Pleuronectes platessa (European plaice): 128456829
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Entry
128456829 CDS
T09923
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128456829 (zc3h12b)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
128456829 (zc3h12b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
128456829
NCBI-ProteinID:
XP_053297173
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Position
15:complement(15365119..15373092)
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AA seq
845 aa
AA seq
DB search
MTAWSMLEKLKMEKRPCREENIDSSEAQHSTDESEDGSSSESESEERQRQRVQVNNSSCK
KREPLAVAKPHRQLCRSPCLDRPSFSQCSTVQDREDETSTRSGIKAASNREYQTKMEFAL
KLGYSGEQVETVLNKLGAAALINDVLAELVRLGNKVEPEIQPCSSTATLTSRSPGVKEVA
SPEVSVEEESVDIIDNLRPIVVDGSNVAMSHGNKEVFSCRGIQLAVEWFREKGHKDITVF
VPAWRKEQSRPDALITDQEILRKLEKEKVLVFTPSRRVQGRRVVCYDDRFIVKLAYDSDG
IIVSNDNYRDLQNEKPEWKKYIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVV
PEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEGALAKCG
TGPAAAKGDSHTEAKRVAPKRQSDPSIRPVACEPLEALSVIRKSETNSVPSLVSALSVPT
MQPAKSHAAGALNTRSASSPVPGSLQFSHSSLEHMSSVQYPPILVTNSHGASVTYGDQFP
KYDSVSDHGYYSLHSDFSNISMSSMHNVDSFCSMEHEHGVYQRNPSHCPESCLSHSNSDS
FSSYGDLYPSSVDSSLEESMKGQQQSPAQSRMHSFSHGFRHEALTRVQSYGPEEPKQGPR
KQPGSHLALHLQHASVGARSSCPGDYPLTQNILPPLSSQPTRSLGMTRMDSISDSRLYDS
NPMRQRRPPLCREQHASWDPLPCSNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQIWN
SPWDTPSAAEHHDRYVIPDHQYQTYRNLCNIFPAYVVHTVMEKNPHLTDPQQLAAVIVTK
LRSCH
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatggtccatgttggagaaactcaaaatggaaaaacgcccatgcagggaggag
aatattgactcaagcgaggctcagcattccactgacgagtctgaggatggaagcagctcg
gagagtgagtcggaagagcggcagcgtcagagggttcaggtgaacaacagcagctgcaaa
aagcgtgagcctttggctgtcgcaaaaccccatcgacagctatgtcgatctccatgcctc
gaccgacccagtttttcccagtgtagcacggtacaagatcgtgaggatgagaccagcaca
agatctgggattaaggctgccagcaacagggaataccagacgaagatggaatttgctctg
aagttgggatattcaggagagcaggtggagactgtgctcaacaagttgggggctgcagct
ttaattaacgatgttcttgctgagttagtaaggcttggaaacaaagtggagcctgagatt
caaccttgcagcagtacagccacactgacatcacggtccccgggtgttaaagaggtcgct
agtccagaagtgtcagtggaagaggaatctgtggatatcatcgataacctcaggcccatc
gtcgtggatggctcgaatgtggcaatgagccatggcaacaaagaggtattctcttgtcgt
ggtattcaacttgctgttgagtggtttcgggagaaagggcacaaagacatcactgtgttt
gtcccagcctggagaaaggaacagtcaaggcccgacgccctcatcacagatcaagaaata
ttacgcaagctggaaaaagagaaggtcttggtttttactccatctcggagagttcaaggc
agaagggtggtgtgctatgatgatcgcttcatagtgaagctggcttatgattctgatgga
attattgtgtcgaatgacaactacagagacttgcaaaatgagaagccagagtggaagaag
tacatagaagagcgtctcctaatgtactcgtttgtcaacgacaagtttatgccgcctgat
gatccacttggaagacatggcccaagcctcgaaaatttcctccgcaagcgtcctgttgtt
cccgagcacaaaaaacaaccctgcccctatggaaaaaagtgcacatatggacataagtgc
aagtactatcatccagagcgcgtcaaccagccacagcggtcagttgctgacgaactacgg
gcctttgctaaattgtctgcagtgaagacgatgagtgagggggctttagctaaatgtggt
actggtccggcagctgcaaagggggacagccacactgaggcaaaacgtgtggcccctaaa
cgtcagtctgaccccagtatccgtccagtggcctgtgaacctctagaggcactgtccgtc
attaggaagtctgagacgaattcagtgccttcccttgtgtctgccctcagtgtgcccacc
atgcagcctgccaagagccacgcagccggggccttgaacacacgatcagccagcagccca
gtgccgggttccttgcagttctcacacagttctctggagcacatgtctagtgtacagtac
cctcctattttagttactaatagccatggcgcctctgtaacatacggtgatcagttccct
aagtatgactcagttagcgaccatggatattattcactgcacagtgatttctcaaacata
agcatgagcagcatgcacaatgttgacagtttctgtagcatggagcacgagcatggtgta
tatcagagaaatccaagccactgccccgaatcctgcctcagccattcaaacagcgactca
ttctcctcctacggggacctgtacccaagctctgtggacagtagcttagaggagagcatg
aaggggcagcagcagtctcctgcacagagtcgcatgcattcgttctcccatgggtttcgc
catgaggcgctgaccagggtgcagagttacggaccagaggaacctaagcagggcccccgt
aagcagcctggatctcatctagcgctacatctccagcatgcttcagtcggcgccaggtcc
agctgccctggagactatcccctcactcagaatatcctaccacctctgtcctcacagccc
acacggtctctcggtatgactcgtatggatagtatatcagattcaaggctgtacgatagt
aacccaatgagacagcggcgacctccactgtgtcgtgagcagcatgcaagctgggaccct
ctgccttgtagtaatgagtcttatggatatcattcatatccactgagtaacagcctgatg
ccgtgttgcgagcgggtgatggtccgcagcatgccagacaaaatggaacaaatctggaac
tcgccatgggacaccccatctgcagctgaacaccatgatcggtatgtgatcccagaccac
cagtatcaaacatatcggaacctttgtaacatctttcccgcttacgtagttcacacagta
atggagaagaaccctcatttgacagacccacaacaacttgctgctgttatcgttacaaaa
ctgaggtcatgccactga
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