KEGG   Pleuronectes platessa (European plaice): 128454657
Entry
128454657         CDS       T09923                                 
Name
(RefSeq) RNA-binding protein MEX3B
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
pplt  Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pplt03019]
    128454657
   04121 Ubiquitin system [BR:pplt04121]
    128454657
Enzymes [BR:pplt01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     128454657
Messenger RNA biogenesis [BR:pplt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     128454657
Ubiquitin system [BR:pplt04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    128454657
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 zf-C3HC4 KH_BICC1_1st KH_2 RING_XB3-XBAT31 KH_DEAH11_2nd Prok-RING_4 zf-RING_5
Other DBs
NCBI-GeneID: 128454657
NCBI-ProteinID: XP_053294090
LinkDB
Position
13:13636949..13645417
AA seq 655 aa
MPSPLFHPEILDHDMVISSQHNGVGLTRETDQESRDEDHQEALRFALDQLSLMALEKVDC
GGGLVDSLDGTSGPPSEGCNGVGGGGYMDLQMLEHPGGSRDSPSSCSPSPEYYGSGGYHM
SGSHPMLHGEQSSVLCSRKRSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKT
PVRGEEPVFIVTGRREDVEMAKREIVSAAEHFSMIRASRCKAGAPGGGGGGGGGGGGSLP
GPPHLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMPE
NVDRAREEIETHITLRTGTFVDLQGDNDFHSNGTDVSLEGLAGLNGGLPSALWSRANNHH
SGPPPPPSSPPSTAPMSMHHSSSRKVSSSSTYQAHNGGVNSESFSTARKANEGGSPTSPF
STGSSSTGGGFTFGGDSTPGLPSSDELGFEFSAANIWAPFANGGTGNKTAGSSQQQPLRR
NSSGLSGGAITPRLSPTLPQDAGVGPLDHPLARRAQSDPLSTLSWLQSGSAGGGSFSGAS
SSSSGGSSTGYSSCSASSLPGGSPTDSEGGSSGVGLSSGILSRLKSGSGVAGLVGVGPGV
NRDCFVCFESEVTAALVPCGHNLFCMECAGQICQSSEPECPVCHIPTTQCIRIFS
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgcctagccctttattccaccctgagattttggaccacgacatggtgatcagcagccag
cacaatggggtcggtctgacccgagagacggaccaggagtcccgggacgaggaccaccaa
gaggcgctccgcttcgccctggaccagctgtcactcatggccctggagaaagtggactgt
gggggcggactggtcgactctctggacgggacctcgggtcccccttccgagggctgcaac
ggcgtcggtggagggggctacatggacctacagatgctggagcatcccggtgggtcgcgg
gactcgccctcgtcctgctccccatccccggagtactatggctccggcgggtaccacatg
agcggctcgcaccccatgctccacggggaacaaagctccgtcctctgcagcaggaaaaga
agtgtcaacatgactgaatgtgtgcctgtgcccagctccgagcatgtggctgaaatcgta
ggaagacaaggttgtaagatcaaggccttgcgtgccaaaacaaacacctacattaagact
ccagtgaggggcgaggaacccgtcttcatcgttacagggcgcagagaggatgtggagatg
gccaaacgtgaaattgtctctgcggccgagcatttctctatgatccgggcgtcccgctgc
aaagctggcgcacccggaggaggagggggaggagggggaggaggaggagggtctcttcct
ggaccaccacacctcccaggacagaccaccatacaggtgagggttccctacagagtggtt
ggtttagttgttggaccaaagggagcaactatcaaacgcatccagcagcagactcacacc
tacatcgtgacacccagtcgagagaaggaccccgtgttcgaggtgaccgggatgcctgag
aacgtggaccgagcgagagaggagatcgagacccacatcaccctgcggactggaaccttt
gtcgacctgcagggagacaatgacttccactccaacggcaccgatgtcagcctggaaggc
ctggccggtctgaacggagggctgccatcggctctgtggtccagggctaacaaccaccat
tctggccctcctcctcctccatcctcccctccttccactgctcccatgtccatgcaccac
tcctccagccgaaaggtgtcctcctcatccacctaccaagcgcacaacggcggtgtgaac
tcagaaagcttcagcaccgcccgtaaagccaacgaggggggcagtcccactagtcctttt
agcacaggctccagcagcacaggaggagggttcacgttcgggggtgactccaccccgggg
ctgccctcctcagatgaactgggctttgagtttagtgctgccaacatctgggctcctttt
gccaacggtggaaccggcaataaaacagccggctcctcccagcagcagcctctacgtcgc
aacagcagtgggctcagtggcggcgccatcactccacgattgtctccaactctgcctcag
gacgcaggtgtgggtcctcttgatcaccccctggcccgtcgtgcacaaagtgaccccctc
agcactctctcctggctccagtcaggcagcgcaggaggcggctccttctctggggcatcc
agctccagctccgggggctcgtccacaggttactcctcctgctcggcctcctccctgccc
ggcggctccccaactgactccgagggaggcagcagcggcgtgggcctcagctctgggatc
ctgagtcgactgaaaagcggctctggggtggcgggcctggtcggggtcggccccggggtc
aacagggactgcttcgtgtgttttgagagcgaggtgacggcagccctggtgccttgcggc
cacaacctgttctgcatggagtgtgccgggcaaatctgccagtcaagtgagccggagtgc
cctgtctgccacatccccaccacacagtgcatccgcatcttctcctaa

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