Pleuronectes platessa (European plaice): 128455621
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Entry
128455621 CDS
T09923
Symbol
lmo7a
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128455621 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128455621 (lmo7a)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128455621 (lmo7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
128455621
NCBI-ProteinID:
XP_053295299
LinkDB
All DBs
Position
14:7780315..7828370
Genome browser
AA seq
1546 aa
AA seq
DB search
MEWREQSSVGCDEAFSEAQRWIEAVTKKTFGSSNFRSALENGVLLCDLINKIRPGVVKRV
NRLPTPIAGLDNLNVFLRACGKLGLKEAQLFHPGDLQDLSTRVTVKDQETNRRLKNVLIT
IFWLGRRAQCDRVYDGPHLNFKAFEGLLGTALYKALQESSSQKGSSVRDSGFGDSWYSER
EELYQLREGGRGGGGSGGRHRRDDSLDSLDSLGSRPHSISSDITLKGGSEGCCSDTEADS
VFRMAENKDGLSYRRSVVITPKIATQFNQFLPSKDKTSGYVPAPLRKKRAERNDDNRRSW
ASPVFTDDDGKLTRERQTPESIDGSKSTSDIQDDSAINRQVRYEELQKQREKIKATDDRW
QDDLSKWKNRRRSVNSDIVKKKEEREKVEEITYGSNRRSKTFKEMQEERDNTGKKSFGSR
LGSLAYLDDEEDVFEKPVASPRTRALPARSYTIDTPYNSFEPSEPSLKEVDPPAASRATG
RAASPPRSRGVEVVDRPAGRDTTTTITPSLPPSSRGSLHNSAAGAPLQRSAFSERSRATK
TEEQTTTVVSERSRATKTEEKTTTGVSSSGALQKVAEPRRPLSHAQTEVEAPSPGYLYKQ
QPQPSSMEPKPPGVSHVSASLPRSYQKSDSARLTSVVTARPFGTQASRITSLPRVFAMGD
PHKRVNGDASNKSSVPSRYHEFMTPEEEARSSSAHSSEDEEEEEEEEEVDVTWGKTAPKS
FTSTQSTSSVPAPAVRREAPVRREAPVRREAPVSPAPVSPAPVSPAPAKESSQENYCDMR
INLNQKPNSSRDFGFQAAWDSTGARVTTIAPGSPAEMCQLQPGDEVLTVNSQQVAEMSYT
DWKSCMEEALQDGSLVMDVRRHGKINWDRDQPSLPFKSHKTINLTSTDHPILLGSPDSNT
ANSSLDFTSRMTSETLLPKELTAKPVVDLASNGVNGGFHQKPVTMRNKESDPISLRNLQR
RSEFFEQGGPESAMPDIPVPSITPSSSRWSWDPEEERRRQEKWQKEQERLLQEKYKRDHE
KLQEEWLRAQEEIDNTVDQADFAKPGSLEGNSHSVSPHSPLFSVNQPTSSQREAEERKRK
EEQERQRQEEEKRKREEEERELLRLREERERKERQAEEERKRREEERKRREEQERQAEEE
KKRRDEEEREKRRRDEEERKSREEEVRRREEQREEERRWQESLEQQRRERERAFQQQQQQ
QQQQQQQQRAAGSDGFNMHPPLSYTDRVKSQSSPQLDEEEKPQRRGVYVQPGGMAHWLLE
EQLRSERDKQTRSQRAASELEMERRNILNAMRYREPERVTGGAGLEERKGLQPLTHAELE
RQQILDEMKKKAPLLTDNSWIRQRNAAMAANKESDLPPMRRGDSLDNLDSYNSWRSSWTP
RSNSYVQNYARPDSALSGSSSVYGGGQRPQRPTSFTLPSSYSMGSLRGGAGTPSSPWSRQ
TPSPTPSSQSPTTSPEPMSEAGALQQQSRSVSGKKICTFCDSPLGKGAAMIIESLGLCYH
LTCFKCIDCTANLGGSEAGAEVRIRNKQLYCNSCYMRFKTGLPTVM
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgtgagcagtcctctgtcggctgcgacgaagccttctcagaggcgcagaga
tggattgaggcagtcaccaagaaaacatttgggagcagcaacttccgatcagcactggag
aacggagttctgctgtgtgatctgatcaacaaaatcaggcctggtgtcgtcaagagggtt
aacaggctgcccacgcccatcgctggactggacaacctcaacgtctttctcagggcctgc
ggaaagcttggactaaaggaggcgcagctcttccaccccggagatcttcaggacttatcc
acgagggttacagtcaaggatcaagagaccaaccggaggctgaaaaatgtgttgatcacc
attttctggctcggcagaagagctcagtgcgacagagtctacgatggacctcacctgaac
ttcaaggcgttcgagggattattgggcacagcgctgtacaaggctctgcaggagtcgtcc
agtcagaaaggcagcagcgtcagagacagtggctttggagatagctggtactccgagcga
gaggagctctaccaactgagagaaggaggaagaggaggaggaggcagcggcggcagacac
aggagagacgactccctggacagtttggactccttgggatcccgacctcacagcatctcc
tccgacatcacccttaaaggcggcagcgagggttgttgcagtgacaccgaggccgactcc
gtcttcaggatggctgagaacaaggacggcctcagttaccgccggtcagtcgtcatcacg
cccaagattgccacccagttcaaccagtttctgcccagtaaggacaaaacttcgggttat
gtgcccgctcctctgagaaagaaacgggcagagcgcaacgatgacaacaggcgcagctgg
gccagccccgtattcacggatgatgacggcaaactcaccagagagcgccagacgccagag
agtatcgacgggagcaaatcaacaagtgatatccaggacgactccgccatcaaccggcag
gttcgctacgaagagctgcagaagcagcgcgagaagataaaggctactgacgacaggtgg
caggatgacctgagcaaatggaagaaccggcgcaggagcgtcaactctgacatcgtgaag
aagaaagaggagcgtgagaaggtggaggagattacctacggcagtaacaggaggtccaag
accttcaaggagatgcaagaggagagagacaatacagggaaaaaaagctttggcagtcgt
ctcggatctctggcttacctggacgacgaggaggacgtgtttgagaaacccgtcgcctcc
cctcgtacccgagccctccccgccaggagctacactattgacactccttacaattctttc
gagccctctgagccttctctgaaagaggtcgacccccccgctgcctcccgagccacgggc
agggccgcttcccctcccagatcacggggagtcgaagttgtggaccgtcctgcaggcaga
gacaccacgaccaccatcactcccagcctccctccctccagccggggctctctccacaac
tctgctgcaggtgcacctttacagaggagcgccttctcagaacgcagcagagccaccaag
acagaggagcaaaccacgaccgtcgtctcagaacgcagcagagccaccaagacggaggag
aaaaccacgaccggcgtctcctcctccggagccctacaaaaggtggcagagccaagacgc
ccattgtcgcacgcacaaacggaggtggaggccccctcccctggttatctgtacaaacaa
caaccgcagcccagctcgatggaacccaaacctcccggggtgtctcatgtttccgcctcc
ctccccaggagctaccagaaatcggatagcgcacgtctaacctcagttgtcacggcgagg
cccttcgggacccaggcctcccgcatcacctcacttccacgagtcttcgcaatgggcgac
cctcacaagcgcgtcaatggcgatgcctctaacaagtcgtcggtgccgagccgctatcac
gagttcatgacccccgaggaagaggctcgctccagctcggcccacagcagtgaagatgag
gaggaagaggaggaggaggaggaggtagatgtgacatggggcaagaccgcgccgaagagt
ttcacctcgactcagagcacctcatccgtccctgctcctgcagtcaggagagaagctcca
gtcaggagagaagctccagtcaggagagaagctccagtcagtcctgctccagtcagtcct
gctccagtcagtcctgctccagccaaagaaagcagccaggagaactactgcgacatgcgg
atcaacctgaaccagaagcccaacagcagcagagactttggcttccaggcagcctgggac
tcaaccggagctcgcgtcacgaccatcgcgccaggcagcccggctgagatgtgccagctc
cagcccggagacgaggtgctgacggtgaacagccagcaggtggcagaaatgagctacaca
gactggaagtcctgcatggaggaggcactgcaggacggcagtctggtcatggatgttcgc
cgtcacggcaaaatcaactgggacagagaccaaccttccctgccatttaaaagccataag
accatcaatctgaccagtacggatcatccgatacttctaggttcccctgattcaaacact
gcaaactccagcctggatttcacctcgcgcatgacctcggaaaccctgctgcccaaagag
ctcaccgccaaaccagtagtcgatttggcttcaaatggagttaatggaggtttccaccag
aagccggtgaccatgaggaacaaagagtcagaccccatatctttgagaaacttacaacgg
cgatcagagttttttgaacaaggaggaccagagtctgcgatgccagatatacctgttccc
tcaatcactccctcctccagccgctggtcctgggacccagaggaggagcgcaggagacaa
gagaaatggcagaaggaacaggagcgcctcctacaggagaaatataagcgtgaccatgag
aagctgcaggaggagtggctgagggctcaggaggagatcgacaacaccgtggaccaagca
gattttgcaaagcccggcagcctggaggggaacagccacagcgtcagcccacactcgcca
ctcttttctgtcaaccagcccacttcttctcagcgggaagcggaagagagaaagaggaag
gaggagcaggagcgccaaaggcaggaggaggagaagaggaagcgggaggaggaggagcga
gagctgctgcgtctgcgggaggagagggagcggaaggagaggcaggcggaggaggagagg
aagaggagggaggaggagaggaagaggagggaggaacaggagaggcaggcggaggaggag
aagaagaggagggatgaggaggagagggagaagaggaggagggacgaggaggagaggaag
agtagggaggaggaggtgaggaggagagaggagcagagagaggaggagcggaggtggcag
gaatctttggagcagcagcgcagggagcgggagcgagccttccagcagcagcagcagcag
cagcagcagcagcagcagcagcagcgggctgctggctccgatggctttaacatgcatcct
ccactgtcctatactgacagggtaaaatcccaatcgtctcctcagctcgacgaagaggaa
aaacctcagaggagaggtgtgtacgtgcagccggggggcatggcccactggctgctggag
gagcagttgaggagtgagcgtgacaagcagacccggagtcagagggctgcgtcagagctg
gagatggagcgcagaaacatcctcaacgccatgagatacagagagccggagagagtgaca
ggtggagctggactagaggagaggaagggactgcagcccctgacgcatgctgagctggag
cggcagcagatcctggacgagatgaagaagaaagcaccgctgctcacggacaacagctgg
atccgccagcgcaacgctgccatggccgccaacaaggagagtgacttgccccccatgcgc
aggggcgactctcttgacaacttggactcctacaactcatggcgctcgtcatggactccc
aggagcaactcttacgtccaaaattacgcccggcctgactctgccctctccggcagctct
tccgtttacggtggcggacagaggccccagaggcccacttccttcaccctcccctcctcc
tactccatgggctcccttcgaggcggggcaggaaccccctcgtccccctggtcccggcag
acaccttcccccaccccctcctctcagtcacccacaacctctccggagcctatgtccgag
gccggtgcccttcagcagcagagcaggtcagtgagtggcaagaaaatctgtacgttctgt
gacagccctctgggaaagggagcggccatgatcatcgagtccctcgggctctgttatcat
ttgacctgtttcaagtgtatcgactgtacggcgaacctcggaggatcggaagccggcgct
gaagtcaggatacgaaacaagcagctctactgtaactcctgctacatgcgattcaaaacc
ggcctgccaaccgttatgtga
DBGET
integrated database retrieval system
