaagctgaagagatcaagacgatttcagccgcaaga
gaatccctgaccagccagcttgagaatctccacattgagattgaacgtggccagcagaag
attcgacaggagttggaagctgtggagcaatctcacttaaaggagctagaggtcagaatg
atgcaggagcacaaggcacagctggagactcttacccagcagaacaaggaggctctggaa
catctggcttctgaaaacagtgcaaatttaagtgaggctgttgatcaacatgccactgcc
tttggagagaaagaaaaccagatcaaggacttggaggctcgcataactgagcttgatgaa
ctccgttgtaaactcgagattgagttggccctcaaagagtcagagactgaggaggtgaga
ctcttatttgaggaggccaagactcagcaggccgaggctgtgaagtctcaggttgaggct
gagaccaatgtcctcagcaaagagctggcagacatcgaaaagcagcttcaggtaaaaaac
gaggagtatgaagtgggcctggcagagctgaggagtctcatgaggagggagaaggaccac
tgcatctctgagctggtggacagacacgaggaggaaactatcttgttgcgcaatgagctc
tgctccctgcagcagcagtcccaggatggtgagaggaaccattcggagcaaaaacagaga
cttaagcaggaattagagcagcaagtggctcaaaatgaagagaaagaaaagcagttcacg
agcttccgagaactggagcaagagctgaggactctcgtcaacaaactacagacggaaaac
gatctgctctcccaaaaagtagagcaggacagacgagccactgaaacggaactagaaaaa
caagagtccaccaaggatgcatcacaagaagccttaaaagagttggagcagcagaaggag
gagatggaaaacagactgttaaagcaaatcaaacaacttgagagtgagcttcatgagaga
cgatcttcaaaaagtgatgaagggtcgtcgctgcacgctgaggaacttgcagatgcagca
gcgcctctgtctctggactctgcactaaaagagcagatgcagcaggagagggcctcgctg
ctgtcccagatagagctcctggagaagaagaagaatgaggagatacagaacctcaagaca
tcactaatcgcagaatcgcagactaacttcaacactgttctaacccgagagaagctgaag
aaggagcagatcatccatgacctcacagagaagctgcagaatgttacccaacagcaggag
agggataaagctctgatagagtctctctctgaggaccgggcgagtgtcatgcaggagaag
aaacacttggaagaggagctcaatcgcctgcgctgcactgcactggtctcctctgccttc
ttcagccctcacccatcagccctggaggtcacagaggcgggagcatcaggagcactagga
gcatcagtagcaggagcagcagccgccagagctctgtatgtagctaggtcctgctcctct
gagcccatggctgaaactgacagactggcctctgtagcagccatacgagaggacgaaaat
gtcgactcagcggtggaggccagcatggtgacatcccatgataatatcctgatgtcagag
gagaaacagcggatactcctactcgagaggactttacacatgaaggaagaagaaaacaag
cgcctcagtcaaagactgatgtctcagagcatgtcgtctgtgtcgtcacggcattcagac
aaaatcgccatcagagacttccaggttggtgatttggttctaatcatcctggatgaaaga
cacgacaactatgtgctgttcacggtcggacccaccctctacttcctccactcggagtct
ctcactgcactggacctcaaaccagcttcagggacttcaagacggccgtgggtacttgga
aaagtgatggaaaaggaatattgccaggcgaaaaaggcccagaacaggttcaaagtccct
ttaggaaccaagttctacagagtgaaagctgttccatggaacagaaaagtataa
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integrated database retrieval system
