Pleuronectes platessa (European plaice): 128454789
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Entry
128454789 CDS
T09923
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04510
Focal adhesion
pplt04512
ECM-receptor interaction
pplt04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128454789 (lamc1)
04518 Integrin signaling
128454789 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128454789 (lamc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Alanine_zipper
Death
Motif
Other DBs
NCBI-GeneID:
128454789
NCBI-ProteinID:
XP_053294304
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All DBs
Position
13:689928..724022
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AA seq
1594 aa
AA seq
DB search
MQSWIRAVVAWSWVAVCVRGAMDECSDERGGPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGATGVTKSCHICDHQDPRNQHTAADLTDYNNQQDTTWWQSQTMLAGIQYPSSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSESGPWVPYQYYSGSCEKTYQKQGRGFIR
TGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNSGGRPVCNCKHNTEGDD
CNVCKPFYNDRPWRRATADNSNECLPCDCNGKSSECRFDAELYRASGHGGHCRGCADNTD
GPNCERCLDNYHRDQSGSRCLPCGCNSVGSESPQCDNRGMCACKPGVTGDKCDRCQPGHH
SLTEAGCRPCSCSPSGSTQECDVNSGQCRCKDNVEGFSCDRCKLGFFNLDPSNPQGCTPC
FCFQHSSVCDSAEGFSVHALSSSFHRDDEQWTGQQRDGSSVSVQWSPSGQEISLISDDYF
PMYFVAPENFLGNQLLSYGQNLTLRFRVDRRDTRLSAEDLVLEGSDLRVAVPLIAQGNAY
PNENMQTYVFRLHDSADYPWRPTISHSDFQKLLHNLTAVKIRGTYSERSAGYLDDVSLVS
ARRGPGEPARWVEQCTCPQGYQGQHCEQCTLGYRRARPELGAFSSCEPCNCNGHSDACHP
DTGACDCLHHTAGLSCERCKDGFYGEAAQGTAGDCQPCPCPSGATCAVVPKTREVVCTNC
PAGTTGKRCELCDDGFFGDPLGQSGPVRVCRACKCSDNIDPNAVGNCNRETGECLKCIYN
TDGFFCDRCQDGFYGNPLASSPTDKCKACSCSAYGTLGGQTSCSQVTGQCPCLSNVSGRD
CSACEPGFFNLQSSSGCERCNCNPIGSTNGQCDITTGQCECQPGVTGLHCQRCEVASFGF
SSSGCKPCDCDPEGSQSDQCKEDGRCECRPGFVGSRCDMCEENYFYNRTVPGCQQCPSCY
SLVRDKVNQQRQKLHDLQTLIDNLGSGQETVSDKAFEDRLKEAERAIMDLLDEAQTSKGV
DRGLLDRLNTINNTLTTQWNRLQNIRSTVDDTGAQADRARGRVRDAESLIDRARQELDKA
RDAVSKVDIKPPGGTGEPNNMTLLAEEARRLADKHKMDADQIEKIAKDANDTSTKAYNLL
LKTLDGESRTSQEVDELNKKYNEAKELAKNLEKQANKVQAEAEDAGNKALKIFANLTSLP
PFDTKALEDEATKIKKEASDLDKLIDKTEKEYNDLRDDLKPKEQEVRKLLEKGTSEQQTA
DQLLARADAAKALAEEAAKKGQSTYREAEGILNDLRDFDKRVNDNKTAAEDAMKKIPAIN
ATIMAANEKTRQAESALGNAAADAREARTKAEDAERIASTVQKGSAKTKEDAEKAFQDTN
KLDAEVDNMMDDLSAAEQELARKKAEADQDMMMAGMASNNAKEAEDNARKAKGAVKTVLS
TIIALLNQLGNIDKVDLSKLNQIDESLKRAKGKMADSDLDRKLTELNDVARTQEEMITDY
DRQIREIRADITNLNDIKNTLPEGCFNTPSLERP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctggatccgggccgtggtggcctggagctgggtggcggtgtgtgtccgcggc
gccatggacgagtgttcggacgagcggggcggaccgcagcgctgcatgcccgagttcgtg
aacgcggctttcaacgtgacggtggtggcgaccaacacctgcggctccccgcccgaggag
tactgcgtccagaccggggccaccggggtcaccaagtcctgccacatctgcgaccaccag
gacccgcggaaccagcacaccgccgcggacctgaccgactacaacaaccagcaggacacc
acctggtggcagagccagaccatgctggcggggatccagtacccgagctccatcaacctc
accctgcacctcggtaaagccttcgacatcacctacgtgcgcctgaagttccacaccagc
cggccggagagcttcgccatctacaagcggaccagtgagagcggcccctgggtcccgtac
cagtactacagcggctcctgtgagaaaacctaccagaagcaggggcggggcttcatccgg
accggagaggacgagcagcaggcgctctgcaccgacgacttcagtgacatctccccgctc
accggggggaacgtggccttctccacgctggagggccgacccagtgcctacaacttcgac
aacagccccgtcctccaggactgggtgacggccaccgacatcagagtgaccctgaacagg
ctcaacacgttcggagacgaggtcttcaatgaccccaaggtcctcaagtcctactactac
gccatctctgacttcgctgtgggaggaaggtgtaagtgtaacggccacgccagcgagtgt
gtgaagaacagcggaggacggccggtgtgcaactgcaaacacaacacggagggagacgac
tgcaacgtctgcaaaccgttctacaacgaccgtccctggaggagagcgaccgccgacaac
tccaacgagtgtctgccctgtgactgtaacgggaagagcagcgagtgccggttcgatgcc
gagctgtaccgggcctcgggtcacggaggtcactgcagaggctgcgccgacaacaccgac
gggccgaactgtgagcgctgcctggacaactaccaccgggaccagagcggcagccgctgt
ttgccctgcggctgcaactctgtaggctcggagtctccacagtgtgacaacagaggaatg
tgtgcgtgtaaaccaggagtgacgggagataagtgtgaccgctgtcagccgggtcaccac
agcctgacggaggccggctgcaggccctgttcttgctcgccctctggcagcactcaggag
tgtgacgtcaactcaggacagtgtcgctgcaaagacaacgtggagggcttcagctgcgac
aggtgcaaactgggattcttcaacctggatcccagtaaccctcagggctgcacgccgtgc
ttctgcttccagcactcgtctgtgtgcgacagcgccgagggcttcagcgtgcacgccctc
agctcctccttccacagagatgatgaacagtggactggtcagcagcgtgatgggtccagt
gtctctgtccagtggtctcccagtggacaggaaatctccctcatctcagacgactacttc
cccatgtactttgtagccccagagaacttcctggggaaccagctgctcagttatggtcag
aacctgaccctgaggttccgggtggaccggcgggacactcgtctctcggcggaggacctg
gttctggaaggttctgacctgagagtggccgtccccctgatcgcccagggcaacgcctac
cccaacgagaacatgcagacatacgtgttcaggctccatgacagcgccgactacccctgg
aggccgaccatcagccactcggacttccagaaacttcttcacaacttgacggccgtgaag
atccgaggcacctacagtgaacggagtgctggttaccttgatgacgtgtccctggtgtcg
gcccggcggggcccgggggagccggcccgctgggtggagcagtgcacctgtcctcagggc
taccagggtcaacactgtgagcagtgcaccctgggataccgccgcgcccgcccagagctc
ggcgccttcagctcctgtgaaccctgcaactgtaacgggcacagcgacgcctgccacccc
gacacaggagcttgtgactgcctgcaccacacggccggtctgagctgtgaacgctgtaaa
gacgggttctatggggaagccgcccaggggacagccggtgactgccagccgtgtccctgt
ccctccggagccacctgcgccgttgttcccaaaaccagagaggtggtctgcaccaactgt
cccgccggaaccacaggtaaacgctgtgagctctgtgacgacggtttcttcggcgacccg
ctgggccagagcggcccggtccgagtgtgccgggcctgcaagtgcagcgacaacatcgac
cccaacgccgtcggcaactgcaaccgcgagacgggagagtgtctgaagtgcatctacaac
acggacggcttcttctgcgaccgctgccaggacggcttctatggaaacccgctggcctcc
agccccacggacaagtgcaaagcctgctcctgctcagcgtacgggacgctgggtggacag
accagctgctctcaggtcaccggtcagtgtccctgtctctccaacgtctccgggcgggac
tgcagcgcctgtgaacccggcttcttcaacctgcagagctccagcggctgcgagaggtgt
aactgtaacccgattggctccaccaacggtcagtgtgacatcaccacaggccagtgcgag
tgccagcccggcgtcacggggctgcactgccagcgctgcgaggtcgcctccttcggcttc
agctcgtccggctgcaaaccttgtgactgcgaccccgagggctcccagtcagaccagtgc
aaagaggacgggcgctgcgagtgtcgtccgggcttcgttggatctcgatgtgacatgtgt
gaggagaactacttctacaaccgcacggtgccgggctgccagcagtgtccctcctgctac
agtctggtcagagacaaggtgaaccagcagaggcagaagcttcacgacctgcagactctg
atcgataacctgggctcaggtcaggagacggtcagcgacaaggcgtttgaggaccgactg
aaggaggccgagcgagccatcatggacctgctggacgaggctcagaccagcaaaggcgtg
gacagaggtctgctggatcgactgaacaccatcaacaacactctgaccactcagtggaac
cgactgcagaacatccgcagcacggtggacgacaccggcgctcaggccgaccgcgcccgc
ggccgagtccgagacgcagagagcctgatcgaccgagcccggcaggagctggacaaggcc
cgggacgccgtcagcaaagtggacatcaaaccgcccggcggcaccggagagcccaacaac
atgacgctgctcgctgaggaggcgcgaagactcgccgacaagcacaagatggacgctgat
cagatcgagaagatcgccaaagacgccaacgacacgtctacgaaggcgtacaacctgctg
ctgaagactctggacggagagagcaggacgagccaggaagtggacgagctcaacaagaag
tacaacgaggcgaaggagctggcgaagaacctggagaaacaggccaacaaggttcaggcg
gaggccgaggacgccgggaacaaagccctgaagatcttcgccaacctcaccagcctcccg
cccttcgacaccaaggctctggaggacgaagctacaaagatcaagaaggaggcgtcggac
ctggacaagctgatcgataagacggagaaggagtacaacgacctgagagacgacctgaag
cccaaagagcaggaggtccgcaagctgctggagaaagggacgagtgagcagcagaccgca
gatcagctgttagctcgggccgacgccgccaaggctctggctgaggaggcggctaagaag
ggacagtccacttatagagaggcagagggcatcctgaacgacctccgagacttcgacaag
agggtcaacgacaacaagacggctgctgaggacgccatgaagaagatccccgccatcaac
gccaccatcatggcggctaacgagaagaccaggcaggcggagtcggccctcggcaacgcc
gccgccgacgcccgagaggccaggaccaaggccgaggacgccgagaggatcgccagcacc
gtgcagaagggctccgccaagaccaaggaggacgcagagaaggcgttccaggacaccaac
aagctggacgccgaggtggacaacatgatggacgacctgagcgcggctgaacaggagctc
gccaggaagaaggccgaggccgaccaggacatgatgatggcaggaatggcgtccaacaac
gccaaggaggcagaggacaatgcccgaaaggccaagggcgccgtgaagacggtcctgagc
accatcatcgccctgctgaaccagctgggaaacatcgacaaggtcgacctgagcaaactg
aaccaaattgatgagtcgctgaagagggccaagggcaagatggccgacagcgacctggac
aggaagctgacggagctgaacgacgtggcgcggactcaggaggagatgatcactgactac
gaccggcagatccgtgagatccgcgctgacatcaccaacctcaacgacatcaagaacacg
ctacctgagggctgcttcaacacgccatctctggagaggccctaa
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