Pleuronectes platessa (European plaice): 128456345
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Entry
128456345 CDS
T09923
Symbol
ddx3xa
Name
(RefSeq) DEAD-box helicase 3 X-linked a isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128456345 (ddx3xa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128456345 (ddx3xa)
03041 Spliceosome [BR:
pplt03041
]
128456345 (ddx3xa)
03036 Chromosome and associated proteins [BR:
pplt03036
]
128456345 (ddx3xa)
Enzymes [BR:
pplt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128456345 (ddx3xa)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128456345 (ddx3xa)
mRNA cycle factors
Common to processing body (P body) and stress granule
128456345 (ddx3xa)
Spliceosome [BR:
pplt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128456345 (ddx3xa)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
128456345 (ddx3xa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
APC_u13
Motif
Other DBs
NCBI-GeneID:
128456345
NCBI-ProteinID:
XP_053296441
LinkDB
All DBs
Position
14:complement(24603783..24616599)
Genome browser
AA seq
821 aa
AA seq
DB search
MSHVVIDNPHGLDQQLAALDLNSADGQGGGTGRRYIPPHLRNREAPKNAGNAYSAGIQCG
YSVAPVNLFSPKQCPQPWQAECQQRQSNNFTSGWDDCKIGYPRLASQELAFYHAYSGGWR
NRCASSVYTGNSVTTDGYDDTASVHSWADRCDSPGWDGGRSNGYVNGFHDNRTNGGFGGR
GPPRIDRGGRGAYRGNRGGGSFNQPLLNAGVGGFENKDSNWQGAPRDAAYNSFGGRTDSR
SKSTFFNERGGGGGSRGRYDRGGFSSGGNNRWEDSSEDWSKPTPPNERLEAELFSTSNTG
INFEKYDDIPVEATGSNSPPHIDSFHDVELGEIIMANINLSRYTRPTPVQKYAIPIIKSK
RDLMACAQTGSGKTAAFLLPVLSQIFTEGPGEALQASKNGQDNGRFSRRKQYPLALVLAP
TRELALQIYDEARKVAYRSRVRPCVVYGGADIGGQIRELERGCHLLVATPGRLVDMMERG
KIGLDYCNYLILDEADRMLDMGFEPQIRRIVEQDTMPPKGIRQTMMFSATFPKEIQILAR
DFLEDYIFLAVGRVGSTSENITQKVVWVEETDKRSFLLDLLNATVIPSDEVETPDKPAKA
ALTLVFVETKKGADALEDFLYHEGYSCTSIHGDRSQRDREEALNQFRSGRCPILVATAVA
ARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNSNITKDLLDILV
EAKQEVPPWLESLAYEHQHKSTGRGRSKRFSGGFGARDYRQTPGGAASFTSSRGGGRNPG
GGRGGFGGGGFGGGGGGGFYGNDSYGGNYSNSGSSVDWWGN
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtcattgataatccacacggtctagatcagcagctcgctgccctagac
ttgaactctgctgacggacaaggcggaggaactggccggcgttacattccacctcacctg
aggaacagagaggctccaaaaaacgcaggaaatgcgtattccgcaggtatacagtgcggt
tattcagtggcaccagtaaatctcttctctcctaagcagtgcccacaaccatggcaggca
gagtgtcagcaaaggcagagcaataactttacgtcaggatgggatgactgtaagattggt
tacccaagactggcctctcaagagcttgccttttaccatgcctacagtgggggctggcga
aacagatgtgcctcctcagtctacactggtaacagtgtgaccaccgatgggtatgatgac
acagccagtgtccacagctgggccgatcgatgtgactcacccgggtgggacggaggacgt
agcaacggatatgtgaatgggttccacgacaatcgcactaatgggggatttggaggtcgc
ggaccccctcgcattgatagaggtgggcgcggtgcctaccgtggtaacaggggtggaggc
tcctttaatcaaccactgctaaatgcaggagttggtggttttgaaaacaaagacagcaac
tggcaaggagctcccagggacgctgcctacaacagctttgggggacgcaccgacagcagg
tccaagtcgaccttcttcaatgagcgtggaggcggcggcggctccaggggaagatatgat
cgcggaggcttctcaagtggaggaaacaaccgctgggaggattccagtgaggattggtca
aagcccactcctcctaatgagcgcctagaagcggagctcttttctacaagcaacactggg
ataaactttgagaaatatgacgatatccctgtggaggccaccgggtccaactccccgcct
cacatcgatagtttccatgatgtggaattgggggagattatcatggcgaacatcaacctg
agtcgctacactcgtcccacccccgttcagaaatatgctatccccatcatcaagtccaaa
agagacctgatggcctgcgcccagactggctctggtaagactgctgccttcctactgccc
gtgctgagtcagatcttcaccgaaggaccaggagaagctctgcaggcctccaagaatgga
caggacaacggaaggttcagccgtcgtaaacagtacccgctggccctggtgctggctccg
accagagagctggccttgcagatctatgacgaggcgaggaaggttgcctatcgctctcgt
gtgcgtccctgtgtagtttatggtggagctgacatcggtggacagatcagggaactggag
agaggctgtcaccttctcgtggctacacctggacgtctggtcgatatgatggagaggggc
aagatcggtctggactactgcaactacctgatcctggacgaggctgaccgcatgttggac
atgggtttcgagccacagatcagacgtattgtggagcaggatacgatgccacctaaaggc
attcgtcagaccatgatgttcagtgccaccttccctaaggagatccagattctggctcgt
gatttcctggaggactacattttcctggcggtgggtcgcgtgggttcaacttcagaaaac
atcacccagaaggtggtttgggtggaagaaacggacaagaggtccttcctcctggatctg
ctcaacgccacagttattcccagtgacgaggtcgagaccccagacaaaccagcaaaagca
gcattgactctggtgttcgtggaaaccaagaagggagccgatgccttggaggactttctg
taccacgaaggttactcctgcaccagcatccacggggatcgatcccagagagacagagaa
gaggctctgaatcagttccgatctggacgctgccccatcttagtggctacagctgtggct
gctcgaggtctggacatctccaatgtgaagcacgtcattaactttgatctgcccagtgac
attgaggagtacgttcaccgtatcggccgtacgggacgtgtgggcaacttgggtctggcc
acgtcgttctttaacgacaaaaacagcaacataaccaaagacttgctggacatcttggtg
gaggccaagcaggaggttcccccctggcttgagagtctcgcctacgagcaccagcacaag
agcaccggccgcggacgctccaagaggttctcgggcggtttcggagctagagattaccgt
cagacgcccggtggcgctgccagcttcaccagcagccgtggaggagggaggaaccccgga
ggaggccgcggcggctttggaggaggtggcttcggcggcggtggcggcggcggattctac
ggcaacgacagctacggaggaaactacagcaactctggcagcagcgtggactggtggggc
aactag
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