Pleuronectes platessa (European plaice): 128456016
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Entry
128456016 CDS
T09923
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128456016 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128456016 (hspd1)
03110 Chaperones and folding catalysts [BR:
pplt03110
]
128456016 (hspd1)
03029 Mitochondrial biogenesis [BR:
pplt03029
]
128456016 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pplt04147
]
128456016 (hspd1)
Enzymes [BR:
pplt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
128456016 (hspd1)
Messenger RNA biogenesis [BR:
pplt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
128456016 (hspd1)
Chaperones and folding catalysts [BR:
pplt03110
]
Heat shock proteins
HSP60 / Chaperonin
128456016 (hspd1)
Mitochondrial biogenesis [BR:
pplt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
128456016 (hspd1)
Exosome [BR:
pplt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128456016 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
128456016 (hspd1)
Exosomal proteins of breast cancer cells
128456016 (hspd1)
Exosomal proteins of colorectal cancer cells
128456016 (hspd1)
Exosomal proteins of bladder cancer cells
128456016 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
POR
Motif
Other DBs
NCBI-GeneID:
128456016
NCBI-ProteinID:
XP_053296010
LinkDB
All DBs
Position
14:complement(23818936..23825220)
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AA seq
575 aa
AA seq
DB search
MFRLPTVMKQVRPVCRALAPHLTRGYAKEVKFGADARALMLQGVDLLADTVAVTMGPKGR
NVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDCISKGANPVEIRRGVMMAVETVISELKALSRPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINSPKGQKCEFQ
DAYLLLSEKKISTVQSIVPALELANQHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLRDMAVATGGTVFGDESLGLALEDIQAHDFGKVGEVQITKDDTLLLKG
GGSPAEVDKRAAEILEQLESTESDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPCLDGIKTANSDQKIGVDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQSSDEIGYDAMLGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLA
TAEAVVTELPKEEKEMPGGMGGMGGMGGMGGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtctaccaacagtcatgaagcaggtgaggcctgtgtgccgggcgctggcccct
cacctcacacgaggctacgccaaggaggtgaagttcggcgccgacgctcgcgccctcatg
ctgcagggggtcgacctgctggctgacactgtggccgtcaccatgggtccaaagggtcgt
aatgtcatcatcgagcagagctggggcagccccaaggtcaccaaggacggcgtgacggtg
gccaagagcatcgacctgaaggacaagtacaagaacatcggggccaagctggtgcaggat
gtggccaacaacaccaacgaggaggccggtgacggcaccaccaccgccacagtgctggcc
cgcgccatcgccaaggagggcttcgactgcatcagcaaaggagccaaccccgtggagatc
cgccgtggagtcatgatggccgtggaaaccgtcatcagcgagctgaaggcgctctccagg
ccggtgaccacgccagaggagatcgcacaggtcgctacaatctcagccaatggagacgtg
gagatcggtaccatcatctccaatgccatgaagaaagtcggccgcaagggagtcatcact
gtcaaggacgggaagacgctgcacgatgagctggagatcatcgaggggatgaagtttgac
cgcggatacatttccccgtatttcatcaactcccctaaaggtcagaagtgcgagttccag
gacgcctacctgctgctgagcgagaagaagatctccaccgtccagagcatcgttccagct
ctggagctcgccaaccagcaccgcaagccactggttattatagctgaggatgtggatgga
gaggctctcagcaccttggtcctcaacaggctgaaggtcgggcttcaggtggtcgctgtt
aaagctccgggcttcggagacaacaggaagaaccagctgagggatatggccgtcgccact
gggggcaccgtgttcggggatgagtctctgggtctggccctcgaagacatccaggctcac
gacttcggtaaagtcggtgaggtgcagatcaccaaagacgacacgttgctgctgaaggga
ggcggcagccccgcggaggttgataaacgtgcagcagagatcctggagcagctggaaagc
accgagagcgactacgagaaggagaaactgaacgagaggctcgccaagctgtcggacgga
gtcgctgtgctcaagatcggaggaacgagtgatgtggaggtgaacgagaagaaggatcgc
gtgaccgacgctctgaacgccacccgggcggctgtggaggaggggatcgtccccggtgga
ggctgcgctctgctgcgctgcatcccgtgtctggatggcatcaaaaccgccaactctgac
cagaagatcggtgtggacatcatcaggagggcgctgcgtatccccgccatgaccatcgct
aagaacgccggcgtggagggttcactggtggtggagaagatcctccagtcatcagatgag
atcggctacgacgccatgttgggagagtacgtcaacatggtggagaagggcatcatcgac
cccaccaaggtggtgaggacggcgctgatggacgctgcgggcgtggcttctctgctcgcc
accgccgaggccgtcgtcacggagcttcccaaagaggagaaggagatgcctggtggtatg
ggaggcatgggtggaatgggcggcatgggaggaggcatgggtttctaa
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