KEGG   Pleuronectes platessa (European plaice): 128454610
Entry
128454610         CDS       T09923                                 
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
pplt  Pleuronectes platessa (European plaice)
Pathway
pplt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128454610 (prpf38b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pplt03041]
    128454610 (prpf38b)
Spliceosome [BR:pplt03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    128454610 (prpf38b)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    128454610 (prpf38b)
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 128454610
NCBI-ProteinID: XP_053294022
EnsemblRapid: ENSOESG00000024427
LinkDB
Position
13:complement(13110871..13116236)
AA seq 483 aa
MANVGNQPPQQAVNKPAPGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHAEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKMTR
KQVMGLITHTDSPYIRALGFMYIRYTQPPADLVDWYDGFLDDEEELDVKAGGGCVMTVGE
MLRSFLTKLEWFSTLFPRIPVPVQKMIDQQMKARPRKIAPKETPEEDATFTGEAGRQGEK
RHSRTPRRSPSPRRSPKRSPKRSPKRSPKRSPKRSPKRSRSSSHHREKERHGPSFDRELD
RERDRQKKEREGKDNHRDKDRDRQRRRSRSADRNQERRERRRSRSGSRDRRSERKDRERD
GVDDRSKKKERDNHKDRGTENEKSRDKKSRGENDDRRHKEDRERRREEKRAKKLSRSRSR
EKKHKSGEEKNRKRECSHSREKDRDGEQRSHKRSGSKEKSHHQRESNNDHCKHGERRRSQ
STE
NT seq 1452 nt   +upstreamnt  +downstreamnt
atggctaacgtcggaaaccagccgccacaacaggccgtaaacaagcctgcgccagggaaa
catggaaatgtactgcctctgtggggcaacgaaaagaccatgaacctcaacccgatgatt
ctcaccaacgtgctgtcctcgccatatttcaaagttcagctttatgaactaaagacgtac
cacgaagttgtggacgaaatctacttcaaggtgactcatgcggagccttgggaaaaggga
agcagaaagactgcaggtcagactggaatgtgcggaggggtgcgtggagtcggaactggt
ggtatcgtgtccactgctttctgtctgctatacaaactgttcactctcaagatgactcgc
aagcaggtcatgggtctgatcactcacacagactcgccatacatccgagcacttggcttc
atgtacataagatacactcagcccccggcagatttggtcgactggtacgatggcttcctg
gatgatgaggaggagctcgacgtgaaggcaggaggcggctgtgtgatgaccgtcggagag
atgctgcgctccttcctcaccaaactcgagtggttctccactctcttcccccgtatccca
gtgcctgtgcagaaaatgattgaccagcagatgaaggcgagacctcgtaagattgccccg
aaggagacaccggaggaagatgccacgttcacaggggaggcagggaggcaaggggaaaaa
cggcactccaggacgccgagacgatccccgagccccagaaggtcgcccaaaagatcacct
aaacgctcacctaaacgctcacccaaacggtctcctaaacgctcacccaaacggtcaagg
agcagtagccaccatcgcgagaaggagcgccatggccccagcttcgaccgagagctggac
agagagcgtgaccggcaaaagaaagagagggagggcaaggataatcatagggataaggat
agggacagacagagacggcggtcccgcagcgcagaccggaaccaagaacgacgagaacgc
agaagaagtcgcagcggcagtcgggaccgaagaagcgaacgcaaggacagagaaagagat
ggtgtagatgacaggagcaagaagaaggaaagggataaccataaagatagaggtactgag
aatgagaagtcgagggataagaagagcaggggagagaacgacgacaggaggcacaaagag
gacagggagagacgcagagaagaaaagagagccaaaaagttgagtcggagtcgaagcagg
gaaaagaagcacaaaagtggcgaggagaagaaccggaaacgagagtgcagccacagcaga
gagaaagacagagatggggaacagcgatcccacaaacgtagtggtagcaaagagaagagt
catcatcagcgcgagtccaataatgaccattgtaaacatggtgaacgcagaaggagtcag
agcactgagtaa

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