Pleuronectes platessa (European plaice): 128455872
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Entry
128455872 CDS
T09923
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pplt03036
]
128455872 (smarcal1)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128455872 (smarcal1)
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Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
128455872
NCBI-ProteinID:
XP_053295798
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All DBs
Position
14:16305571..16316103
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AA seq
893 aa
AA seq
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MSHQLTAEQQRKIEENRLRALERRAERMGQAPSINNQPSAGPSRASVQRRAPAAPDNHRD
SSSSAVSAPKLYVPLSKPQPALGFNNQKQAWPTHNQSSANGNQINQSRPSTSSPLRQIQV
IDPLPQSKRPHVSSPVLLNGGGVGRPAQSKSNLSSGSPGGGGAASSFYKQSATKPAQSSM
AQLPSRASTSTSNAVAAKKPSISVRGRCVPHTEDSRFRVEVGYHAELIAVFKSIASKNYD
PATKMWNFSLEDYQQLMEEAASIASVSLRPLEGMEVVDVASCRPSNSAVLGALLKLCSGW
QKPGATLQGQCILVSPNKFEVDVGYNVDVIAAFKQMPTSSYDMKTRKWSFSLEDFKKLMD
LLGGIAAVEVEPLPRAVIQAFSASFDGTEARSLDVPKADLSAIEPSLTNSLMPFQREGVN
FAVFKQGRLLLADDMGLGKTVQAICIAAYYRNEWPLLVVAPSSVRFTWAEAFRRWLPSLS
PDCINVVVKAKDNLRSGLVNIVSYDLLSRMDKQQPGDPFNVLIMDESHFLKNIKTARCKA
ALPLLKAAKRVILLSGTPAMSRPCELYTQILAVRPNLFPRYHDFGMRYCDAKQTNWGWDY
SGSSNLGELKLLLEESLMLRRLKSEVLSQLPAKQRKVVTVTIDGICARMKAALSAAAKEL
SKEHRNKTEEKEALLIFYNRTSEAKLQAIMEYITDMLECGREKFLVFAHHKLVLDHISCE
LGKKNVPFIRIDGATPSLERQQLCDKFQNSAKTCVAVLSITAANMGITLHSADLVIFAEL
FWNPGVLIQAEDRVHRIGQTKSVNIHYLVAKGTADDHLWPMIQGKMNVLQQVGLSESNFS
DNAVSASFHSKDPKQRSIMEMFQRSFTAEDDMDEAMLLEAADDWDNAPPEDTS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatcagctgactgcagagcagcagcgtaagatcgaggagaacaggctgagggcg
ttagagaggcgagccgagaggatgggtcaggctcccagcatcaacaaccagccctcggcg
gggcccagccgtgcttcagtacagagacgggctcctgcagctcctgacaatcacagagac
tcatccagcagcgccgtctctgcaccaaaactgtatgttccactctccaaacctcagcct
gcactgggcttcaacaaccaaaagcaagcttggccgacgcataaccagtcgtctgctaat
ggcaaccagatcaaccagagtaggcccagtacctcttctcctttgagacagatccaagtt
atcgacccacttcctcagtcaaaacgtccacatgtgagcagccctgtcttgttaaatgga
ggaggcgttggcagaccagctcaatccaaatctaacctctcctccggcagccctggtggt
ggcggtgcagccagttctttctacaagcaatcggcaactaaacctgcccagagttctatg
gcacagcttccctcacgcgcctccacctccacctccaatgctgtagctgctaaaaagcct
tccatctcggtgaggggaagatgtgtcccccacacagaggacagtcgcttcagagtagaa
gtgggctaccacgcagagctcattgctgttttcaaatccattgcctccaagaactatgac
cctgctacaaagatgtggaacttcagcctggaggactatcagcagctaatggaggaggca
gcctctattgcctctgtgtctctgaggccactggagggaatggaagtggtggatgtcgct
tcctgtcgacccagtaacagtgcagtgctgggggcgctgctgaagctgtgtagcggctgg
cagaaacctggagccactcttcagggccagtgcatcttggtgtctcccaacaagtttgag
gttgacgtcggctacaatgttgatgtcattgcagcattcaagcaaatgccaacaagcagc
tatgacatgaaaacaagaaagtggagcttctcgcttgaggattttaagaagctcatggat
ctccttggtgggatagcagcagtggaggtggagcctctgcccagggcagtaatccaggct
ttctctgccagttttgatgggactgaagccaggtctttggacgtcccaaaggcagacctg
tccgccatcgaaccctcgctcaccaacagccttatgcccttccagagggagggggtcaat
tttgcagtgtttaaacaaggccgcctcctcctggctgacgacatgggtctgggaaagacc
gtgcaggccatttgcatagcagcctattacaggaatgagtggcccttactggtggtggct
ccctcctccgtacgattcacctgggctgaggccttcaggcgctggctcccctccctcagt
cctgactgcatcaatgtagtggtgaaggccaaagacaacctgcgctccggtttggtcaac
atcgtcagctacgacctgctgagcaggatggacaagcagcagcctggagaccccttcaat
gttcttatcatggatgagtcccatttcctgaagaacatcaagacggctcggtgtaaagct
gctttgcctctactgaaggctgcaaagagagtgattcttctgtctgggaccccggccatg
tcccgaccctgtgagctctacacccagattctggccgtcagacctaatctcttccctcgc
taccatgatttcgggatgcgctactgcgacgccaagcagacgaattggggctgggactac
tccggctcttctaatcttggggagctgaagctgctgttggaggagtctctgatgttgcgc
cgtctcaaatccgaagtcctgtcccagcttcctgctaaacagcgcaaggtcgtcacggtg
accatagatgggatctgcgcccgcatgaaagcggcgctgtcggctgctgccaaggagttg
tccaaggaacatcgcaacaaaacggaagagaaggaagccctcctcatcttttataaccgc
acctctgaagccaagctacaagcgattatggagtacatcacggacatgctggagtgtggg
agggagaagtttctagttttcgcccatcataagttagttctggatcatatctcctgtgaa
ctggggaaaaagaatgtccctttcattcgtattgacggggccacgccttcacttgagcga
cagcagctgtgcgacaagtttcagaactcggccaagacgtgtgtagctgtgctgtccatc
actgcagcgaacatgggaatcaccctgcactccgcggacctggtgatctttgcggagctg
ttctggaaccccggagttctcatccaggcagaggatcgggtgcaccgcattggccaaacc
aagagtgtgaacattcactacctggttgccaagggaactgctgatgatcacctgtggcca
atgatccaggggaaaatgaatgtcttacaacaagtgggtctttctgagtctaacttctca
gacaacgcagtgagtgccagcttccactctaaggacccgaaacagaggagcatcatggag
atgttccagagatcgttcacagccgaggacgacatggacgaggccatgttactggaggcc
gcagacgactgggacaacgccccccccgaggacacctcttga
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