Pleuronectes platessa (European plaice): 128455811 Help Entry 128455811         CDS       T09923                                  Symbol col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism pplt  Pleuronectes platessa (European plaice) Pathway pplt04382   Cornified envelope formation pplt04510   Focal adhesion pplt04512   ECM-receptor interaction pplt04518   Integrin signaling pplt04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pplt00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     128455811 (col4a1)    04518 Integrin signaling     128455811 (col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     128455811 (col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     128455811 (col4a1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     128455811 (col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pplt04147]     128455811 (col4a1)    00536 Glycosaminoglycan binding proteins [BR:pplt00536]     128455811 (col4a1) Exosome [BR:pplt04147]  Exosomal proteins   Exosomal proteins of other cancer cells    128455811 (col4a1) Glycosaminoglycan binding proteins [BR:pplt00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128455811 (col4a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  128455811 NCBI-ProteinID:  XP_053295670 LinkDB All DBs Position 14:10019524..10058485 Genome browser AA seq 1640 aa AA seqDB search MLLPSGALFLLAAFCCSVDLTQAEGCGTSCGKCDCSGVKGAKGERGFPGLQGNMGFPGMQ GPEGPPGAMGPAGGLGEPGASGMKGVRGPPGLHGFPGNPGLPGINGNDGPPGSPGIPGCN GTKGGRGLDGTSGFPGLQGPPGIPGFPGMKGDAGGVIGIVPLKGDRGFPGTPGLPGSIGP SGPTGPPGTRGYQGPKGDIGAPGPSGEKGDKLAFVSEKGEKGDQGFRGPPGPPGPPSQEV GGQTTVYVPGHAGDRGPQGDKGEKGICVPHLSGFKGEPGPPGPRGKPGKDGEYGLKGEKG FPGGPGYTGSQGEKGERGPPGFGNGAPGPPGPHGLPGLQGEKGFPGPQGEAGQPGRNIEG PRGERGQKGDVGEKGEKGREGESLVGPPGQPGLSGPPGPPGLPNNSSRCDIPRGAPGPAG PLGLQGEVGQKGDRGDTCVQCEAIGPPGLPGPQGPKGGHGPPGPVGSKGEKGQSGTPGQH GRSGTIGYPGLRGDPGAVGEPGDISLAPGLKGEKGLPGFAGSQGKPGENGHSGIDGLPGV PGLKGEPAKEGLKGERGFDGDPGRIGTPGERGPPGLPGIGQPGEPGEKGSSGRPGIPGAP GALGAKGEPGVGVSSPGLQGVTGPRGETGIPGGQGDRGLTGDAGLPGFPGPKGEQGPYGI GFPGPSGPKGISGVPGDSGSPGEPGRTGQDGFSGQPGSPGQKGEPGRGLPGPKGLQGLPG VSGFPGEKGSIGLHGIPGQEGQTGPPGPQGITGDAGPPGSSGLVGLPGEPGKGSPGAPGT QGQPGVPGPHGGVGVKGDKGYPGPPGLDMPGLQGEKGASGFPGPSGSKGLPGRTGLPGRD GLIGNQGLKGEMGVIGTPGIQGFPGKAGTPGSPGLRGDPGITGPRGGIGQSGPKGERGEP GLQGPPGNMTEVEMEHMKGEKGDLGDFGNPGVTGDKGHRGMPGDPGMPGKDGEAGLPGQP GDKGDPGFPGEPGSMGQPGQKGTVGEMGIPGVSGPKGSKGDFGTTGHPGFRGTDGQKGDR GADGDPGIGLPGPPGEKGLSGHPGFPGSPGEKGQQGHEGMPGKPGLQGSKGDNGSIGYPG QQGRPGEKGTPGLPGSAGEHGREGRPGEGGLQGPPGAPGEKGEHGVDGIPGSSGERGEPG FPGRGFPGPSGEFGGKGDKGGPGFPGTPGHPGVPGIKGDKGLSGSQGPHGETGETGLPGI SLEGPKGVRGEPGQPGEAGSPGAPGPGGLPGRDGPKGDRGNQGSSGYQGETGTKGDPGLT GNPGQPGLPGIDGQKGEMGLHGVPGFPGVKGNFGELGFKGEFGDRGFTGEKGSEGPPGPP GPHTFVKGDIGFPGIQGHPGPQGPSGFPGQKGLQGMTGIAGPKGEDGLPGYNGQNGAKGE IGLSGPQGPRGYPGPPGPDGVPGQVGHPGPSSMEHGFLVTRHSQTVEVPYCPEGTSLIYE GYSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPM PMSMAPITGEGIKPFISRCSVCEAPAMVIAVHSQSIMIPQCPLGWDSLWIGYSFVMHTSA GAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEDNEMFTKPVPTT LKAGSLRTHISRCQVCMKRT NT seq 4923 nt NT seq  +upstreamnt  +downstreamnt atgctgttaccgtccggcgccctgttcctgctggcggctttctgctgcagcgtagacctg acacaggctgagggttgtgggacatcatgtgggaaatgtgactgcagcggcgtgaaagga gcaaagggtgagcggggttttcctggtcttcaaggcaatatgggatttcctgggatgcag ggccctgaggggcctccaggagcaatgggtcccgcgggaggtcttggtgaaccaggggct tctggaatgaaaggagtgaggggtcctcctggtctgcacggtttcccaggaaacccagga ctaccaggcatcaatggaaacgatggcccaccaggttcaccaggtatcccaggatgcaat gggactaaaggaggaagaggactggatggcacctctggttttcctggtcttcaaggacct ccgggcatcccaggatttcctggaatgaagggtgatgctggtggtgtgatcgggattgtt cccctgaaaggagacagaggattccctggcacacctggattacctggatcgatcggacct tctggacccactggacctccaggaactcgtggctaccaaggacccaaaggagatataggc gccccaggcccttctggagagaagggtgacaagctggcttttgtgagtgaaaaaggagaa aagggtgatcaaggatttcggggcccccccggtcccccaggacctccatcacaggaagtg ggaggacaaaccacagtctacgtacctggacatgcgggagatcgaggacctcaaggagat aaaggagagaaaggcatctgtgtccctcatctcagtggttttaaaggtgaacctggacca cctggacccagaggtaaacctggcaaagatggagaatatgggttgaagggagaaaaagga tttccaggaggtcccggatacactggttcccagggtgaaaaaggagaacgaggaccacca ggttttggtaacggtgcccctggccctcctggtccgcatggtcttcctgggttacaagga gaaaaaggcttccctggccctcagggagaagcaggtcaaccaggccgaaacatcgaaggg cctcgaggagagaggggtcagaagggagacgtgggagagaaaggagagaagggtagagaa ggagagtctctggtcggtcctccaggacaaccaggtctctctggcccccctggacccccc ggactcccaaataattcgagtagatgtgacatcccgagaggtgctcctggcccagctgga cctctagggttacaaggggaagttggacaaaaaggtgaccgaggagatacctgtgttcag tgtgaggctatcggcccacctggattacctggtccccaggggcctaagggagggcatgga ccacccggtccagttggaagcaaaggagaaaagggtcagtcaggcactcccggacaacat ggacgatctggtactataggttatcctgggttgcgaggagatcctggtgctgttggtgag cctggcgacatttccttagctcctggtctgaagggagaaaagggtcttcctggttttgct ggttcacaggggaagccaggagaaaacggacactcagggatagacggcctccccggtgta cctggcctcaaaggagaacctgcgaaagagggccttaagggtgagcgaggatttgatggg gaccctggtcgtattggaaccccaggagaaagaggtcctcctggtcttccaggcatcggg caaccaggagagcctggagagaaaggcagttcagggagaccaggaattcctggagctcct ggagcactaggtgcaaaaggggagccaggtgttggtgtgagctctccaggacttcaggga gtaactggaccacgaggagaaactggcatacctggaggtcaaggcgacagaggtttgacg ggagatgcagggttgccaggtttccctgggccgaaaggtgaacaaggaccctatggaatc ggttttccagggccatcaggtccaaaaggaatcagtggagttccaggagattcaggatca ccaggagagccaggaagaacaggacaggatggtttcagtggacaacctggttcacctgga caaaaaggtgaaccagggcggggtcttcctggtccaaaaggtctgcagggccttccggga gtttctggtttcccgggagagaagggtagcattggactacatggtattcctgggcaagaa ggacagacgggacctcctggacctcagggaatcacaggtgacgcgggaccccccggatct tctggactcgttggcttaccaggtgaaccaggaaaaggctcacctggagcgcctggaaca cagggacaacctggagtgcccggaccacacggtggcgtaggtgtaaagggagataaaggc taccctggacctcctggtctggacatgccgggacttcagggagagaagggagcctccgga ttcccaggaccctcgggctccaaaggactgccggggcgaacaggattaccaggcagggac gggctgataggaaaccaaggtcttaagggtgaaatgggggtcattgggacacctggaata caaggatttcccggaaaagctggtacacctggttctcctggtctgagaggtgatcctggt atcactggaccaagaggtggtattggacagtctggacctaaaggagaaaggggagagcca ggtcttcagggacctccggggaacatgaccgaagttgaaatggagcacatgaagggagag aagggagacctcggagactttggtaaccctggtgtcaccggagacaagggccaccgtggc atgcctggagaccctggtatgccaggcaaagatggagaggctggattacctggacaacca ggtgacaaaggagaccctggatttcctggcgagcctggcagtatgggacaacctggacag aagggcactgtaggagagatgggaataccaggtgtgtcgggtcctaaaggttctaaagga gactttggcacgactggacatcctggattcagaggcactgatggacagaaaggagacaga ggagcagacggtgatccaggtattgggctccccggacctccaggagaaaagggtctctca ggtcatccaggatttccaggatcaccaggagaaaagggtcagcagggtcatgagggtatg cccggcaaaccaggactgcaaggctcgaaaggagataatggaagcatcggttacccaggt cagcaaggtagaccaggcgagaagggtacccctgggctccctgggtcagcaggagagcac ggtcgtgaaggccgtcctggtgaaggcggcttgcagggaccccccggtgctcctggagag aagggagagcatggagtggatggcatcccaggatcctcaggggagagaggagagccaggt ttccctggccgaggtttccctgggccatctggagaatttggtggcaaaggtgacaaaggt ggtcctggcttccctggtactccaggtcaccctggagtccctggtatcaaaggtgataag ggactttcaggatcacagggaccacatggtgagacaggagagacgggactcccaggtatc tctctcgagggccccaagggagttaggggagagccaggacaacctggagaagcaggatcc ccaggagcaccgggacctggtggtttgccaggcagagatggaccaaagggagatagagga aatcagggttcctctggttaccagggagagacaggaacgaagggtgaccccggacttact ggaaatcctggacaacctggactcccaggtatcgatggacagaaaggagagatgggacta catggtgtcccagggttcccaggtgtaaaggggaacttcggggaacttggattcaaagga gagtttggagacagaggattcactggagaaaaaggtagtgaaggcccccctggtccccct gggccccacaccttcgtcaaaggagacattggcttcccaggtattcaaggtcacccagga ccacaggggccatctgggttccctggacagaaaggactgcaaggtatgacaggcattgct ggaccgaaaggtgaagacggccttcctggatacaatggtcagaatggagccaaaggagag attggtctgtcagggccacaaggacccaggggatatccgggccccccaggacccgacggt gttccaggtcaagtgggtcatcctggcccctcctccatggagcatgggtttctggtaacc cgtcacagccaaacggtggaggtgccatattgtcctgagggaacatcgctcatatatgag ggctactccttgctctacgtacaaggcaatgagcggtctcatggacaggacttaggtacg gcaggcagctgtttaagaaagttcagccccatgcccttcctgttctgtaacatcaacaat gtgtgcaactttgcctcacgtaacgactactcctactggctcacctcccccgagcccatg cccatgagcatggctcctatcacgggtgaaggcatcaaacccttcatcagcaggtgttct gtgtgtgaggctccagccatggtgatagcagttcacagtcaatccatcatgatcccccag tgccctctgggctgggactctctgtggattggctactcctttgtcatgcacaccagcgcc ggtgctgagggttctggtcaggctctggcctctccaggctcctgtctggaggagttccgc agtgctccgttcatcgagtgtcacggtcgcggaacctgcaactactacgccaactcctac agcttctggctcgccaccatcgaagacaatgagatgtttacgaaacccgtcccgacgacg ctaaaagcaggcagcctcagaacacacatcagccgctgtcaggtgtgcatgaagaggaca taa

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