Pleuronectes platessa (European plaice): 128456711
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Entry
128456711 CDS
T09923
Symbol
srsf1b
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03040
Spliceosome
pplt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128456711 (srsf1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128456711 (srsf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pplt03041
]
128456711 (srsf1b)
Spliceosome [BR:
pplt03041
]
Common components
Common spliceosomal components
SR proteins
128456711 (srsf1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
128456711
NCBI-ProteinID:
XP_053296982
LinkDB
All DBs
Position
15:11910356..11914641
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AA seq
263 aa
AA seq
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MSGVIRGPAGSNDCRIYVGNLPPDIRSKDVEDLFYKYGAIRDIDLKNRRGGPPFAFVQFE
DPRDAEDAVHGRDGYDYDGYRLRVEFPRGGRGGGGGGGGGEGGGRGGGGGGGGGGGGGSG
GMGPPRGRYGPPSRRSEHRVIVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFV
RKEDMVYALRNLDNTKFRSHEGETAYIGVKEDGPRSPSYGRSRSRSRSRSRSKSGSRGYS
PRRNRASPRYSPRRSRSRSRSRT
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgtcatccgtggacccgcggggagcaacgactgccgtatctacgtggggaat
ctcccgccagacatccgctcaaaagacgtcgaagacctgttctacaaatatggggcgatc
cgtgatatcgatctgaagaaccggagaggaggaccaccgttcgccttcgtgcagttcgag
gacccgagggatgctgaggatgctgttcatgggcgtgatggttatgactacgatggatac
cgcctgcgtgttgagtttccaagaggagggaggggaggcggtggtggtgggggcggcgga
gaaggaggaggaaggggaggaggaggtggtggtggtgggggtggtggtggtggtagtgga
ggcatgggacccccgaggggaaggtacggtcccccgtcccgacgctctgagcacagggtt
attgtgtcaggtcttccccccagtggaagctggcaggacctgaaggatcacatgcgagag
gcaggtgacgtatgttatgctgatgtttaccgtgatggcaccggcgtagtggagtttgtg
cggaaagaagacatggtctacgctctccgtaatttggataacaccaagtttcgttctcat
gagggagagacggcctacattggggtgaaggaggacggtcctcgcagtcccagctacggg
cgttcgcgctctcgtagccgcagtcgaagccggagcaagagcggctcacgcggctactcc
ccccgtcgcaacagggcatctccacgttactctccccgtcggtcccgctcccgttctcgc
tctcgcacctag
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