Pleuronectes platessa (European plaice): 128455288
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Entry
128455288 CDS
T09923
Symbol
tnn
Name
(RefSeq) tenascin-N isoform X1
KO
K06252
tenascin
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04510
Focal adhesion
pplt04512
ECM-receptor interaction
pplt04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128455288 (tnn)
04518 Integrin signaling
128455288 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128455288 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pplt00536
]
128455288 (tnn)
Glycosaminoglycan binding proteins [BR:
pplt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128455288 (tnn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Teneurin
EGF_TEN
Fn3_PBP1
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_2
EGF_Tenascin
Fn3_VIN3
Arylsulfotran_N
EGF
DUF7949
hEGF
Motif
Other DBs
NCBI-GeneID:
128455288
NCBI-ProteinID:
XP_053294955
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All DBs
Position
13:complement(11479424..11513482)
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AA seq
1115 aa
AA seq
DB search
MTTRLLWRAVCLWALLSTVSHFSHADNPADPSAAEQGVTFSHVYKIDVPGSSSCKLESQA
ETGLQTETTTDGQNDIIFRHNIRLQTPKCDCAESESFKSLLYRVNGLEEEVTYLKTQCTQ
GCCGSGGAVGVDTSCSGHGTYQHDTCSCLCNPGWEGPDCSVSSCPDECNDNGRCVDGKCV
CHQGYTGEDCSQPTCPGDCNDKGHCVDGKCVCFPHFSGEDCSVAKCPNDCSANGRCVDGQ
CICAEGFYGEDCALVLGPQGLRLVQVTDVSLLVEWESVRGAEYYILTYHPKGDGAMEQVR
IPNTENSYLITGLTPGVTYIVQVYAVIKEIHSDADKIVATTDVSAIDDIQVLGQTEASIQ
VDWKNPPAEVDHFRLTHTDPEGQEEELNVQSSQEARTRHTIVGLYPGTEYLISVQAIKGT
TEGKTSSVSGTTDIDDPANLVTTQVTEDTATVSWDRVQAEIGGYMLSYTSAEGSSPEIPV
GRDSTSYRLVGLRPGVVHTVYIWAFRGDKVSRKSSTEAETELDAPTNVLARDETESSFRV
SWDHTQAEVDGYVLTYSSSEGSSVEIPIGSARNSHMLTGLRPGVLYTVYIWAVKSGKVSR
KISTQAVTELDAPANLLARDETESSFSVSWDAVQAEIDGYVLTYSSSEGSSGEIPVGPGR
TSHSLTGMRPGVIYTVYVWAVKGNKASRKTSTQSETDLDAPANLLAQDETESSFNVSWDP
VQAQIDGYILTYSSSEGSSGEIPVGPDSISYTLTGLRPAVLYTVYVWAFKGGKVSGKIST
KAETDIDAPKDLKASDVSLDSASLTWIPPLADIEGYILTYRDEESSMTVEKQLGASVSSF
AVSSLETGKRYIVTLIAYRGSRRSKVVETIFKTVGLVYPFPMDCIQIMKNGNKKSGIYNI
FINNNRSKPIEVFCDMDTDGGGWLMLQRRTTGQLDFLKRWKQYIAGFGNMTDEFWIGLDK
IYQLTNTPTQYELRFDLGLGSERAYAVYDNFKIAEVKQKFKLTIGEYSGTAGDAMTYHQG
RAWTTIDADNDISLGNCALSHRGAWWYQNCHLANLNGKWGDSRHSLGVNWEPWKGHLTSL
DFTEMKIRPLGAMSSRKRRSLLAREKSRNANLQKK
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgaccactagactcctgtggagggccgtgtgcctgtgggctctactcagcaccgtctca
cacttcagccacgccgacaaccccgcagacccctcagccgcagagcagggagtcaccttc
agccatgtctataaaatcgacgtgccagggagctccagctgtaaactggagagccaggcc
gaaacaggtctgcagacagagacgactacagacggacagaacgatataatcttcagacac
aacatcaggctgcagacgcccaagtgcgactgtgcggagtctgaaagtttcaagtctctg
ttgtacagagtcaacggactggaagaagaagtcacctacctaaagacccagtgtactcag
ggctgctgtggatcaggtggtgctgtaggtgtggacacaagctgcagtggccatggtacc
taccaacacgacacctgcagctgcctctgtaacccgggatgggaaggccccgattgctca
gtgtcctcctgcccagatgagtgtaatgacaatggccgatgtgtggatgggaagtgcgtt
tgccaccagggctacacgggtgaggactgcagccagccgacgtgtccgggcgattgcaac
gacaagggacactgcgtggatgggaaatgtgtgtgtttcccgcacttcagtggcgaagac
tgcagcgtagccaagtgtcccaatgactgcagcgctaatggccggtgtgtggacggccag
tgcatctgtgctgaaggcttttatggagaggactgtgcattagtgttgggacctcagggt
ctgcggttggtgcaggtgacggacgtctctctcctggtcgagtgggagtcagttcgtggg
gcagaatattacattttgacatatcatcccaaaggggatggagccatggagcaggtgcgg
attcccaacacagagaactcctacctcatcacaggcctgactcctggggtcacttacatt
gtccaggtgtacgcagtcatcaaagaaatccacagtgacgcagacaagatcgtggctaca
acagatgtctcggccatcgatgatattcaggttcttggccagacagaagcgtctatccag
gtggactggaagaacccaccagccgaagtggatcacttcaggctcacacacactgacccg
gagggacaggaggaggagctgaatgtacagagcagccaggaggcgcgcaccagacacact
atagttggtctgtatccaggaaccgagtacctgatctcagtgcaggccatcaagggaaca
actgaggggaaaacgtcttctgtctccgggaccacagacatcgatgatccggccaacctc
gtcaccacccaggtaacagaggatactgcaacggtttcctgggatcgagtccaggcagaa
atcgggggctacatgctgagctacacctccgctgagggctccagcccggagatccccgta
ggccgtgacagcacctcgtacaggctggttggcttgaggccgggagttgtccacacagtc
tacatctgggccttcaggggagacaaagtcagcaggaagagttcgactgaggctgaaaca
gagctggatgcccctactaacgtcttggcccgggatgagacagagtccagtttcagggtg
tcctgggatcacactcaggcagaagtcgatggctacgtcctcacctacagctcctctgag
ggctcaagcgtagaaatcccaattggatctgccaggaactctcacatgctgactggtctg
aggcccggcgtcctctacaccgtctacatctgggcggtcaagtcgggcaaagtcagcagg
aagatctcaacacaggctgtgacagaactcgacgctcccgctaacctcttagcccgagat
gagaccgagtccagcttcagcgtgtcctgggatgcggtccaggcagagatcgatggctac
gttctaacctacagctcctctgaaggatctagtggggagatcccagtcgggcctggcaga
acctctcacagtctgactggcatgaggccgggagttatctacactgtgtacgtctgggct
gtcaaggggaacaaagccagcaggaagacctccacccaatcggagacagacctcgacgct
cccgctaacctcttagctcaagacgagactgagtccagcttcaacgtgtcctgggatccg
gtacaggcacaaattgatggctacatcctaacctacagttcctctgagggctctagtgga
gaaatcccagtcgggcctgacagtatctcttacacgctgactggcctgagacctgcagtt
ctctatactgtctacgtctgggctttcaagggaggaaaagtcagtgggaagatctcaacc
aaagctgagacagatatcgatgcccccaaggacctgaaggcctctgatgtgtcactggac
tctgcctctctgacctggattcctcctctggcggacatagagggttacatcctcacctat
agagacgaggaaagcagcatgactgttgaaaagcagctcggagccagcgtgagcagtttt
gccgtgtccagtctggagacggggaagagatacatcgtcaccctcattgcctacagaggc
agcaggaggagtaaggtggtggagacgatcttcaaaacagtcggcctcgtttaccccttc
cccatggactgcattcagatcatgaagaacggaaataagaaaagcggaatctacaacatc
tttattaacaacaaccgctccaaaccaattgaggtcttctgcgacatggacactgacgga
ggcggctggctgatgctgcagcgccgtacaactggccagctggacttcctgaaacgctgg
aagcagtacatcgcaggttttggcaacatgacggatgagttctggatcggcctggataag
atataccagctcaccaacactccgactcagtatgagctgcgattcgacctgggcctgggc
tcagagagggcctacgctgtgtatgacaactttaagatcgctgaagtcaagcagaagttc
aaactcaccataggcgaatacagcgggacagcaggtgacgccatgacctaccaccaaggc
cgagcctggaccactatcgacgcggataatgacatctctctgggaaactgcgccctgtcc
caccgcggcgcctggtggtaccaaaactgtcacctggccaacctgaacggcaaatgggga
gacagcagacacagtttgggggtgaactgggagccgtggaagggccacctgacgtccctc
gacttcaccgagatgaagatccgacctctgggagccatgtccagcaggaagcggcgatcg
ttgttggccagagagaagagcagaaacgcaaacctccaaaagaaatag
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integrated database retrieval system
