Pleuronectes platessa (European plaice): 128454145
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Entry
128454145 CDS
T09923
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pplt03036
]
128454145 (hfm1)
Enzymes [BR:
pplt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128454145 (hfm1)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Meiosis-specific proteins
Others
128454145 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
128454145
NCBI-ProteinID:
XP_053293383
LinkDB
All DBs
Position
13:complement(15634224..15652824)
Genome browser
AA seq
1564 aa
AA seq
DB search
MLDPSDCSLSLDNLFFEKPIVHKVKPLHQETSPWHLDVPPSLSQIPATHDKQEEAESLPT
RYNFSVKRVPASRSLPPFKLSAGLKVLSQINSCYGFNHDEKEFEDTQCGSNSNSISKCDG
LWGGEGFRDYSQGACQSGRGGDETPQDSGHVAVSRRCLSLDGSKSPLLRRSLFKVQVSNS
GGDSSHTGDLGIRGSSSQTASRPQTFLSQVTMATVPPPLQPPRATVCKAAPPFPPKPLFS
PPLLGSTAASGRPPQQATHSEMPDRATKRAFVPPMTPQPLCIQGSSGPEVLRPVSEIPSK
FRSVFNEFPFFNYVQSKALDDVLYTGKNFVACAPTGSGKTVLFELAIIRMLMETSEPWRD
VKAVYIAPIKALCSQCFESWRKKFGPLGLICKELTGDTEIDDFFEIQDSHIILTTPEKWD
SMTRKWKDNCLLQLVRLLLIDEVHVVKDKTRGATLEVVVSRMKAVNTYRTAQNPESGLSI
RFMAVSATIPNISDIADWLSNESGPATYLEMDESHRPVKLRKVVLGFPCNQNQTEFKFDL
SLNYKMANIIQTYSDHKPALVFCSTRKGAQQSAAVLAKDARFIMSIEHKQRLLKYANSIL
DSKLRELVMFGVGFHHAGVEMSDRKLIEEAFTLGDLPVLFTTRTLAMGVNLPAHLVVIKS
TMQYVAGSCEECSESDLLQMIGRAGRPQFDTSATAVIMTKVQTRDKYMKLMSGMEIIESS
LHGHLVEHLNAEIVLQTISDVNMALDWIRSTFLYIRALKNPTHYGFSAGIDRHGIEAKLQ
ALCLKNLTSLSSIGLIHMDEDINIKPTEAGRLMARYCVAFDTMTQFCKVAGTENLSDLIE
LLSKSREFSDIQLRVNEKRPLNTLNRDKNRITIRFPIEGKIKTSEMKVNCLIQAQLGSIS
IQEFGLTQDTAKIFKNGMRVSKCLTEFLSQRSKAGFSALLNSLILAKCFRSKLWENSPYV
SRQMEKIGQTLSTAMVNAGLTTLSKIEQTNPRELELILNRHPPFGNQIRESVMNLPKYEV
TLEQLPRYSCATAEIVVKVNLKNQAQLLSRRTAPDHHYVSLIIGDSDNSVVFIQKLTDLV
LLRCGSWSKKIEVAKASKGEEISVNLISSEYVGFDIQQQFNVYFSGARRFGADNPCHTSC
DPTGQRAQHSALKPQSGDPATPQRENTTSVTDRDSGNKRQCNHFCKNKDLCGHDCCKVGV
NVAKKRSTNQEYGFSSHLKDLRSRCDTLAQTPVKRLKMKMSEESASVNMQNFAYKPKERL
PTVSWYGVNDNGASERPHTDTVDLTGEDCTELTDTIQLDEFDSEYYDYVGDTYETTEETV
RTPAASHTHHQTSSVWMNQGISVWSQNSELHLNRTNTTTSSHSERPTAVTSQGSYCETAL
SAQIPTVTFDLGNEWDDWGDFDDEHLVHASETSFASCTTNAKPQTQQSVECNMPGFRATS
AHPLFFSPSQVKSCTTPAMTPLRLISPNLRSEIRKPGPSLVTVRPQNRVTLDFNKKRPGI
FSEEIRVKTRETLPEQKQSVPETRRFDFFSTVRVPANTSTRSSINRSISSQEEEAYIGIF
DGIF
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgttggaccccagtgactgctccttgtccctggacaatctgttttttgagaaacccatt
gtccacaaagtaaagcctctgcaccaggagactagtccatggcacctggatgtgccccca
tccctttctcagattccagctacccatgataagcaggaggaggcagagtcactccctacc
cgatacaatttctcagtgaaacgtgttccggcctcaaggtcccttcctccttttaaatta
tcagctggccttaaagtcttatcacaaatcaacagctgttatggttttaaccatgacgaa
aaagagtttgaggacactcagtgtggcagcaacagtaacagcatcagcaaatgtgatggc
ctttggggaggtgaagggttcagggattactctcagggtgcctgtcagagtggcagaggt
ggagatgaaaccccgcaggactctggtcatgtggccgtcagcaggaggtgtttgtctctg
gacggcagcaaaagcccacttctacggagaagcttgttcaaggttcaggtgtcgaacagt
ggaggtgactcgtcacacacaggcgacctcggtatccgcggcagcagcagccagacagct
tcccgacctcaaacttttctcagtcaggttaccatggcgacagtacctcctcctcttcag
ccgccacgggcgacagtttgcaaagcagctcctcctttccctccaaagcccctcttttca
ccccccctcctgggctcaactgcagcaagtggccgacccccacagcaggccacacactcc
gagatgccggacagggccacaaagagagccttcgttccgcccatgacgcctcagccgctc
tgcatacaaggttcttctgggcctgaagttttgcgacctgtctcggaaatcccctcaaag
ttcagatccgtcttcaacgaattcccgtttttcaactatgttcagtccaaagcgctggat
gacgttctttacacaggtaagaactttgtggcatgtgcacccactggatctggaaagaca
gtgctgtttgagctggccatcattcgcatgctaatggagacgtcggagccctggagagat
gtcaaagctgtctatattgcccccatcaaagctctgtgcagtcagtgcttcgagagctgg
aggaagaagtttgggcctctgggtctgatctgtaaggagcttacaggcgacacagagatt
gatgacttctttgagattcaggactcccacatcatcctgaccacgcctgaaaaatgggac
agcatgacaagaaaatggaaggataactgtctgctgcagctcgtcaggctcctccttatc
gatgaggtgcatgtggtgaaagataagacccgtggtgccacgttggaagtggtggtgagc
aggatgaaggcagtgaacacatacaggacagctcagaatccagagtcaggcctctcaatc
aggtttatggcggtttcagccaccatacccaacatctctgatatagcagactggctgtcg
aatgagagcggtccagccacatatctggaaatggatgaaagccatcgtccagtgaagctc
aggaaggtggtgctgggattcccctgcaaccaaaaccaaacagagtttaagtttgatctg
tcactcaactacaagatggccaacatcattcagacttactctgaccataagcctgcttta
gtgttttgctctaccaggaaaggagcccagcagtcagctgcagttctggccaaggacgct
cggttcatcatgagcattgagcacaagcagaggttgttaaaatatgcaaactctattctg
gattccaaactgagagaactggtgatgtttggagttggtttccaccatgcaggagttgaa
atgtcggacaggaagttgatagaagaggccttcactctgggagacctgcctgtcctcttt
accaccaggacgctggccatgggggtgaacctgccagctcatctggtggtgatcaaatcc
accatgcaatatgttgcaggctcctgtgaagagtgcagcgagtctgacctgctgcagatg
ataggccgagctggaagaccacagtttgacacatcagcgactgcagtgatcatgaccaaa
gttcaaaccagagacaagtatatgaagcttatgagtgggatggaaatcattgagagcagc
ctacacggtcacctggtggagcacctgaatgctgagattgttctccaaaccatcagtgat
gtcaacatggctcttgactggatacgctccaccttcctctacatccgagccctcaagaac
cccacgcactacgggttctctgctggcatagacagacatggaattgaagcaaaattgcaa
gctctgtgcctgaagaacctcacctctctgtcctccatcggtctgatccacatggatgaa
gatatcaatatcaaaccaacagaggccggtaggttgatggcgagatactgtgttgctttc
gacaccatgacgcagttctgcaaagtggctggcaccgagaacctgtctgacctgatcgag
ctgttgtcaaagagcagagagttcagtgacattcagttgagagtgaatgagaaacggccc
ctgaacactttgaacagggacaagaacaggatcaccatcaggtttcccattgagggaaag
atcaaaaccagcgagatgaaagtgaactgcttgattcaggctcagcttggttctatctca
attcaagagtttggactcacacaggacacagcaaagatcttcaagaatgggatgcgtgtc
agcaaatgtctgacagagtttctgagtcagcgatctaaggcaggtttctctgctctgctc
aactccctgattctggccaagtgcttcagatcaaagctttgggagaactcgccctatgtt
tccagacagatggagaagataggtcagactctgtcgactgccatggtgaacgctggactc
accactttgagcaaaatcgagcaaaccaacccaagagagcttgagctgattctcaacaga
catccaccatttggaaatcagatcagagaatctgtcatgaatcttccaaagtatgaagta
actttggagcagcttcccagatacagctgtgctacagcagagattgtggtgaaagtgaac
ctaaaaaaccaggcccagctgctgtccaggagaacggctccagaccaccactacgtgtca
ctgatcatcggagactctgacaacagtgtggtcttcatacagaaactcacggacttggtg
ctgttgcggtgcggtagctggtcgaaaaagattgaggtggcgaaggcctcgaaaggagag
gagatcagtgtcaatctcatcagctcagaatatgttggcttcgacatccagcagcagttc
aacgtgtacttctctggagccaggaggtttggtgctgataatccatgccacacatcgtgt
gatcctacgggacagagagcgcagcactctgctctgaaaccacagtcaggtgatccagct
acacctcagagggaaaataccacatctgtgacagaccgagattcaggcaacaaaagacag
tgcaaccacttctgcaagaataaggatctctgtggccacgactgctgtaaagtaggagta
aatgtggcaaagaagaggtccacaaatcaagaatatggtttctcttcccatttgaaagac
ctcaggagcagatgtgacacattggcacagactcctgtcaaacgactcaagatgaaaatg
agtgaggagtctgcgtctgtcaacatgcaaaactttgcttacaaacccaaagagagactt
ccgaccgtttcctggtatggagtaaatgacaatggagcctcagagagacctcacactgac
actgtggatctgacaggagaagactgcactgaactcacagacacgattcagctggacgag
tttgacagtgaatattacgattacgttggagacacgtacgagacgacggaagagacagtc
cgaaccccggctgcatctcatacccaccatcaaacttcttcagtgtggatgaaccaggga
ataagtgtttggagtcagaactctgaactgcatctaaaccggaccaatacgaccacctca
tctcattctgagaggcccactgcggtaacaagccaaggctcatactgtgaaactgcttta
tccgcacaaataccaactgtcacctttgacctcggaaatgaatgggacgactggggcgac
tttgatgatgagcacctggtgcacgccagcgagacgtcatttgcttcgtgcacaactaat
gctaaacctcagacccagcagtctgttgagtgcaacatgccaggcttcagggctacatca
gcacatccactcttcttcagtccctcacaagtcaaatcctgtacaacccctgccatgaca
ccactgagattgatttcacccaatctaagatctgaaatcagaaaaccaggaccgtcacta
gtcacagtcaggccacagaaccgagtcactcttgactttaataaaaagagaccaggcatc
ttcagtgaagagatccgagtaaaaacaagggaaactctcccagaacagaagcagtcggtc
ccagagaccagaaggtttgatttcttctcaacagtgagagtcccagccaacaccagcacc
agatcatctatcaacagaagcatcagcagccaagaggaggaagcttacattgggatattt
gatggcatattttag
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integrated database retrieval system
