Pleuronectes platessa (European plaice): 128454462
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Entry
128454462 CDS
T09923
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128454462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128454462
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128454462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
128454462
NCBI-ProteinID:
XP_053293845
LinkDB
All DBs
Position
13:complement(22583825..22610728)
Genome browser
AA seq
2525 aa
AA seq
DB search
MAAVLLQVLERTELNKLPKGAQNKLEKFVTELQNANEALKTLHERFKADSEQQYFDVEKR
LSESQEQILSATRDLQTLKEENKKLNEELSTLKGIEGETFQDKTPQPQTKTKYEIEAEKR
ELARLLEKRTQEVENLTQDVNRLNEKLTETSKVKMELQLKLDEIQSSATSLQHREKRTEQ
EKELLEKKIEWSTTELKNKTDELLNTNREKGKEILELQSSLKNTKEQVTTLESQLMSLKQ
TSESQSKRADDLNNKLKQAKDERSAMEEKYRNELNAHIKLSSLYKGAATDMETKNQELCR
AVEELSKVVKHTGEANKTLEKKVSEGAELKTQLEAELKEKIKKMEKELENVTMKASGKHC
CVPSLTDEQLDQMCPSAAAIAAIVKPGMKFFDLYNAYAECQTHLQLEKQETNRVSRVLDE
IVQEVESKAPLLKRQRQEYEGMQRSMASLCNKLEQARMEIHGLQKEKEETKQRCEALDRE
KLRVERQLDDTSTQVCVLLAELEEARGNRVIKTDSSSADISSTSEVNNPRQLSFRSVEEL
QKQNQSLLGRLRELEQEKDREQSRVTSARVSELEASVDKLQKEVEHLREQRNQQKQLADS
NARQRDMYKALLTHSTGFSLPPQGLESSSQPANVRPSAPGTRSTPQRAAAVEAAQSTQAK
AALKQLNDAFSLYKKEKAENDRMLNETNDRLQSQITELSSSHAKLTSQLEFSNKRYEILQ
ETVSAYRREITALQDRNQKMSATAQRHEHIIHTMTQDMRQANEKLSLEEVRVVNVTKEKD
MLRQAESRLTREKEAILAEQRNQNLLLTNLKTIQLTMERAETETRQRLNNKIEHLEEELA
SMKSRMDQEVAQRHSLGRTMDAQLLEAKKQLETQNILQQRTRELLRSSEQQVATLKTQLA
SASSSEAVTSSSNTTTTATRAAPVRAQLRVRPQAPAASQQPPSQSEQEIAEVRGLLRTAE
EQNSELAEQLKNANATVDQYRAVVLTLEDSLKKEKESRSPLEIRLKESEEVQKQLEKRIV
EVEKMKQREQDEGRKAVDAVEKQVFELQRSLKTSQTEQQEALERAAASLTQEQKATQDSL
LQTKLASEAQSKYERELMLHAADVEALQELKKRIQQDVAQKRELEEQINKTSSLLQEKTA
ALNTLEKQLKDDLSTQSRRCEELGKQNALLHQQMDDMASKSRQQQQQQQLDLSFSEEGKT
TEQILEILRFVRQEKQIAVAQCEVSEGESLRYKQRVEHQDRELKELQDTLNAERQKMQAT
AKTLVQQEEQLKKMSTISTLQENNRMLKMNRDKLQQELQQAQAKVTKLQSDISPLHNSLS
LLSEKNGSLQADKRLLEEDLKHWKAKAQLLASQRKDGDVEEKQKLTNEREAQQRRIAQLA
EETAKLKTELARSSASSNSTQSQLQGIRDSVAQQISEKENLKKDLETKKNEILEKNKTIT
QVKKIGRRYKTQYDELKVQHDKLVAETASKAGSEAGPSQEVQQELAKAQEELNKAREELK
TLKEDVQKKQQETQKALQELEEAQKENQKTKEKSQEVQNQITKNQNQLTQLQSQLSQTQS
QLQQNQNQLTQSQKELQQAKNHTQQIQNQLKSAQTQAQARQSQNQLLQKELQQVKEALQQ
SLASQKELQQTHQTNQQSHNQEVNNLKTTLSQSEGKATELQGQLDSLQKTVGEREADIKR
LQEQLNEANQANDASQASQAKSFQASDANTGGDTNKAQQEEVAKLRQELLDCKNKEEQLR
QQISDKEEKTKKAFMGAKTKISQLINAKEQLIKETEELKQNKEELEGRVNALKSQYEGRI
LRLDRELRELRETQSQSEPREEPQEQSGSKVMDQPRSADQRQISLKSPAQDRGGSSLSDP
PTANIRPTPSTPSPSNKPSPSPGNKATPRASIRPMVTPATIPIPTPTATVMPTTQSDSQE
VLISTGVAVHSTTSSLVSTPNSITQPASLQATAFVQPTQQQAVSQEAGSSMDTERPSTSS
SLIGAAGSKRAREEEEEGQEEEEEEESRPESSHTSPTTKKLRLKPSIALEMEGDEEMEGE
LRDEGEQQDSPDDSQELPEEGFPILAEDEEDIEEEGVSQSVPSYQMLSQGSAIIRDVIVI
DTDSESRESKDGEEKREDEEDEDEEEGDEYKEEEEDDEDEDDAGDGEMRGGDESNERSGA
EDEGEEEDPSEATNAEEDVCGASSDSQHASEPQQSSEGSSSATSESDPVRDLVHLPPTSS
SIFSPSYSPLTPRLPHPRRPTHSLPPRLYIQPPPPELGPPHMQRQSSQLRRTSVGRGLQL
TPGIGSTQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGLSTRFRFGPPEDLLPQ
TSASHSDLGQLASQGGLGMYESPLFLAAHDEDGGGRSVPTTPLQVAAPVTVFTESLPSDS
GDNMASQSVPMVTASTGMASAAEDIDEVFVEQEAEGPGIESSLESQTDMESTGQQSDDAS
LPSTSQDPDTSSVTQRRMMSSQSPISSLSGRGTRGGRGEARMFISRRGTYSRGGRGGAMG
RGGIA
NT seq
7578 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgctgctgcaggtcctggagcggacggagttaaacaaactcccgaaaggc
gcccagaacaagctggagaagtttgtgacggagctgcagaatgctaacgaggcgctgaag
acactgcacgagcgcttcaaagcagacagcgagcagcagtactttgacgtcgagaagaga
ctgtcagagagccaggaacagatcctgtcagccaccagagacttgcagaccctgaaggag
gaaaataagaaactcaatgaagagctgagtaccctgaaaggaatagagggcgagaccttt
caagataaaactccacagccgcaaacaaagaccaagtatgagattgaggcagagaagagg
gagctggcgaggttgctggagaagagaacacaggaggtggagaaccttacacaggatgtg
aatcgtctaaacgagaagctgactgagacaagcaaagtgaagatggagctgcagttgaaa
ctggatgaaatacaatcatctgcgacgtcgctacagcatcgggagaagcgtacggagcag
gagaaagaattactggagaagaaaattgagtggtcaaccacagagctgaagaacaagacc
gatgaactgctcaacaccaacagagaaaaaggcaaagagatactggagcttcagagtagt
ctgaagaacaccaaggagcaggtgaccacactggaaagtcagctcatgtctttgaagcaa
accagtgaaagccaaagtaagagagctgatgacctcaacaacaaactcaaacaggctaaa
gatgagcggagtgccatggaggagaaataccgcaatgagctcaatgctcatatcaagttg
tcttcactgtacaagggggcagcaacggatatggagacaaaaaatcaagaactgtgcaga
gctgtggaagagctcagcaaagttgttaaacacaccggggaggccaataagactctggag
aagaaggtgtctgagggagcagaactgaagacgcagcttgaggcagagctgaaggaaaaa
atcaagaaaatggagaaagagctggaaaatgtaacaatgaaggcttctgggaaacactgc
tgtgtaccatctttgactgatgagcagctggaccaaatgtgtccttcagcagctgccatt
gctgcaattgtaaagcctggcatgaagttctttgacctgtataatgcctatgcagagtgt
cagacgcatcttcagcttgagaaacaggagaccaacagagtgagccgagtgctggatgag
atcgtccaggaagtcgagtccaaagcgcctctcctgaaacgtcagagacaggagtatgag
ggcatgcaaaggtccatggcttccctgtgcaacaaactggaacaggctcgaatggaaatc
cacggtttgcaaaaagagaaagaagagaccaagcaacgctgtgaggccttggacagagaa
aaactgagggtagaaagacagttagatgatacatctacacaggtgtgtgttcttctggcc
gagcttgaggaagccagaggtaatcgggtgatcaagactgacagcagctctgccgacatt
tccagcacttctgaagtcaacaacccacgccagttgtctttccgcagtgttgaagagctg
caaaagcagaaccagagccttctgggaaggctgagggagctggagcaggagaaggacaga
gagcagagccgtgtgacttcagcacgtgtgtctgaattggaggccagtgtggataaactc
cagaaggaggtggagcatctcagagagcaaaggaaccagcagaaacagctggctgactcc
aacgccagacagagagacatgtacaaggctctgttgactcacagcactggcttcagcctg
cctcctcaaggtctagagtcctcatcccagcccgcaaatgttcgtccttcagccccagga
actcgctctactccacaacgagctgcggccgtcgaggcagcacagagtactcaggctaaa
gctgctttaaaacagctcaacgatgccttcagtctgtataaaaaagagaaggcagagaac
gacaggatgctgaatgaaacaaacgacagactgcagagccagataacagaactcagctcc
agtcacgccaagctgacttctcaactggagttcagcaacaagaggtatgagattctccag
gagactgtatcagcctaccgcagagagatcactgcccttcaggacagaaaccaaaaaatg
tctgctacggcccaacgacacgagcacatcatccacacaatgacccaggacatgcggcag
gctaatgaaaaactgtcactggaagaggtgcgtgtagtgaatgtgaccaaagagaaagat
atgttaagacaggcagagagtcgactgactcgagagaaggaagcaatactggctgagcaa
cgtaaccagaacctactgctcaccaacctcaagacaatacagttgactatggagcgagca
gagacagagacccgccagcgactgaacaacaagatcgagcatctggaggaagagctagct
tccatgaagagcaggatggaccaggaagttgctcaaagacattccctcggacgaactatg
gatgctcagctgttagaagccaagaagcagcttgagacccagaacatcctgcagcagaga
accagggagttgttgcgcagctctgaacagcaggtggcaacactgaaaacacagctggct
tctgcttcatcctctgaggctgttaccagctccagcaacaccaccaccacagctaccaga
gctgcacccgtcagagctcaactgagagtacgccctcaagcgccagcagcctcccagcag
cctcccagccaatcagaacaggagattgcagaggtgagaggtcttctccgtactgctgag
gaacagaacagtgaactggcagagcagctgaagaacgccaatgctactgtggatcagtac
agagccgtggtactgactctggaagacagtctgaagaaagaaaaggagtcccgctccccc
ctggagatccgtctgaaggagtcggaggaggtgcagaagcagctggagaagaggattgta
gaggtggagaagatgaagcagcgggagcaggatgaggggaggaaagctgtggacgcggta
gagaaacaagtgtttgagctgcagcgcagtctgaagaccagtcagacggaacagcaggag
gcgctggagagagcagctgcttctcttactcaggagcagaaggccacacaagacagtctg
ctgcagactaagcttgctagtgaggcgcagtctaagtatgagcgggagttgatgcttcat
gctgctgatgtggaggctctgcaggagctcaagaaaagaattcaacaagatgtggcccag
aagagggagttagaggagcaaataaacaagacgtcctccctcctgcaggagaaaactgct
gcattgaacacactggagaaacagctcaaggatgacctgtccactcagagtcggcgctgt
gaggagctggggaagcagaatgctctcttgcaccagcagatggatgacatggcctccaag
agtcgtcagcagcaacagcagcagcagctcgacctgtcattcagtgaggaaggaaagacc
actgaacagattctagagatactcaggtttgtgcggcaggagaaacagatagctgtggct
caatgtgaggtgtcggaaggagaaagtcttcgttacaaacagcgagtggaacaccaagac
agagaacttaaggagctacaggacaccctgaatgctgagaggcagaaaatgcaggctaca
gctaagactctggtccagcaagaagagcaactgaagaagatgagcactatcagtacacta
caagaaaacaacaggatgctgaaaatgaatagagataagctgcagcaggagctgcaacaa
gcgcaggctaaagtgacaaagctgcagtcagacatcagtccactgcacaactctctgtct
ctgctgtcagaaaaaaatggctccctgcaggctgataagaggcttctggaagaagacctc
aaacactggaaggccaaagcacagctgctggccagccaacggaaagatggagatgttgag
gagaaacaaaaactgaccaatgagagagaagctcagcagagacgcatcgcacagcttgct
gaagagacagccaagctgaagactgaactggccagatccagtgccagcagtaactcaact
cagtctcagctacaaggcatcagagactctgtggcccaacagatatcagagaaagaaaat
ctgaagaaagacctggaaacaaaaaagaatgagatcctggagaagaacaagacaatcacc
caggtgaagaagatcggacgacgctacaagacgcagtatgatgagctcaaagtccagcat
gacaagctggttgcggaaacagcatctaaagcagggagcgaggcaggtcctagtcaggag
gtgcaacaggagctggccaaagctcaggaggagctcaataaggccagagaggagctgaaa
acactgaaagaagatgtgcagaagaaacagcaagagacccagaaggccctgcaagagctt
gaggaggcgcaaaaggaaaaccagaagaccaaggaaaagtcccaggaggttcaaaaccag
attacaaagaaccagaaccaactcacacagttgcagtcccagttgtcgcagacccagtct
cagcttcagcagaatcagaaccagctgacccagagtcagaaagagcttcaacaagccaag
aaccacacccagcagatacaaaaccagttaaaatcagctcaaactcaagctcaggcccgt
cagagtcagaatcagctgctccagaaggagctccagcaggtcaaagaagcgctccagcag
agcctcgccagtcagaaagagctgcaacagactcatcaaaccaatcaacaaagccacaac
caggaagtcaacaatctcaagaccactctaagccaatcagagggcaaggcgactgaactc
cagggacagctggacagtctgcagaagactgttggtgagcgtgaagcagacatcaagcgt
ctgcaggagcagctgaatgaagctaaccaggccaatgatgctagtcaagcatcacaggcc
aagagtttccaggccagtgatgctaacacaggtggtgacaccaacaaggctcaacaagag
gaggttgctaaactcagacaagagcttttggattgtaagaacaaagaggagcagctgaga
cagcagatttctgataaagaagaaaagactaagaaggccttcatgggagctaagaccaaa
atcagccagctcatcaatgccaaagagcagctcattaaggagacagaagaactgaaacag
aacaaggaggagctggaggggagagtaaacgccctcaagtctcagtatgaaggtcgaatt
cttcgcctggacagagagctgagagaactgagggagactcagtcacagtctgagcccaga
gaggagccacaggagcagagtggctctaaggtgatggatcagccgagatctgcagaccag
agacagatatctttgaagagtccagcccaagacagaggaggctctagtctgtctgatcct
cccactgctaacatccgcccaaccccaagtactccctctcctagcaacaagcccagcccc
tcccctggcaacaaggccaccccccgggccagtatccggcctatggttaccccggcaacc
atcccaatcccgacacctactgccaccgtcatgccaaccacacaaagtgacagtcaagag
gtgctaattagtacaggagtcgctgtacactccaccacctccagtctggtgagcacaccc
aactctataactcaaccagccagcttacaagccacagcttttgtccagccaacccagcag
caggcagtcagtcaggaagcaggttccagcatggacacagagcgtccatccacgtcctct
tctctgattggtgcagcaggttcaaagcgagccagagaggaggaggaggagggacaggag
gaggaagaagaagaggagagcagaccggagagttcccacacatcaccgaccactaaaaaa
ctacgactaaaaccatcaatagcactggagatggaaggtgatgaggagatggaaggagaa
ctgagggatgagggggaacaacaggattcaccagacgacagtcaggagcttccagaagag
ggtttccccattttagctgaagatgaggaggacattgaagaagaaggcgtgtcccagtct
gtcccctcttaccaaatgttgtctcagggctccgctataatccgagatgtcattgttatc
gacacagacagtgaaagccgagagagcaaagatggggaggagaagcgggaggacgaagag
gatgaggatgaagaggaaggagatgagtataaggaggaagaggaagatgatgaagatgag
gatgatgctggtgatggtgagatgaggggaggagatgaaagtaatgagaggagcggggct
gaagatgagggagaggaggaagatccatcagaagccaccaacgctgaggaggatgtgtgt
ggagcgtcgtcagactcccagcatgcctctgagccgcagcagagcagtgaaggcagcagc
agcgccacatcagagtctgaccctgtccgagaccttgtacacctccccccaacttcctcc
tctatattctcaccctcctactccccccttacaccccgcttgccacacccccgtaggccc
acacactccctcccaccaaggctttacatccaaccaccgcctccagagctgggaccccca
cacatgcagagacagtcctctcagctccgtagaacatcagtaggacgtggacttcaactc
acccctggaatcggcagtacgcaacatttctttgatgacgacgacagaatggttcccagt
actcccactctggtggtcccacatcgcactgatggctttgctgaggctatacattctcct
caggtagcaggtctctctaccaggtttagatttggtcctccggaagacctgctgcctcaa
acatcagcatcacactctgacctgggacaactggcctctcaaggaggtttgggtatgtat
gagtctcctctgttccttgctgctcatgatgaagacggaggaggaaggagtgtccctaca
acgcctttacaagtggctgccccagtgacagtcttcaccgagtcgctgccttcagacagt
ggtgacaacatggcctcacagtctgttcccatggtcacagcctccacggggatggcttcc
gctgcagaggatatagatgaagtgttcgtggagcaagaagcagagggacctggtattgag
tcgtctttggaaagccagacagacatggagtcaacagggcagcagagtgatgatgcatca
ctgccatctaccagccaagaccccgacaccagcagtgttactcagcggcgtatgatgagc
agccaatccccgatcagtagcttgtcaggcagagggaccagaggagggaggggggaagcc
aggatgtttatcagccgcagagggacttactctcggggaggaaggggaggagccatgggc
agaggaggcattgcctaa
DBGET
integrated database retrieval system