KEGG   Pleuronectes platessa (European plaice): 128454370
Entry
128454370         CDS       T09923                                 
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
pplt  Pleuronectes platessa (European plaice)
Pathway
pplt04510  Focal adhesion
pplt04512  ECM-receptor interaction
pplt04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128454370
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128454370
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128454370
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pplt04147]
    128454370
   00536 Glycosaminoglycan binding proteins [BR:pplt00536]
    128454370
Exosome [BR:pplt04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   128454370
Glycosaminoglycan binding proteins [BR:pplt00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   128454370
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 128454370
NCBI-ProteinID: XP_053293729
LinkDB
Position
13:complement(11875164..11901136)
AA seq 1676 aa
MWRPLLVFPLMVFAVMLSGTGAKNCVCRRKSRCHCEGVKGSRGDKGLQGVPGPTGLDGRQ
GPTGHAGPMGAKGKRGSDGHVGPKGNPGPDGKEGFAGSHGLPGIPGLQGPPGPLGAPGCN
GTNGDDGPPGIHGALGINGKPGHPGLHGPKGESRRATNSVQRPPGPPGPPGRDGKQGAPG
PRGETGPSGDPGPRGNFGFPGRPGAQGSKGHGGTGGIRGPQGPKGRPGPHGQPGPPGRIR
QFFTDLQQQIEALKGDRGDVGEKGCRGEPGDVGYGFYSKGAKGDKGQQGPEGASGRDGDP
GQGHKGNPGHQGEPGNPGTAGGTGAKGDRGPSGPPGYIHGPVPEPLKGYQGDPGPPGTPG
LPGLQGVVGFPGQEGLPGRASGFYVPGPRGHNGFPGSKGDPGEPGDIYTGLPGLEGDPGD
GGLPGDQGPPGLSEDRTNRITTGVPGMKGIRGIPGAPGYAGTFGIKGEKGESFSQCTGSR
HPGLPGPPGPQGIPGYNQGPGANGDSGFPGPKGVPGRPGPIGDSGFQGPPGQKGDSYSYH
TPGIKGEIGGPGQPGKPGANGLPGTPGLPGLKGYQGPPGDSYPSTGVERDKGFPGPPGPL
GHPGPVGFPGPVGHGHAGHPGSKGDIGVPGHQGLPGIPGQKGEPIHIHTKGLPGPPGFKG
LPGVPGNRGDHGVQGTPGLPGTPGEKGERGDLAFPGKLGIPGPKGEKGRPGLPGLPGMGL
PGQPGSQGPPGVPGLKGDSGPGKRGSPGLPGFPGEPGEQGPIGDSGNPGLPGNPGLNGNP
GLPGGKGSQGSIGPPGLPGSKDSCNCLSGPEGPPGPNGNPGLPGPNGLPGEKGNQGLAGS
GHPGPRGQPGSPGSSVAGSRGLPGQKGIMGRNGLTGKPGLRGDPGPEGLPGYGLMGLPGI
LGPPGQIGSPGPDGAKGSQGPPGMDGEPGPRGPPGTGSPTPIEIIGPPGDPGYIGPPGQT
GTHGDTGSTGPKGQRGTEGGPGGPGPKGPPGAPGIDGAACSKGSQGPAGVLGDPGFSGPP
GLKGTKGDQGNTGGPGLVGKTGPTGYKGVNGETSYSGYGLPGPAGQKGEPGSGNSEVMKG
QKGEPGISGPVGVPGSSGARGNPGPVGKNGLQGYQGAKGSDGPTGLKGHPGPHGSPGKRG
LWGVAGSTGPKGNQGRDGIPGPPGQKGETITEGTPGRRGDTGLPGPQGNPGPPGLSVTAS
PGPTGDRGLPGARGVKGPRGPACRKGACLPGLKGDRGHPGFPGRRGSPGLPGPPGPTVAG
LKGDRGHMGPSGLPGYCGPQGDQGLQGPTGARGRPGGPGPIGDSGSPGFQGPRGGTGDPG
YIPGLPGPPGHKGLPGQPGPKGEPAFGKVIYEPGPPGLPGPSGNHGSPGSTGVSGPPGHQ
GQPGIKGVRGSSPLGLPGFPGRKGDTGRAGFPGPEGRAGDPGLKGPSGLPGRGFSCHTDS
FLIARHSQSIHVPDCPHGSILIYSGYSLLFINGNEKAHGQDLGTMGSCLPRFSTMPFLFC
DTESNCRYASRNDYSYWLSTDAPMPTNMVAIAGDKLVSYISRCSVCETTSNVIAVHSQTT
RIPQCPQGWESLWTGYSFVMQTGVGADGSSQPLVSPGSCLESFRQVPFIECHGKGTCNYY
PDSYSYWLASLDPNNMFSKPVPRTVKGPALESVVSRCQVCRKPVQARPGDGRGDSF
NT seq 5031 nt   +upstreamnt  +downstreamnt
atgtggaggccactgctcgtgttccctctgatggtgttcgctgtgatgctgtcaggcacc
ggggccaaaaattgtgtgtgcagaagaaaatccaggtgccactgtgaaggagtgaaaggc
agcaggggagacaaaggtttacaaggagttccaggtcccacaggactggacggccgtcag
ggaccaactggtcatgctgggccaatgggagcaaagggcaaaagagggtctgatggacac
gtgggaccaaaaggcaatccgggacctgatggcaaagaaggatttgctggatctcatggt
ttaccgggtatcccgggtttacaagggcctccgggacccctaggggccccaggatgcaat
ggaactaatggagatgatggacctcctggaatccatggggccctcggtattaatggaaaa
ccaggtcatccaggtctgcatggacctaagggtgaatctcggagggcaacaaattcagta
caaaggccacctgggccacctgggccacctgggagggacggaaaacagggagccccaggt
ccccgtggagagactggaccatctggggaccctggaccaaggggcaattttggctttcct
ggccgtccaggggcccagggatccaagggtcatgggggcacaggtgggatccgaggacct
caaggaccaaaggggagaccaggaccacatggacaaccggggccaccaggtcgaattagg
cagttttttactgacctacagcaacagattgaggctctaaagggagatagaggagatgtg
ggagaaaaaggctgcaggggcgaaccaggagacgtcggttatggcttctactccaaagga
gcaaagggagacaaaggacagcagggtccagaaggagcgtcagggagggatggggatcct
ggtcaaggacataagggaaaccctggccaccaaggtgagccagggaatccagggaccgca
ggaggaacgggtgcaaagggagatagaggtccttctggtccaccgggatatatacatggg
cctgtgcctgagccactcaaaggatatcagggagatcctggtccccctggaacacctggg
cttcctggtcttcagggtgttgtgggcttccctggacaagaaggactaccaggccgtgca
tctggcttttacgtgccaggcccacgcggccataatggctttccaggttccaaaggggac
cctggggagcctggggatatttatactggactcccaggtctagaaggagaccctggtgat
ggaggtcttcctggggatcaaggcccacctggactttcagaagacagaactaacaggata
accacaggtgtcccaggaatgaagggaatcagggggatacctggagccccgggatatgcc
ggaacttttggaataaaaggagagaaaggggagtcctttagtcagtgtaccggatcacga
cacccaggcttaccaggtcccccggggccacaaggcattcctggctacaatcaaggacca
ggtgccaacggagattcaggcttcccaggacctaaaggtgtacctggaagaccaggtcca
attggtgattcgggatttcaaggtcctccaggacaaaagggagactcatattcctatcac
accccagggataaagggagagataggaggcccaggacagcctggcaaacctggtgcaaac
ggtctccctgggactcctggattaccaggtctcaaaggatatcaaggccctccaggggat
tcatatccaagcactggtgtcgagagagacaagggttttccaggtccaccagggccttta
ggccatccaggaccagttggcttccctggcccagtaggacatgggcatgctggacatcca
ggaagtaagggagatattggtgtacctggccaccaagggctgcctggaattccaggccag
aaaggggaacctatccacattcacaccaaaggactccctggaccacctggatttaaaggt
ctgcctggtgttcctggaaaccggggtgatcatggagtgcaaggtaccccaggcctacca
ggcaccccaggagagaaaggagaaagaggggatctggcatttcccggaaagctcggaatt
ccagggccaaaaggtgaaaaggggcggccaggtctcccaggtcttccaggtatgggcttg
cctggtcagccaggttcacaaggccctcctggtgttccgggactgaagggggatagtggc
cctggaaaacgtgggtccccaggcctgccagggtttccgggagaacctggcgagcaggga
cctataggagattctgggaatcctggtttacctggaaacccagggctaaatggcaaccct
gggcttccaggaggaaaaggaagtcaaggctctataggaccccccggactacctggtagc
aaggattcatgtaattgtttatctggaccagagggaccaccaggaccaaatggtaatcca
ggacttccagggcccaatggcttgcctggtgagaaggggaatcaaggtttagcagggtct
ggtcatccggggccccgtggtcagcctggttcccctgggtcatcagtggcgggctcacgt
ggacttcctggacaaaaagggattatgggacgaaacggcctgactggtaaaccaggactg
agaggagacccaggaccagaaggcttaccgggatatggattgatgggattgcctggaatt
ctaggaccaccaggccaaataggttcccctggccctgatggagccaaaggttcccagggt
ccgccaggcatggatggagaacctggtcccagaggtcctccaggcactggatcaccaaca
ccaatagaaatcattggacccccaggagaccccggctatattggtccccctggtcaaact
ggtacccatggagacactggaagtactggaccaaaagggcaaagagggacagaaggagga
ccagggggtcctggaccaaaaggtcctccaggtgctccaggtattgatggagcagcgtgc
tccaaaggaagtcaaggacctgctggagtcctgggagacccaggatttagtggacctcca
ggcctgaaaggcacaaaaggagatcaaggtaacactggagggccgggtctagtcggcaaa
actggtccaacaggatacaaaggggttaatggagaaacaagttactctggatatggactc
cctggaccagccggacaaaagggtgaaccaggatcaggcaatagtgaagtgatgaaaggt
cagaaaggagaacctggcatcagtggaccagtaggtgtaccaggaagttcaggagccaga
ggaaacccaggacctgttggaaaaaacggtttacaagggtatcaaggagctaaaggttca
gatgggcctacgggacttaaaggacacccaggacctcatggttcaccaggcaaacgagga
ctgtggggtgttgctggttctacaggtccgaaaggcaaccagggcagggatgggatccct
ggaccaccaggacaaaaaggggagaccataactgaagggactcccggaagacgtggtgac
acaggtctaccaggtccccaaggaaaccctggtcctcccggcttgtctgtgacagcgagt
cctggaccgacaggagaccgaggacttccgggcgcacgtggggttaagggtcctcggggg
ccagcgtgtagaaaaggggcatgtttaccgggattaaaaggagaccgtggccatcctgga
tttcctggcagacgaggctctcctggtttacctggccctccaggtcccactgtagcaggg
ttaaaaggagacagagggcacatgggtccttcaggtctccctggttattgtggtccacaa
ggagatcaagggcttcaaggaccaactggtgcaagaggacgacctggaggcccagggcca
ataggtgactcaggttctcctggattccaaggccctcgaggtgggacgggagaccctgga
tacatcccaggcctgccaggaccaccgggacacaaaggattacctggacaacctggccct
aaaggcgaaccagcgtttggcaaagtaatatatgaaccagggcctcctggcttacccggt
ccttctggaaatcatggatccccaggaagcacgggagtgtcaggaccacctggccatcaa
ggccagccaggaatcaaaggggtgcgtggttccagcccactcggcctgccgggttttcct
ggccgcaaaggagacacaggaagagccgggtttccaggtccagaaggtagagccggagac
ccaggtctcaagggtccttcggggttgcccggtcgaggtttctcatgtcacactgacagt
ttcctgatcgcgagacacagtcaaagcatccatgtccctgactgccctcatggctccatc
ttaatctactctggatactccctcctcttcatcaatggaaatgagaaagctcatggtcag
gacctcggcacaatgggaagctgcctccctcggttctccaccatgcccttcctgttctgt
gacacggagagtaactgccgctacgcttctcgaaatgactactcgtactggttgtccact
gacgctcccatgcccaccaacatggttgccatcgcaggggataaactggtctcctacatc
agcaggtgctcagtgtgtgaaaccacctccaacgttatagccgtccacagtcagacaact
cgtatacctcaatgtccacagggatgggagtccctgtggactggatactcatttgtcatg
caaacaggcgttggtgcagatggctcctcccagcctctggtttctcctggctcatgtctg
gaaagtttccgccaagtgcccttcattgaatgtcacggcaagggaacatgtaactactat
cccgactcctacagctactggttggcctccctcgaccccaacaacatgttcagtaaacct
gttcctcggaccgtcaagggacccgctctagaaagtgttgtcagccgttgtcaagtctgt
aggaaaccagtacaggctcgtccaggcgacggacgtggggacagcttttaa

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