Pleuronectes platessa (European plaice): 128456417
Help
Entry
128456417 CDS
T09923
Symbol
ranbp2
Name
(RefSeq) ranBP2-like and GRIP domain-containing protein 3 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03013
Nucleocytoplasmic transport
pplt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128456417 (ranbp2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128456417 (ranbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128456417 (ranbp2)
03110 Chaperones and folding catalysts [BR:
pplt03110
]
128456417 (ranbp2)
04121 Ubiquitin system [BR:
pplt04121
]
128456417 (ranbp2)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128456417 (ranbp2)
Chaperones and folding catalysts [BR:
pplt03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
128456417 (ranbp2)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128456417 (ranbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Zn_ribbon_RanBP
IR1-M
Pro_isomerase
WH1
TPR_14
TPR_16
TPR_2
TPR_1
TPR_19
TPR_8
TPR_CcmH_CycH
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
128456417
NCBI-ProteinID:
XP_053296556
LinkDB
All DBs
Position
14:complement(16514282..16534696)
Genome browser
AA seq
3125 aa
AA seq
DB search
MRRSKAEVDRYVSSAQSSSPSLKEKPIKGFLFAKLYSEAKEYELAKRHVSEYLKVQQRDP
KAHRYLGQLYEREGDIAKAVGCYKRSVDLNPAQGDLVLKVAELLVSKEEFDGKTDFWVDK
AAKMLPGNPAVFNLKERLLSRQGQQGWNRLFDLLQAELAARPGDAHVNVKLVQLFCQDGR
LDEAIKHCLTAEKMGLLSHSLDWYRVVVHTLQEYLAQPSVSSNEKLFRQCQRELLLAHCS
LLRITLSESSVQPCCDALKSFDQAMQTLSSIAGCHADDLCEVFVEMRGHLYLHAATLLVK
LAQDRQQTWRVVIDMAALCYLLAYQVSRPKPKVTKRDRSAPPLLELLANDRQSQAGHMLL
NLSTDLTTLIREVVEVFGNRSGQDALFELLFGPQASAASSFIANDDIRSINTTGPELSQL
AKWDTGSILLHGGDLQHLSWLGLQWTLLAQRPALRDWLAQLFPRLTLETSKLDTNAPESI
CLLDLEVFLYGVVFCSHCQLQETAKISSSMNQQQQQQQLQLYEPRCLPLPLLRLLTTDRQ
REWWDALNSLIHKQASTGMSGKQRMIVQHGLSSLRAGEKHGLQPALAIHWAQCLSQTGDE
VNSYYDQKEYIGRSVHYWKVVLPLLEKIKNRRGIPEPLHPLFMHFPSKDIQISSVKGYEE
EFKIAFAALLEIEGRTEEAIATLESINNMSSFWHLAQIYQRLSEEASNGIEETQDRCITY
LRKFRSYLSKIFNANADDIEKLPVSMEEVVDLLNDVNQQLGESGEAIDEEEEKEEGQRGP
VHSSPAHPIETSATISHIKFSSPSPNKSIVSPSKRLISPKTQPHWVEDQKSLLQMLCQQV
EALKNEVHDLRHNSSGNAGSPHHKMYGESYGAEGDAFTPVQSYHGAPLTVATTVPSAYYN
QSPAYNSQYLLRTAANVTPTKGPVYGMNRMPPQQHMYGYQPPTHTPPSQTATPGIYPPQE
QVFGAPLRFESQATSLLSPYSEEYYGQSVTQQTTNPPLPEPGYFTKPSVVPVQPPKTIEG
KPMDFGKLSFSQQAPAEVPKVPSFGAGAVAQSTPSSSFKFNSNFKSNDGDFTFPASQAKH
SESLLDLLTSDIPTKTDAVREKLPTQEPASQTGIFTFGTKGPTSFSFVDSADSTDTGSVF
GKVDQPFKFGDSDTAKPVFGLPSYTPEAEKPAESDNESTHVEEDEDGPHFEPIVPLPDKV
DVKTGEEEEEEMFCNRAKLYRFDTETKEWKERGIGNVKILKHSAKGKVRLLMRREQVLKI
CANHYINADIVLKPNAGSDKSWVWNAIDYADEEPKPEQLAIRFKTADEASLFKAKFEEAQ
KIVLESPEEQSQVKEKEESIKDSPSLAAQFALKQGEWECNACYVINKPTDVRCVACQTAN
PNSSSKPDIQAAGDAKPSPFSFTFGTDSSKPSSSASTFTGFGAFGASIPSSFTFGTSSLK
PADTITSAFGSGFVAPFGKKPGQWDCDKCSVRNEANLDSCVSCNALKASAKTMATAQTTP
PKVEPSTCTVDSGFGAQFGKKPGQWDCDMCEVRNEASVNKCVACSSPNPAAKSTEGPTVS
SNLPAVSGFGSGFGKKPGQWDCDICEVRNEASVNKCVACSSPNPAAKSTEGPTVSSNLPA
VSGFGSAFGKKDGQWDCDVCLVRNDASNTECVSCHTPNANPSLEAMFARKEDEWDCDICL
VRNNGSANKCVACQTPNPNAKSTSSAAPTASSFSFAFGSKSSSSQPPATGFKLPFGGGST
FQFGHKKDKSSADSFKFETPQSGSSSTSAAGFSFSIPNAGGGFKFGIQDTASTDDPTPPS
GSASSFLKSIAAKHNEKQDASTPSEDQTEQDQNPLFTGKPNTLSFADLAQSSDIQFSKKD
TDFKCFSRAGEQMFSSLQATPTKTAASNELEDDDMYKTEENDDIQFEPVVQMPDKVDLVT
GEEDELVLYSQRVKLFRFDTDTSQWKERGVGILKFLKNTSNGRLRVLMRREQVLKVCANH
WITTTMNLKPLAGSDKAWMWLANDFAEGDAKLEQLAAKFKTTELAEEFKMKFDECQRLLL
DIPLQTPHKLVDTGRTAHLIQKAEEMKSGLKDLKLFLTDEKTKIKDDDKQGDITSSNVSS
LVIKGHSETTGPTLEWDNYDLREDALDDTADTSVYASPITSSPLRKNLFRFGESTSGFNF
SFQPGISPSKSPAKPNQSRASEGTDDEQDVTQDEERDGQHFEPVVPLPDLVDISTGEENE
QVVFSHRAKLYRYDKELGQWKERGIGDLKILQNFTTKQVRLIMRRDQVLKICANHWISAA
MKLEPMKGSEKAWVWSAMDFAEEGEGTIEQLAVRFKLQEAANAFKQVFEDAKAAQVNQEL
MTPVTSVVPTSPDTASAESAKPATAVCGKAAIAVLEETTKERTELFPDIEPCSPSSSGPD
YSSKTVVSPPKFVFGTGSLQKIFGSPRSPSEGEDSASGLKAKDAGHPSPASPAFKVPEKG
PSQAEQGGAGSDEDSEVEIVYVREPTAEQAALSGELLLPITFFCYQNEPGYISDDQTDDE
DFESAVKALNGKLYPDAPEKGASACSDDLILSVPPSEPDCQMVWEKKPTPQEEEKAKSLL
LPPNFFCGLSTTDSDTDYDKTEDFETEVRKAQQELAAQLNTGAEAPSSSAVSPEEETPAP
SSSSSDTAGNTSTPQEPTPEQPVETCSQVPSTTISSTSSSTTISSSTTISSTTVSSTTVS
SSSSCPIDLSTKKGSEPESNTEATAPATSTTTGQDLSSFGSKDVSGFSFADLAQTTEGYA
FGATDANFSWANAGASVFGCAVPKPKKTGDEEGTDDDEEEAGDIHFEPIVSLPEVETKSG
EEDEEILFKERAKLYRWDRDLSQWKERGVGDLKILFHPSKHFYRILMRREQVLRVCANHN
ITEAMELKPMNASANSLIWTATDYSDGDGEVEQLAAKFKTAEIAESFKKTFCECQNRIGQ
SGGDDSSVLSPQMSRIQEHSRDSNPQVFLKVSANDQPLGTITIELFSHIVPKTAENFKVL
CTGAKGFGLRNSVFHRVIPGFMCQGGDFTKGDGTGGKSIYGSKFEDENFDVRHTGPGILS
MANCGRDTNNSQFFITLKKAEHLDFKHVVFGWVRDGMDVVLQMGELGTKGGVPTKKLVIT
DCGQL
NT seq
9378 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggagtaaggctgaagtggaccggtacgtctcctccgcacagagctcctctccc
tcgctcaaagagaagccaataaaggggtttttatttgctaaattgtactctgaggcaaag
gagtatgagctcgctaaaagacatgtgtcggaatatctcaaagtccagcagagggatcct
aaagcacacagataccttggacagctctacgagagagagggagacatcgccaaggccgta
ggatgttacaagcggtcggtggacttgaaccctgcccagggggacctggtgttgaaggtg
gctgagttactggtcagtaaggaggagtttgatggcaaaacagatttctgggtggacaaa
gctgccaagatgctgccaggaaaccctgctgtcttcaacctgaaggagcgcctcctgagt
cgtcagggtcagcagggttggaaccggctgtttgacctcctccaggctgagctggcagcg
aggccgggtgatgcacatgtcaacgtgaagctggttcagctcttctgtcaggatggtcga
ctggatgaagccatcaagcattgccttactgcggagaaaatgggcttgctaagccacagt
ctggactggtatagagtggtggtgcacactctgcaggaatatttggctcagcccagtgtt
tctagtaatgaaaagttgtttcggcagtgccagagggagctgctattggcacactgcagc
ctgctgagaatcacactgtctgagagcagtgtgcagccctgctgtgacgcactcaagagt
tttgatcaagctatgcagacactgagcagcattgcgggctgccacgcagatgatctttgt
gaggtgtttgtggagatgagaggtcacctctaccttcatgctgctacactgctggtgaag
ctggcccaggaccgccagcagacctggagggttgtcattgacatggctgcactgtgctac
ctgctagcataccaggtctccagaccaaagcctaaagtgaccaaaagagaccggtcagcc
ccaccgcttctagagctgctggccaacgatcgacaaagtcaggccggacacatgttgctc
aatctgagcactgatttaaccaccttaatcagagaggtggttgaggtatttggaaaccgc
agtggtcaagatgcgctgttcgaattgctatttggaccccaggcctccgctgcatcttca
tttattgccaatgatgacattcgttccatcaacaccacgggtccagagctctcgcaactg
gccaaatgggacactggctccatccttttacatggtggtgacctgcaacatctgagctgg
ttggggctacagtggactcttctggcccaaagaccagcactgagagattggctagcgcag
ctctttccgaggttaaccctggaaacttccaaactggacacaaatgcacccgagtctatc
tgcctcctggatctggaggtgtttttatatggtgtggtgttctgtagccactgtcaactc
caggaaacagcaaaaatcagcagttcaatgaaccagcagcagcagcagcaacaactgcag
ctctatgagcctcgctgcctcccacttcctctccttcgcctcctgaccactgacagacag
agggagtggtgggacgccctcaacagccttattcataaacaggcatctaccggcatgtct
ggcaagcagcgaatgattgtgcagcatggactgagctctctgagagccggagagaaacat
gggcttcaaccagcactggccatccactgggcacagtgtctcagccaaacgggtgatgaa
gtgaactcgtactatgaccaaaaggagtatattggtcggagtgtgcactactggaaagtc
gtcctcccactgttggaaaagatcaaaaacagacgtggcatacccgaacccctccacccc
ctcttcatgcactttccctccaaagatattcagatttcttctgtgaagggttatgaagag
gaattcaagatagcgttcgcagctcttcttgagattgaaggcaggacggaggaggccatc
gctaccttggaatccatcaataacatgtcatccttctggcatttggctcagatctaccag
cggctctcagaggaggccagcaatgggattgaggagacccaagacagatgcatcacttac
ctgagaaagttcaggtcctacctgtctaagatattcaatgccaatgccgacgacattgag
aagctgcctgtatccatggaggaagttgtcgacctcctgaatgatgtaaaccaacagctg
ggggagagtggagaagctatagatgaagaggaggagaaagaggagggtcagagaggacca
gtgcactctagtcctgctcatcccatagaaaccagtgccacaatatcccacattaagttt
tccagtccttctccaaacaaaagcatagtctctccttccaaaagactgatttctcccaag
acgcaacctcattgggtggaggaccagaaaagtctccttcagatgctgtgtcagcaagtt
gaagccctcaagaatgaagttcatgatctaaggcacaactcttcagggaatgcaggctct
cctcatcataagatgtatggggagagctatggggctgagggcgatgcttttaccccagtc
cagtcgtaccatggtgcccccctaacagttgccactacagtcccctctgcttactacaac
cagtctccagcttataactctcagtatctcctgcgcacagcagcaaatgtaactcccacc
aagggcccagtgtacggtatgaaccgtatgccacctcagcagcatatgtatggttaccag
ccgcccactcacacacctccatcgcaaacagccacaccaggcatttaccctcctcaagag
caagtctttggcgcccctctgcgatttgaatcgcaagccacaagccttctttccccatac
agtgaagaatattatggccagagtgtaacccaacaaaccactaaccctcctctacctgaa
cctggctacttcaccaaaccatctgtagtccccgttcagccaccaaagaccatagagggg
aagcctatggactttgggaagctgtccttcagtcaacaggcgcctgctgaagtccccaaa
gtgcctagttttggagcaggggctgttgcccagtcaaccccttcatcttcgttcaaattc
aactccaactttaaatccaacgatggagatttcaccttccctgcttctcaggctaagcac
agtgaaagtctgcttgatctccttacatctgacattcccactaaaacagatgctgttcgg
gaaaagcttcccactcaggagcctgccagccaaacaggcattttcaccttcggcaccaaa
ggtccgactagcttttcctttgtcgattctgcagacagtaccgacactggaagtgttttt
ggaaaagtggaccagccgtttaaatttggggattctgacaccgccaagccagtgtttggg
ttacccagttacacaccagaggcagaaaaaccagcagagagtgacaatgagagcactcat
gttgaggaggatgaggatggccctcattttgaacccattgtacctcttcctgataaagta
gatgtgaaaacgggtgaggaagaagaggaggagatgttttgcaacagggcaaagctgtat
cgatttgacacagagacaaaagagtggaaggagcgaggtattggcaatgttaaaatccta
aaacacagcgctaaggggaaagtccgcctcttaatgagaagggaacaggtcctgaagatc
tgtgccaatcactacatcaatgctgatatagtactaaaacccaatgcaggctctgacaaa
tcctgggtctggaatgccattgattatgcagatgaagaacctaagccagagcagctggcc
atccgctttaaaacagcagatgaggcatcacttttcaaagccaagtttgaggaagcccag
aaaattgtccttgaatcaccagaagagcagagtcaagtgaaggagaaagaggagagcatc
aaagattctccatcactggcagcccaatttgcacttaaacaaggtgaatgggaatgcaat
gcgtgctatgtaataaataaacccacagacgtgcggtgtgttgcatgtcaaactgctaat
cccaattcttcatcaaaaccagacattcaggctgctggtgacgccaaacccagtccattt
agtttcacatttggcacagattcctcaaaacccagtagttctgcctctacatttactgga
tttggtgcttttggagcatctataccctcttcatttacctttgggaccagttccttaaag
cctgctgacacaataacaagcgcgtttggttctggctttgtagctccgtttggaaagaag
ccggggcagtgggactgcgacaaatgttctgtgagaaatgaggccaatttagacagttgc
gtttcttgtaatgctctaaaagcctcggctaaaacaatggcaacagcacaaaccacacca
cctaaagtggagccctctacatgtactgtggactctgggtttggtgcccagtttgggaag
aagcctggacagtgggattgtgatatgtgcgaagtaagaaatgaagcctctgttaacaaa
tgtgtagcttgtagtagcccaaatcctgctgctaaatcaacagaggggcctacagtatca
tcaaatctgccagcggtgtcaggtttcggatctggttttgggaagaagcctgggcagtgg
gattgtgatatatgcgaagtaagaaatgaagcctctgttaacaaatgtgtagcttgtagt
agcccaaatcctgctgctaaatcaacagaggggcctacagtatcatcaaatctgccagcg
gtgtcaggtttcggatctgcttttggaaagaaggatggacagtgggactgcgatgtctgc
ctggtcagaaatgatgcatcaaatactgaatgtgtttcctgccacaccccaaatgcaaat
ccctctttagaagccatgtttgccaggaaggaagacgaatgggactgcgacatttgttta
gtgagaaacaatggctctgccaataagtgtgtggcttgtcagacaccaaaccccaacgct
aaaagcacaagcagtgctgctcccacagcctccagcttcagctttgcctttggatccaag
agttcatcaagtcagccacctgcaactggattcaaactgccgtttggaggtggcagcact
ttccagttcggccacaaaaaagataaaagctctgcagattctttcaagtttgaaactcca
cagtctggatctagtagcacaagtgctgcaggcttctctttctcaattcctaatgcaggt
ggtggcttcaagtttggcattcaggatactgcctcaacagatgatccaacacctccatct
gggtcagcctccagctttcttaaaagcatagctgccaaacataatgagaaacaagatgcg
tctacaccttcagaggaccaaacggaacaagaccaaaatccattatttactggaaaaccc
aatacattaagttttgctgacctggcacagtcctcagacatccagtttagcaagaaagac
acagattttaaatgtttctctcgggccggtgagcagatgttctcatcgttacaggcaacc
cctactaagacggctgcctctaatgaactggaggatgacgacatgtataaaacggaggaa
aatgacgatattcagtttgaaccagtggttcagatgcctgataaggtggatctggtgaca
ggggaggaggatgaactggttctttactctcaacgcgtcaaactgttcagatttgacacc
gataccagtcagtggaaagagcgtggtgtagggatactcaaattcctgaaaaacacctca
aatggaagactcagggtgctcatgagaagagagcaggttctgaaggtgtgcgccaatcac
tggatcaccaccaccatgaatcttaagcccttggcagggtcagataaagcatggatgtgg
ctggccaatgacttcgctgagggagatgctaaacttgaacagttagctgccaagtttaaa
accacggagctggctgaggagtttaaaatgaaatttgatgagtgtcagaggcttcttttg
gacatccccttgcaaaccccccacaagctggttgacacaggcaggacagcacatctcatt
cagaaagcagaggaaatgaagtctggtttgaaagacctgaaattatttttgacagatgag
aaaacaaagatcaaagatgatgacaaacagggagatataacatccagcaatgtttcaagc
cttgtaatcaagggtcacagtgaaaccactggtcccaccttggagtgggataactacgac
ctacgagaagatgctttagatgatactgctgacacatcagtctatgcctcccccatcact
agtagccccttgagaaagaacctgttccgctttggagaatccactagtgggttcaacttc
agcttccaacctggcatcagcccgtccaagtctcctgctaaacctaaccagagcagagcg
tcagagggtactgacgatgagcaggatgtaacccaggatgaggagagggatggccagcac
tttgagcctgtagtccccttgcctgatctggtggatatttcaacaggagaggaaaatgag
caggtggtcttcagtcacagggccaaactatatcgctatgataaggagctgggtcagtgg
aaggagaggggaatcggggacctcaagatcttgcagaattttaccaccaaacaagtgagg
ttgataatgaggagagaccaggtacttaagatatgtgccaaccactggatatcagcagcc
atgaagctggagcctatgaaaggctctgagaaggcctgggtatggagtgccatggacttt
gctgaagaaggagagggtactattgagcagttggctgtgaggttcaagctgcaggaggct
gcaaacgcattcaaacaggtctttgaagatgccaaggctgctcaagtaaaccaggaactt
atgactccagtgacctctgtagttcccacatctccagacactgcatccgcagaatctgca
aagcctgcaacagctgtatgtgggaaggcagccatcgctgtgctagaggagaccacaaaa
gaacgtacagagcttttccccgacattgagccatgttcacccagttcttcgggtccagac
tactcctcaaagacggtggtgtctcctcctaagtttgtttttggcactggtagccttcag
aagatttttggctccccgagatctccctctgagggtgaggactctgcatccggtttgaaa
gccaaagatgctggacatccttcacctgcatcacctgcattcaaagtcccagagaaaggg
ccctcacaggcagaacaaggtggtgcagggtcagatgaggactctgaagtggagatcgtg
tatgtcagggaacccactgctgaacaggctgctttatccggggagctcctgctgccaatc
accttcttctgctaccagaacgaaccaggatacatcagcgatgatcaaactgatgacgag
gactttgagtccgcagtaaaagccctgaatggaaagctctaccccgatgctcctgagaaa
ggggcttcagcgtgtagtgatgacctcatcttgagtgtgccgccttcagagccagactgc
cagatggtgtgggagaagaagccgacgccgcaggaagaggagaaggccaaaagcctcttg
cttccacccaatttcttctgtggcctgagcaccacagacagtgatacagactacgacaag
actgaggacttcgagacagaagtccgcaaggcacagcaagaactggccgcccagttgaat
acaggagcagaagcccccagcagctctgcagtttccccagaagaggagacaccagctccg
tcatccagcagctcagacactgcaggcaacacgtctacgccacaggagccgaccccggag
cagccagtggagacttgtagtcaagttcccagcaccaccatcagcagcaccagcagcagc
accaccatcagcagcagcaccaccatcagcagcaccaccgtcagcagcaccaccgtcagc
agcagcagcagctgtcccatcgacctgtcaacaaagaagggctcagagccggagtccaac
actgaggcaacagctcctgccacttctactacaactggtcaagacctctccagctttggc
tccaaagatgttagtggcttctcgtttgctgacttggcccaaacgacagagggttatgca
tttggagctacagacgccaacttctcgtgggcaaatgctggagcgtcagtgtttgggtgt
gcagtgcccaaaccaaagaagactggagacgaggagggcactgatgatgatgaggaggag
gctggggacattcattttgaaccaatagtgtctctaccagaggtggagacaaagtctgga
gaggaggacgaggaaattctgtttaaggagcgtgccaagctgtaccgatgggaccgggac
ctcagtcagtggaaagagcgcggagtaggtgacctcaagatcctcttccacccgtccaaa
catttctaccgaatcctgatgcggcgagagcaagtgctgagggtttgtgcaaaccacaac
atcacggaggcgatggagctcaaacctatgaacgcctcagctaactcgctgatatggacc
gctaccgactactcagatggagatggtgaagtcgagcagctggcggccaagttcaaaacc
gctgagatagctgagtcattcaagaagacattctgcgagtgtcagaaccgaattggccag
agcggcggcgatgactcgtctgtcttgtcaccacagatgtctagaattcaagagcactcc
agagacagtaacccgcaggtgttcctcaaagtgtcagccaacgaccaaccactgggcacc
atcaccatagagcttttctcccatattgtgcccaagacggcagagaacttcaaggttctc
tgtaccggggcgaaaggcttcggactgcggaactccgtcttccacagagtcataccgggc
ttcatgtgtcagggtggtgacttcacaaaaggggacggcacaggaggcaagtccatctac
ggcagcaagtttgaggatgagaacttcgacgttcggcatacgggcccaggaatcctgtca
atggccaactgtgggcgcgacaccaacaactcccagttcttcatcacgctgaagaaagcc
gaacacctggacttcaaacacgtggtttttggttgggtgcgggacggcatggacgtggtg
ctgcagatgggggagctgggcacgaagggaggcgtgcccacaaagaagctggtcatcaca
gactgtggacagctgtag
DBGET
integrated database retrieval system
