Pleuronectes platessa (European plaice): 128456055
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Entry
128456055 CDS
T09923
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04145
Phagosome
pplt04148
Efferocytosis
pplt04510
Focal adhesion
pplt04512
ECM-receptor interaction
pplt04810
Regulation of actin cytoskeleton
pplt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128456055 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128456055 (itgb5)
04148 Efferocytosis
128456055 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128456055 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128456055 (itgb5)
04810 Regulation of actin cytoskeleton
128456055 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128456055 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pplt04515
]
128456055 (itgb5)
Membrane trafficking [BR:
pplt04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
128456055 (itgb5)
Cell adhesion molecules [BR:
pplt04515
]
Integrins
Integrin beta subunits
128456055 (itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
PSI_integrin
EGF_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
128456055
NCBI-ProteinID:
XP_053296063
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Position
14:complement(23518143..23550920)
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AA seq
804 aa
AA seq
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MRWSPGTWMWRAALCCALLQTFTHPVRGLNMCMSGSATSCEECLLIHPSCAWCAQEDFGK
GRTLTSRCDFRQNLEKRGCEARSIEFPTSSFSILQNRPLSSKGSGSSQDDVVQIMPQKIS
LSLRPGDQTWFGVEVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAQEMGKLTSNF
RLGFGSFVDKNMSPFSYTAPKYQENPCSGYKLFPNCVPTFGFRHIVSLTDKVDRFNEEVQ
KQMVSRNRDAPEGGFDAILQAAVCKEEIGWRKGAYHLLVFATDDVPHLALDGRLGGLVQP
HDGRCHLNDNNEYSASTKMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKNFTALIPGT
TVEILDQDSKNVIQLIITAYNNIRSKVELSVWDHPRDIGLSFTATCQDGKPLPGLRKCAD
LKIGDTVSFNVSVKTRSCPGRRANRSFTIKPVGFKDRLEVLVDYQCDCGCSRTAQTNSSI
CSSMGTYNCGTCRCEPGYLGARCECQEGDSSSLYLSACREAEGKQVCSGRGECSCNQCLC
YESEFGKIYGAFCECDDFSCARHKGVLCSGHGECHCGECKCHAGFIGDNCNCSTETSVCV
SDDGQMCSGRGHCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRDCIECRLFNSGRLADN
QTCQRLCKDEIITVESFNADDPGAVLCLYKTDNDCVMKFTYSEHASGRSVLTALKEPECG
GGPDAMTVLLAVVGSILLVGVVLLAVWKLAITIHDRREFTRFQNARSRARYEMASNPLYK
QPVTTHFVETDFDMYGKSYNGGVH
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggagcccggggacgtggatgtggcgcgcggctctgtgctgcgcgctcctgcag
acctttacgcacccggtccgaggtctcaacatgtgtatgagtggaagtgctacgtcctgt
gaggagtgtctcctgattcatcccagttgcgcctggtgcgcacaagaggactttgggaag
gggcggactctgacttcacgctgcgatttccgtcagaacttggagaagcggggctgcgag
gctcggtccatcgagttccccaccagcagcttctcaatcctgcagaacaggcccctgagt
tcgaaaggctccgggtccagccaggacgatgtggtgcagattatgcctcagaaaatctcc
ctcagtcttcgtccgggagaccagacgtggtttggcgtggaggtgcggcaggtggaggac
tacccggtggacctctactacctgatggacctctctctgtccatgaaggacgacctggac
accatccggaacctgggcaccaagctggcccaggagatggggaagctcaccagcaacttc
aggctgggcttcggctccttcgtggataaaaacatgtcccccttctcctacaccgcgccc
aagtatcaagagaacccatgcagcggatataaactcttccccaactgtgtccccaccttc
ggcttccgccacatcgtctccctgacggacaaagtggatcgctttaacgaggaggtgcag
aagcagatggtgtctcgcaaccgggacgctccagagggcgggttcgacgccatcctgcag
gcggcggtttgtaaggaggaaataggctggaggaagggggcgtaccacctgctggtgttc
gccacagacgacgtgcctcacctcgccctggacgggaggctcggaggcctcgtccagcct
catgatggccggtgccacctcaacgacaacaacgagtacagcgcctccacaaagatggat
tatccctctctggctcttctgggagagaaactggcagaaaataacatctttctcatcttc
gcagtcacaaagcgactctacgttatttataagaactttactgcgctcatccccggaacc
accgtggaaatcctggaccaggactctaagaacgtcatccagctgatcatcacagcctac
aacaacatccgatctaaagtggagctgtcggtgtgggaccaccccagggacatcggcctc
tccttcaccgccacctgccaggatgggaagccgctgccaggcctcaggaagtgtgccgac
ttgaagataggagacaccgtttcgttcaacgtgagcgtgaagacaaggagctgcccgggc
cgccgcgccaaccggagcttcaccatcaagccggtggggttcaaagaccgtctggaggtg
ctggtggattatcagtgtgactgcggctgcagccggacggcacagaccaacagcagcatc
tgcagctccatgggaacttataactgtgggacgtgtcgctgcgagccgggctacctgggc
gcccgctgcgagtgccaggagggcgactccagcagcttgtacctcagcgcctgccgggag
gccgaggggaagcaggtctgcagcgggcgcggagagtgcagctgcaaccagtgtctgtgc
tacgagtcggagttcggcaagatttacggagccttctgcgagtgtgacgacttctcctgc
gcccggcacaaaggcgtcctctgctctggtcacggggagtgtcactgtggggagtgtaag
tgtcacgccggcttcatcggcgacaactgcaactgctccacggagacgtcggtctgcgtt
tcggacgacgggcagatgtgcagtgggcggggccactgcgtgtgcggccgctgccagtgc
accgagcccggcgccttcggggacacgtgtgagaagtgccccacctgccccgacgcctgt
ggaaccaagagggactgtatcgagtgccggcttttcaactcggggcgacttgcagacaac
cagacctgccagcgcctgtgcaaggatgaaatcatcactgtggagagcttcaacgctgac
gacccgggcgctgtgctttgtctctacaagacagacaacgattgtgtcatgaagttcacg
tactcggagcacgccagcggccgctccgtcctcaccgctcttaaagagccagagtgtggt
ggaggcccggacgccatgacggtgctgctggccgtggtgggcagcatcctgctggtgggg
gtcgtgctgctcgccgtctggaagctggccatcaccattcacgaccggagagagttcaca
cgcttccagaacgcacgctcacgagcccgatacgagatggcctccaaccctctgtacaag
cagcccgtcactacacactttgtagaaacagatttcgacatgtacgggaagtcctacaac
ggaggggtccactga
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