Pleuronectes platessa (European plaice): 128455594
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Entry
128455594 CDS
T09923
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128455594 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128455594 (bard1)
04121 Ubiquitin system [BR:
pplt04121
]
128455594 (bard1)
03036 Chromosome and associated proteins [BR:
pplt03036
]
128455594 (bard1)
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128455594 (bard1)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
128455594 (bard1)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
128455594 (bard1)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
128455594 (bard1)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
128455594 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
zf-RING_6
Ank_3
Ank_5
Ank_4
BRCT_2
BRCT
zf-RING_5
zf-RING_10
Ank_KRIT1
PTRF_SDPR
ANK_LRRK2
PTCB-BRCT
zf-C3HC4_3
Tox-REase-3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128455594
NCBI-ProteinID:
XP_053295248
LinkDB
All DBs
Position
14:complement(15588572..15608930)
Genome browser
AA seq
801 aa
AA seq
DB search
MDDHVSVQTEEWRETKEAAANFRRLLLCSKCSNVMKDPVCLGMCEHMVCRSCAGPRAGDG
CVVCHSPAWVKDIQINRQLSSIIQLFCGLDSLLNPADQPDSTVAEIQTQPGSPVLKHKKN
FKIWFSPRSRKVRCTVERPSEVSVPDSRSSGETAAAQPDTSTAQHQDLSVFNFASSSQDS
GSSSQTCDNGKGQRKKRSSKKKSASRKAFLQKATRNQIKQTVKKNRLEAINKQWGITEEV
DTSEEQEQPSAEGPRRSSKKVSFLSPAVMSDQPQSAVSQGSATDLIPGRSTTRESLSGGS
GTEMNRQVSADPSMSDSLIQQNAVSAIDHNPNDDAEEQDNVSPPPKNPSKRTRAVEKVDT
GETTPKRPRASPGRRRKSQDQISPVVLNPSVLTSPRWEKSNKGCREEHERSPRVLAAVGR
KSPGAYASPLGRVSPGSPAIMKRNHKGETLLHLSAIKGDVEAVKELLDQGSDPNLKDNAG
WTPLHEACNLGHMAVVEALISKGALLNTPGYENDSPLHDAVRNGHPAIVKLLLQLGASQN
VLNLHGKRPADYAVSAEMMEIFQEAAEGTQCAKTSFSPSAVSECARRDEPLVFLPSKLPQ
PAQLQLAKLGELLGGKMSDTFSGSVSHVVVPEGHMPTTYSALLGLLAGCWVVRYSWVEAS
LQAGKWMPETEHEAGEGPQRSRLNRCSLLPPLFDGCFFFLLGSFKAPTKDKLAKLLREGG
GQLLSRQPKPDSDVTQTLSAAAYHALPGSDQALCTQYIIFDPQGPHKPAVVRRGKVWSAP
SNWIIDCIAAFQLLPVPETQI
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccatgtttccgtgcagacagaagaatggagggaaactaaagaggcggctgcc
aacttccgccgcctgctgctttgctccaaatgctcgaacgtaatgaaggatccggtgtgt
ctaggaatgtgtgagcacatggtgtgcaggtcctgtgccggcccccgggcaggagatggc
tgtgtggtgtgtcatagccctgcctgggtgaaggacatccagatcaacaggcagctgagc
agcattattcagctcttctgcggtttggactccctactcaatcctgcagaccaaccagac
tccacagttgctgagattcagacacaacctgggagccccgtcttaaaacacaagaagaac
ttcaagatctggttcagcccccgcagccgcaaggtgcgctgcacagtggagaggccttcg
gaggtcagtgtaccggacagcaggtcgtctggagaaaccgctgcagcacagccagacaca
agtactgctcaacaccaggatctgtcagttttcaattttgcttcgtcctcgcaagactcc
ggctcttcttctcaaacatgcgacaatggaaaaggacaacggaagaagaggtcctctaag
aaaaaatctgccagcaggaaggcgttcctgcagaaagccactcgaaatcagattaagcag
acggtgaagaagaataggctggaggccataaataagcaatgggggatcacagaggaggta
gatacctcagaggaacaggagcagccaagtgccgaaggaccaaggaggtccagtaaaaag
gtttccttcctcagccctgctgtcatgtcggaccagcctcagtcggcagtgtcacagggg
agcgcaactgacctcatccctggcaggagcaccacgagggaaagcctctcagggggcagc
ggcactgaaatgaatcgccaggtctcagctgatccgagcatgtcggacagtctcatccag
caaaacgcagtttctgcgattgaccacaatccaaatgatgatgctgaagaacaggacaac
gtttctcctcctccgaagaatccctcaaagagaaccagagcggtggagaaggttgacacc
ggggagaccacgccaaaaaggcccagagcttcccccggccgaaggagaaagtctcaggat
cagatatcaccagtcgtccttaacccttcagttttaacaagccccaggtgggaaaagagc
aacaagggctgcagagaggagcatgaacgcagcccccgtgtcttagccgctgttggtaga
aagtctcccggtgcttatgcttcacctcttggacgggtcagcccaggcagccctgcaatt
atgaagaggaaccacaagggagagacgctgctgcatctatcggctattaagggagatgta
gaagctgtcaaggaactgctggaccaggggtccgaccctaacctgaaggataatgctggg
tggacgcctctgcacgaagcgtgtaacctgggtcacatggcagttgtggaggcgttgatc
tcaaaaggagccctgttgaacacacctggctatgaaaacgattctccgctccacgacgcc
gtgaggaacggacatccggccatcgtcaaactgctgctgcagctcggagcctcacagaac
gtacttaatctgcatggaaaacgtcctgcagattatgccgtgagcgccgagatgatggag
attttccaggaagccgcagaaggaacccagtgtgccaaaacatccttcagcccctcagcg
gtgagtgagtgtgcgaggagggatgaaccgttggtgtttctgcccagcaagcttcctcag
ccagcccagcttcaactggccaaactgggagagctacttggagggaagatgagtgacacc
ttctctggctcagtgagccatgtcgtggtgccagaaggacacatgcccaccacctactcc
gctcttctgggtcttcttgctggctgctgggttgtcagatacagctgggtggaggcgtct
ctgcaggcaggcaagtggatgcccgaaacagagcacgaagcgggagaaggaccccagcgc
agtcgcctgaacagatgtagcctgctccctccgctcttcgatggctgcttcttcttcctc
ctgggctcctttaaggcgccgaccaaagacaagctcgccaagctgctgcgggagggagga
ggtcagctgctgagccggcagcccaagcccgacagcgatgtaacacaaaccctgagcgca
gcggcctaccacgccctgccaggctctgaccaagccctctgcacccagtacatcatcttc
gacccccagggccctcacaagccggcagtggtcagacggggcaaggtctggtcagctccc
tccaactggattatcgactgcatcgcagccttccagctcctccctgtgccggagactcaa
atatga
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