Pleuronectes platessa (European plaice): 128454181
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Entry
128454181 CDS
T09923
Symbol
acin1a
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03013
Nucleocytoplasmic transport
pplt03015
mRNA surveillance pathway
pplt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128454181 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
128454181 (acin1a)
03015 mRNA surveillance pathway
128454181 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128454181 (acin1a)
03041 Spliceosome [BR:
pplt03041
]
128454181 (acin1a)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128454181 (acin1a)
Spliceosome [BR:
pplt03041
]
Complex C
Other components
EJC/TREX
128454181 (acin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
128454181
NCBI-ProteinID:
XP_053293443
LinkDB
All DBs
Position
13:complement(18711010..18727352)
Genome browser
AA seq
1724 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNALIKRLKGALMLENLQRTSTAH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAYDTNDQEDHAEVHNSTSCP
PQAQDVTPALPEQHKPPGPSGGEGFFSEGNDEEGDRNNEADMSSPPASGSVAMRVPAGEH
RPERDFASSEVAADSDDDDSDEAEEDGDDDDWDSGARRRNLREPARVPSSRERSGASCQP
QQQHIPSLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPDVAPPRHSPSTSSSGSSSS
GSRSSSPEPQRSGHNERKPGPLTLLARKMESEGAFSGAGWHGGDVEGDRRDNSSPSATLF
PSRGPPEGLVSAITHTANTAGHMPFPMIPGTNQGVTGAHSAHIQVPVSVLKANTTGERDR
QRELEIEREELERQRKLEQEKAMELERERALALEREEKQRALERERIERQQALEREEREK
ALQLERALALERERKERELVLERERQERELALERERLERELALAKEREEREQALARERKE
RELVLERERREREQLALAIEMEEREQALARERALERQKELERQRVLEQERLQREREDREK
REREEMERAMELERAKALERERQERERAIEQERLERERALEAERRQRFEREKALEQEKLE
RERLEREKALEHERLERERALEQEKIEKEKALEQERIEKERTLERERIEREKALELERIE
REKALKQERLERERALELERKEKERIEQERGLERERIGREKALEREREEKERAERKSALE
KERAERLEGEKLEQERALEKETKEKERALKEERERALERQRKEKEEQEKEQARMAEKERE
SHLPPSKRGREIGLTSLPTPPSLSTGQARKLSTEAGAQEDVHAQIPRSESQAAESSSPMS
PTPLSQQSSFKKFRFLRDSPIQPQPSSTSMVIKRPRTFSDTPQPQASPVLSPSSVAEQLQ
QEGHRPSAGQEDRKMQIKPEVVAEPPGPTKNEAAKPVPDDKEQAESVKAEHAAKDSTQKV
DESKNRSSPLAQREGRDAKKQEKPTRRRSTSNDSSSSGSGSESSSSRSSRSSASSQEETS
SSRNRREVKPVRDSSPPHRMTVEILAEGSKEIPEATPPKRAVSGEMSNTTAYGDSHIKKP
FVEAAPGEETQRKRTDSEREEEKDKQRQVKETGMAESEKLQENSEETPKAFSARKISLSS
NKLSPGPGSVEGEQESGAAAGRKRRWGSSTAVTAKKPSISITTDSLKSLIPDIRPCLGQE
AIVDLHPEEAVLSGVEDEERERSDQDLQIRRTVTQVVHLESKENGQKEVKRSRHEDLEEE
DLQEEKDRGMTLEEKMDVSFPGAVETQSPSHTGHDVEINTVTPSDTLIRRSISQQKTGVS
ITIDDPVRTSQQPSPPRGKVSNIVHVCNLVRPFTLGQLKELLSRTGTLVEDSFWIDKIKS
HCYVTYSCSEEAVATREALHGVKWPQSNPKVLSVDFCQQDELDFHKGLVMADRTGAEEQG
PGTGRGRTSGLPSLLPERDQWAEREREMERRERAKAEREWDRDKVKEFGKPGSEKEGGPR
RSRSRERKRKERGKSKDKKTEKKEKAAEDPPAKLLDDLFRKTKAAPCIYWLPLTDEQFIQ
RETARADRAKEREKRRKEQEEEEEKKREEERKERMKAGGGTTGDRSEGEKDKDRERDRGR
ERDRERERENDKRRDGFRRQGGSGAGGGSSRRSRSRSDPRERRR
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctggacgggagaccgctccagtccctccgagtggcg
gatctgaaggcggctctggaggagagggggctctcaaagagcggccagaaaaatgctctg
atcaagcgactcaagggggcacttatgttggagaatcttcagaggacctccactgctcac
attggcctgcagccaaactctcagattggtgaggaaatgagccagaacagctttatcaag
cagtatctggctaaacaacaggagcttctgcggcagcgtctggagagggaggcccgcgag
gcatatgacacaaatgatcaagaggaccatgcagaagttcacaatagtacctcatgtcct
cctcaagcccaggatgtcacaccagcattgcctgagcagcacaaaccaccgggcccctct
ggtggagagggattttttagtgaagggaatgatgaagagggtgataggaacaacgaagct
gacatgtccagtcctcctgcgtctggctctgtggccatgcgtgttcctgctggtgaacac
cggccagagagggattttgcatccagtgaagtcgcagctgacagcgatgatgatgatagt
gacgaagcagaggaggatggtgacgatgatgattgggacagtggtgctcgaaggagaaat
ctcagagagccagccagagtgccctcaagcagagagaggtctggagcatcctgtcaaccc
cagcagcaacacatcccttcccttttgtctccacagctccgccaaccaacacctccaccc
tccccgcctccagagttatcattccccttgcctgacacccctaaacagagccctccgagt
ccagatgtagctccccctaggcactcacccagtacctccagctctggctcctctagcagt
ggcagccgcagcagcagcccagagccacagaggagtggacataatgagcgcaagcccggc
ccactgaccctcctggcacgtaaaatggagtcagaaggtgcgttctcaggagcaggttgg
catggcggtgatgtggaaggcgataggcgtgataacagttcgccttcagccacattgttt
ccaagcagagggcctccagagggtctggtatctgccatcacccacacagccaacactgca
ggccatatgccatttcccatgattccaggcacaaaccaaggtgtcacaggggcacattca
gcccatattcaagtacctgtgagtgtacttaaagccaatacgacaggagagagggacaga
cagagggaattggagatagaaagagaagagcttgagaggcagagaaaacttgagcaagag
aaagcaatggagttggagcgggaaagagctcttgcacttgagcgtgaggagaagcagaga
gctttggagagagagagaattgagcgacagcaggccttagaaagagaggaacgagaaaaa
gccttacagctggagagagcgcttgctcttgagcgagagagaaaggagagggaacttgtc
cttgagcgagagaggcaggagagggaacttgctcttgagcgagagagactggagcgggaa
ctagctttggctaaagagagggaggaacgagagcaagccttagccagagaaagaaaggag
agggaacttgtccttgagcgagagaggcgagagagggaacaactagctttggctatagag
atggaggagcgggagcaagccttagcacgagagagggccctggagcgacagaaggagctg
gaaagacagagggttctcgagcaagagcgtttacagagagaaagggaggatagggagaag
agagagagggaagaaatggagagggctatggagctagaaagagctaaggctttggagagg
gaaaggcaggagagagaaagggcaattgagcaggagaggttggagagggaaagagctttg
gaggctgagagacggcagagatttgaaagagagaaggctttggagcaggaaaagttagaa
agggaaaggttagagagggagaaagccttagagcatgagagactagaaagggagagagcc
ctggagcaagagaagatagaaaaagagaaagctttagagcaggagagaattgagaaagag
agaaccttagagagggagagaattgagcgagagaaagccctggagttagagagaatagaa
agagaaaaggctttaaagcaagaaaggttggagagggagagagccctagagcttgagagg
aaggaaaaggagagaattgaacaagagagaggattggagcgagagaggatagggagagaa
aaggccttggaacgagaacgggaggaaaaagagagagcagagaggaagtcagctctagag
aaggaaagagctgaaaggctagagggggagaaactagaacaggagcgagccttagagaag
gagacgaaggagaaagagagagccctaaaggaagagagggaaagggctctcgaacgccaa
cgaaaagaaaaagaggaacaggagaaagagcaagctaggatggctgaaaaggagagagag
agtcacctccctccatccaaacgtggccgtgagattggtctcacctccctgcccactcct
ccctccctctccacaggacaagctagaaaattatcgacggaggcaggagcgcaggaagat
gtccatgctcaaataccacggagtgaaagccaagccgcagaatccagttcacccatgtca
ccaacacctctgtcacaacagtcatcatttaagaagttccggttcttaagggactctcca
attcagccacagccttcctccacttccatggttatcaagaggcccaggaccttctctgac
accccccagccccaggcctcacctgtcctctccccctccagtgttgcggaacaactacag
caggaaggacacaggccctctgctggacaagaagatcgaaagatgcagataaaaccagag
gttgtcgctgagccaccaggacccacaaagaacgaggctgcaaaacctgtaccagatgac
aaagaacaggcagagtcggtgaaggctgaacatgctgccaaggattccacccaaaaagtg
gatgaaagcaagaaccgttcaagcccactagcccagcgggagggtagggatgctaagaag
caagagaaaccaacaagacgaagatcaacatccaacgattcctcctcctcagggtctggc
tctgagtcctcatcatctcggtcctctagatcgtctgcatcttctcaagaggaaacttcc
tcctccagaaatagaagggaggtgaaacctgtaagagactcttcaccaccgcacaggatg
actgtggagattcttgctgagggttctaaagaaatcccagaagccactcctcccaaaaga
gcggtatctggagaaatgagtaacacaactgcatatggagacagccacatcaagaaacct
ttcgttgaagctgcacctggagaggagacacaaagaaaaagaacagacagtgaaagagaa
gaggaaaaggacaaacaaaggcaggtgaaggagactggcatggcagagtcagagaagctt
caagagaacagcgaggagacaccaaaggccttctccgctcgtaagatctctcttagcagc
aacaaattgtcgccaggccccggcagtgtggagggagagcaggagtctggggctgcggcc
ggtcgcaagaggcggtggggttccagcacagctgtcactgccaagaagccttccatcagc
atcaccacagactcactgaagtctctgatcccagacatcagaccatgtcttggtcaagag
gcaatagtggatctgcacccagaggaagctgtcctctctggggttgaggatgaagagagg
gaacgctctgaccaggaccttcaaatccgtcgcactgtcacacaggtggtgcacttggag
agcaaggagaacggacagaaagaggtgaagaggagcagacatgaggatctggaggaggaa
gatctacaggaagagaaagacagaggaatgacgcttgaagagaagatggacgtctcattt
cctggagcagtggaaacccaatcaccatcacatacaggccatgatgtagaaatcaacact
gtgacccccagcgacaccctcattcgtcgctccattagccagcagaaaacgggtgtctcc
atcacaattgatgaccccgtccgcacgtcccagcagccttcaccgcctcgtggcaaagtc
tccaacatagttcatgtctgcaacctggtgcggccatttactttgggacaactgaaggag
ttgctcagccgaacaggcactctggtggaggacagcttctggattgataaaatcaagtcc
cactgctatgtcacttactcgtgctccgaggaggctgttgccacacgggaagctcttcat
ggagtgaaatggcctcagagcaacccaaaagtccttagtgtggacttctgccagcaagat
gagctggacttccacaaaggcctggtgatggccgacagaactggagcagaggaacagggg
cctggcactggtcgtggtcgaacatcaggcctgccctctctcctccctgagcgagaccag
tgggctgagcgtgagcgtgaaatggagcgccgggagagggccaaagcagagcgggagtgg
gatcgggacaaggttaaagagttcggcaaacctgggtcagagaaggagggaggtcctaga
aggtcgcgctccagagaaagaaaacgtaaagagaggggaaagagcaaagacaaaaagact
gaaaaaaaggagaaagcagctgaggatcctccagcaaagctgcttgatgacctgttccga
aaaactaaagcagctccttgcatatactggcttccacttaccgatgaacagtttatccag
cgagaaactgccagagcagaccgggcgaaggagcgagagaaacggaggaaggagcaagag
gaggaggaagagaaaaaaagggaagaagaacgaaaagagaggatgaaagctggaggtgga
acaacaggagaccggagtgagggtgagaaggacaaggacagagaaagagacagaggtaga
gagagggacagggagagggagagggaaaatgataaacgcagggatggcttcagaaggcag
gggggcagcggggcaggtggcggcagcagccgacgctcacgcagccgcagcgacccgcga
gaaagacggcgctaa
DBGET
integrated database retrieval system
