Pleuronectes platessa (European plaice): 128454610
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Entry
128454610 CDS
T09923
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128454610 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pplt03041
]
128454610 (prpf38b)
Spliceosome [BR:
pplt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
128454610 (prpf38b)
Complex C
U4/U6.U5 tri-SnRNP related factors
128454610 (prpf38b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
128454610
NCBI-ProteinID:
XP_053294022
EnsemblRapid:
ENSOESG00000024427
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Position
13:complement(13110871..13116236)
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AA seq
483 aa
AA seq
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MANVGNQPPQQAVNKPAPGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHAEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKMTR
KQVMGLITHTDSPYIRALGFMYIRYTQPPADLVDWYDGFLDDEEELDVKAGGGCVMTVGE
MLRSFLTKLEWFSTLFPRIPVPVQKMIDQQMKARPRKIAPKETPEEDATFTGEAGRQGEK
RHSRTPRRSPSPRRSPKRSPKRSPKRSPKRSPKRSPKRSRSSSHHREKERHGPSFDRELD
RERDRQKKEREGKDNHRDKDRDRQRRRSRSADRNQERRERRRSRSGSRDRRSERKDRERD
GVDDRSKKKERDNHKDRGTENEKSRDKKSRGENDDRRHKEDRERRREEKRAKKLSRSRSR
EKKHKSGEEKNRKRECSHSREKDRDGEQRSHKRSGSKEKSHHQRESNNDHCKHGERRRSQ
STE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgtcggaaaccagccgccacaacaggccgtaaacaagcctgcgccagggaaa
catggaaatgtactgcctctgtggggcaacgaaaagaccatgaacctcaacccgatgatt
ctcaccaacgtgctgtcctcgccatatttcaaagttcagctttatgaactaaagacgtac
cacgaagttgtggacgaaatctacttcaaggtgactcatgcggagccttgggaaaaggga
agcagaaagactgcaggtcagactggaatgtgcggaggggtgcgtggagtcggaactggt
ggtatcgtgtccactgctttctgtctgctatacaaactgttcactctcaagatgactcgc
aagcaggtcatgggtctgatcactcacacagactcgccatacatccgagcacttggcttc
atgtacataagatacactcagcccccggcagatttggtcgactggtacgatggcttcctg
gatgatgaggaggagctcgacgtgaaggcaggaggcggctgtgtgatgaccgtcggagag
atgctgcgctccttcctcaccaaactcgagtggttctccactctcttcccccgtatccca
gtgcctgtgcagaaaatgattgaccagcagatgaaggcgagacctcgtaagattgccccg
aaggagacaccggaggaagatgccacgttcacaggggaggcagggaggcaaggggaaaaa
cggcactccaggacgccgagacgatccccgagccccagaaggtcgcccaaaagatcacct
aaacgctcacctaaacgctcacccaaacggtctcctaaacgctcacccaaacggtcaagg
agcagtagccaccatcgcgagaaggagcgccatggccccagcttcgaccgagagctggac
agagagcgtgaccggcaaaagaaagagagggagggcaaggataatcatagggataaggat
agggacagacagagacggcggtcccgcagcgcagaccggaaccaagaacgacgagaacgc
agaagaagtcgcagcggcagtcgggaccgaagaagcgaacgcaaggacagagaaagagat
ggtgtagatgacaggagcaagaagaaggaaagggataaccataaagatagaggtactgag
aatgagaagtcgagggataagaagagcaggggagagaacgacgacaggaggcacaaagag
gacagggagagacgcagagaagaaaagagagccaaaaagttgagtcggagtcgaagcagg
gaaaagaagcacaaaagtggcgaggagaagaaccggaaacgagagtgcagccacagcaga
gagaaagacagagatggggaacagcgatcccacaaacgtagtggtagcaaagagaagagt
catcatcagcgcgagtccaataatgaccattgtaaacatggtgaacgcagaaggagtcag
agcactgagtaa
DBGET
integrated database retrieval system