Pleuronectes platessa (European plaice): 128454794 Help Entry 128454794         CDS       T09923                                  Symbol cop1 Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism pplt  Pleuronectes platessa (European plaice) Pathway pplt04115   p53 signaling pathway pplt04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:pplt00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     128454794 (cop1)  09140 Cellular Processes   09143 Cell growth and death    04115 p53 signaling pathway     128454794 (cop1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:pplt04121]     128454794 (cop1) Enzymes [BR:pplt01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      128454794 (cop1) Ubiquitin system [BR:pplt04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     128454794 (cop1)   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      128454794 (cop1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_RIG_2nd zf-C3HC4_2 EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 zf-RING_2 Beta-prop_EML zf-RING_UBOX Beta-prop_WDR90_POC16_2nd zf-C3HC4_4 zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 WD40_RFWD3 WD40_like Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st zf-rbx1 zf-RING_10 Beta-prop_SPT8 zf_C2H2_10 UvrD-helicase TilS Motif Other DBs NCBI-GeneID:  128454794 NCBI-ProteinID:  XP_053294315 LinkDB All DBs Position 13:complement(20530019..20546406) Genome browser AA seq 709 aa AA seqDB search MSSGRPQQSPGGASSVPSTSSSSTGGSGNTNGGSNAVASNGNNSGNVVPTRTLAVAGEGV LAVPTLAAVPSSRGTFASLSRPTASSGSRKKTLHQAPLYNGLLNSYEDKSNDFVCPICFE MIEEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYVVDNVDQLYPNFLVNELILKQKQRAD EKRLKLDHPNGSRWQVFQDVLSPDQENLDLANVNLMLELLVQKKKQLEAESQAAQRQILR EFLKEARRNKREQLEQLQKELNFLEEDIKRVEEMSGMYSPIMEAECTVPNVEAPSPAPSC SSIIEPPDYIQPPGFGGTTQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNKMSRITDE GRNLNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVT KKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFT GQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVK FSPTSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQL KLWNVNKTHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDT VKSVLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV NT seq 2130 nt NT seq  +upstreamnt  +downstreamnt atgtcaagcggccggccacagcaaagccctggcggtgcgagctccgtgcccagcaccagc agcagtagcaccggaggcagcgggaacacgaacggcggcagcaacgccgtcgcaagtaat ggcaacaactctgggaatgttgtgcccacccggaccctggcagtagccggcgagggcgtc ttggcggtgccaacgttggccgccgtgccttcgtcccggggcacgtttgcatctctgagc agacccactgcgtcctcaggcagcagaaagaaaaccctccaccaagcacctttatacaac ggcctcctgaattcatacgaagataaaagcaacgattttgtctgtcccatttgcttcgaa atgatagaggaggcacacatgacaaagtgtggccacagtttctgtttcaagtgtatccgc cagagcctcgaggatagcaaccgatgtcccaagtgtaactatgttgtggataatgtagat cagctttacccaaactttcttgtaaacgaactgatcctcaaacagaagcaaagggcagat gaaaagagactaaaattggatcatcctaacgggtctaggtggcaggtcttccaggatgtg ttgagtcctgaccaagagaacttggacttggcaaatgtcaacctgatgctggaactgctg gttcagaagaagaagcagctggaggcggaatctcaagcagcacagagacagatccttagg gagttcctcaaagaagccagaagaaacaagagagagcaactggagcagctacagaaagag ctcaactttcttgaagaagacataaagcgtgttgaggaaatgagcggcatgtactctcca ataatggaggcagagtgcacggtgcctaatgttgaggctccctcaccagcacccagctgc agtagtattattgagcctccagattacatccagcctccaggatttggtggaacaacccag ggaaaacgacagacctggtataacagcaccctggcgtctagaagaaagaggctgacggct cactttgaggatctagaacagtgctacttctccaacaaaatgtctcgcatcacagatgaa ggcaggaacctgaaccaactggatgatttcatggagtgtttgtccaagttcacccgttac aactctgtgcggccgctggccaccctatcctatgccagtgacctttataatggctccagt atagtctccagtattgagtttgaccgtgactgtgactactttgccattgctggtgtgacc aagaagatcaaggtatttgagtatggcactgtgatccaggacgcagtggacatccactac cctgtcaacgaaatgacctgcaattccaaaatcagctgtatcagctggagcagttatcac aagaaccttctggccagcagtgactatgaggggactgtcatcctgtgggatggattcacc ggccagaggtccaaagtttatcaggaacatgaaaagaggtgttggagtgttgacttcaat ctgatggaccccaagctcttagcctctggttctgatgatgctaaagtgaagttatggtca accaatcttgataactcggtggctagcatcgaggccaaggccaacgtctgctgcgttaaa ttcagtccaacctccagatatcatctggcctttggctgtgcagatcactgtgtccactac tatgatctacgcaacactaagcaaccaatcatggtgttcaaaggtcacaggaaggctgtg tcctacgccaagtttgtcaatggagaggaaattgtttctgcatcgacagacagtcagctg aagctgtggaacgtcaacaaaacccactgtctgcgctccttcaagggtcacatcaatgag aagaactttgtaggcctcgcttccaatggagactatgttgcctgcggaagtgagaacaac tccctttacctttactacaaaggactatccaagactttgttaacattcaagtttgacacg gtaaagagtgtcctggacaaggataagaaggaagacgacacaaacgagttcgtcagtgcc gtctgttggagggccctgcctgacggagagtcaaatgtgctgattgctgcaaacagtcaa ggaacaatcaaggtactcgagctcgtctga

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