Pleuronectes platessa (European plaice): 128456414
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Entry
128456414 CDS
T09923
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128456414 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128456414 (mid1)
Enzymes [BR:
pplt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128456414 (mid1)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128456414 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
PRY
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
128456414
NCBI-ProteinID:
XP_053296545
LinkDB
All DBs
Position
14:11420532..11450395
Genome browser
AA seq
689 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRRERVVPTSKAMTSPSARVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPLLDSHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALGDRYDKLKKSSGRFLCVGSEHSHQET
DQQALDSNLNNLIKRTSELESLMGKLIQTCQHVEVNASRQENKLLEECELLINIIQQRRQ
IIATKIKEGKSVRMRKLAQQIASCKQCIERSSSLITQADHTLKETDHTRFLQSAKSTCER
VSMATASSQILLPEINLNDTFDSFALDFTREKKMLESLDYLTAPDPPAIREELCTASYDT
ITVHWTSDDEFVVVSYELQYAIFTSQSNVVSLCNSADSWMIVPNIKQNHYTVHGLQCGTK
YVFIVKAINQAGSRSSEPGKLKTNSQPFKLDAKSAHKKLRVSHDNLTVERDETLSKKSHS
QDRFSSHSSYGVTGNVYIDSGRHYWEALIGGSTWFAVGIAYKSAPKQEWIGKNSASWVLS
RCNNSWVVRHNCKEMPIEPSPHLRRLGILLDYDSGSLSFHDAISSQHLYAFDIAFAQPVC
PVFNVWNKCLTILTGLPIPDHLEGADFNN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaaactctggagtctgagctgacctgcccaatctgtctggagctcttcgaggacccg
ctgctcttgccctgcgctcacagcctttgtttcaactgcgcccaccgcatcctggtgtcc
cactgcacccccagcgagccaattcagtcaatcagcgccttccagtgccctacgtgtcgc
tatgtcatcaccctcaaccagaggggcctagaaggactcaagcgcaacgtcacgttacag
aacatcatcgaccgctatcagaaagcttctctaagtggacctaactctccgaacgagacc
cggcgcgagcgagtcgtccccaccagcaaagccatgacctctcccagtgcccgggtgcag
tgtcagttctgcgagcaggaccctccacaggacgccgtgaagacctgcgtcacctgtgag
gtgtcgtactgcgacgagtgtctcaaggccacccaccccaacaagaagcccttcacgggc
caccgtctaattgagcccttgctggattcccatctgcgggggcttatgtgtctggagcac
gaggacgagaaggtcaacatgtactgtgtgaccgatgagcagttgatctgtgcattgtgt
aagctggtcggccgacacagagaccaccaagtggccgccctcggcgaccgatacgacaaa
ctcaagaaatcttctggccgctttctctgtgtggggagtgaacattcacaccaggagacg
gaccagcaagccctggattccaacctcaacaatctaatcaagaggaccagtgagttggaa
agtctgatgggcaaacttatccaaacctgccaacacgtggaggtaaacgcatcgcgacag
gagaacaagctgctggaggagtgtgagctgctgattaatatcatacagcagcggagacaa
atcattgccaccaagataaaggaggggaagtctgtgcgaatgaggaagctggcccagcag
atagccagctgcaaacagtgcatcgagaggtcctcctccctcatcactcaggccgaccat
accctgaaggagacggaccacactcgctttctgcagtcggctaagagtacctgcgagaga
gtatcgatggcaacggcatcctctcaaatcctgttaccagaaatcaacctgaatgacacg
tttgatagttttgctttggacttcacgagagagaagaaaatgctggaaagcttggactac
ctcacagctccagacccgccagcgatccgcgaggagctgtgcacagcttcgtacgacacc
atcacggttcactggacatcagacgatgagttcgttgtcgtgtcgtatgaacttcagtac
gccatcttcaccagccaatccaatgtcgtcagtttatgcaactctgctgatagctggatg
atcgtacccaacatcaagcagaatcactacactgtgcacggtctccagtgtggcaccaag
tacgtcttcatagtgaaggccataaaccaggccggaagccgcagcagtgaaccagggaag
ctcaagacaaacagccagccgttcaagttggacgcaaagtccgctcacaagaagctgagg
gtgtcccacgacaacctgacagtggagagggacgagacgttgtccaagaagagccacagt
caggaccgcttctccagccacagcagctacggagtcacaggaaacgtctacatcgacagc
ggccgccattactgggaggcgctgataggaggaagcacatggttcgcagtgggcattgct
tacaagtcggcaccaaagcaggagtggattggcaagaactctgcgtcctgggtgctgtcc
cgctgcaacaactcgtgggtggtgcgtcacaactgcaaggagatgccgatcgagccttcg
ccccacctgcggcgtctgggaatactgttggactatgactctgggtccctgtctttccac
gacgccatcagctcccagcacttgtacgcgttcgacatcgccttcgctcagccagtttgc
cccgtgttcaacgtgtggaacaagtgtttgacaatcctcacgggtctgcccatcccagat
cacctagagggggcggatttcaacaactga
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