Pleuronectes platessa (European plaice): 128454152
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Entry
128454152 CDS
T09923
Symbol
copb2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128454152 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pplt04147
]
128454152 (copb2)
Membrane trafficking [BR:
pplt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
128454152 (copb2)
Exosome [BR:
pplt04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128454152 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
128454152
NCBI-ProteinID:
XP_053293394
LinkDB
All DBs
Position
13:complement(14513763..14520440)
Genome browser
AA seq
947 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTNGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKLFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELVRRIEIQPKHIFWSDSGELACIA
TEESFFILRYLADKVASSHENNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRENLAKV
NQKAAESLADPTEYENLFPGLKEAFAAEYYLRETCLGTSRPATDYPLVTPNEDRNILEEA
VGYEPKGTFIPTKTQDPEKKEEEDEEEEEKLISSMAEFSVAAAAAAPEVAFQPESADPTA
VEEQEEEIPEFSLKDKILDELEVDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacattaagcggcggctgacagccaggtcagaccgggtgaagagt
gtggacctccaccctactgagccatggatgctggccagtctctacaacggcagcgtctgt
gtgtggaaccacgaaacacagactctcgtgaagactttcgaagtgtgtgaccttcctgtc
agagcttctaagtttgtggcaaggaagaactgggtcatcacaggagcggatgacatgcag
atccgtgtgttcaactacaacaccttggagcgggtccacatgtttgaggcccactctgac
tacatccgttgcatcgctgtccatccgacccagccatacatccttaccagcagtgatgac
atgttgatcaagctgtgggactgggagaagaagtggtcctgcagtcaggtgtttgagggc
cacactcattacgtcatgcagattgttattaaccccaaggataataatcagtttgccagt
gcctccctggacaggacgattaaggtgtggcagcttggttcttcatctcccaatttcact
ttggagggccatgagaaaggagtcaattgtattgattactacagtggaggagacaagccc
tacctcatctcaggggctgatgatcgccaagtcaagatctgggactaccagaacaagacc
tgtgttcaaactctggagggccacgcccagaacgtctcttgtgtcagcttccaccctgag
ctgcccatcatcatcactggatcagaggatggtactgtgcgtatctggcactcgagcact
taccgtcttgagagtacactgaactatggcatggagagagtgtggtgtgtaagtggcctc
aggggctccaacaacgtggcgctgggctacgacgaaggcagcatcattattaaggtgggt
cgtgaggagccagccatgtctatggacacaaatggcaaaatcatctgggccaaacacagt
gaagtacagcaggcaaatctgaaggccatgggtgatgctgaaatcaaggatggagagagg
ctgccactagctgtcaaagacatgggcagttgtgagatttaccctcaaaccatccagcat
aaccctaatggaaggttcgttgtggtttgcggagatggagagtacatcatttacactgcc
atggctttgaggaacaagagcttcggttcagctcaggagtttgcctgggctcacgactcc
tctgagtatgccatcagagaaagcaacagtgtcgtcaaactcttcaaaaatttcaaggag
aaaaaatctttcaagcctgactttggagcggaagggatctatggaggcttcttgcttggg
gtgaggtcagtgaatggcctggccttttacgactgggagaacacggagctggtccgccgc
attgagatccagcctaaacacatcttctggtcagactctggtgagctggcttgcattgct
acagaggagtccttcttcatcctgcgttatctggctgataaagtagcttcctctcatgag
aacaatgaaggagtgactgaggatggtattgaagatgcctttgaggtccaaggagagatc
caggagattgtgaagactggtctctgggtcggagactgcttcatctacaccagctctgtg
aacagacttaactactatgttggaggagagattgtcacaattgctcatctggacagaacc
atgtacttactgggttacatacccaaagatgatcgtctgtacctcggagacaaggagctc
aacattgtcagttactccctgctggtttccgttctggagtaccagactgctgtaatgagg
agggactttgggatggctgacaaggtgttgcccacaattccaaaagagcagcggaccagg
gtggcccatttcctggagaaacagggtttcaagcagcaggcactggctgtgtccacagac
ccagagcacaggtttgagctggccttgcagctgggagagttgaagattgcttatcagctg
gctgtggaggcagagtcggagcagaaatggaagcagctagcagagcttgctatcagcaag
tgtcaattcagcctggcccaggagtgtctgcaccacgcccaggattacggtggcctgctc
ctccttgccacagcctctggtaacgccacaatggtgggcaagctggctgagggggcagag
agggacgggaagaacaatgtggccttcatgacctacttcttgcaggggaaactggatcag
tgtttggagcttctgatcaagaccaaccgactgcctgaggctgccttcctggctcgcacc
tacctgcccagccaggtgtcccgtgtggtgaaattgtggagggagaacctggcgaaggtc
aaccagaaggcggctgaatcattagcagaccctacagagtatgagaatctgttccccgga
ttgaaagaagcctttgcagccgagtattatctgagagagacctgcttgggcacctccaga
cctgcaactgactatcctcttgtcacacccaatgaagacaggaacattcttgaggaggct
gtaggatacgagcccaaaggaaccttcattcctacaaagacacaggatcctgagaagaag
gaggaggaggacgaagaggaggaggagaaattaatatcctcaatggcagaattttctgtt
gctgcagcagcagcagcacctgaggttgcttttcaacctgagtctgctgatcccacagca
gtggaggaacaggaggaggaaattcctgaattttcactcaaagacaagattctggatgag
ctggaagtggaccttgacaacatggagctggatgacattgacaccacagacgttaacctt
gatgatgacttcctagatgattaa
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