Pleuronectes platessa (European plaice): 128456831
Help
Entry
128456831 CDS
T09923
Symbol
capns1a
Name
(RefSeq) calpain small subunit 1a isoform X1
KO
K08583
calpain, small subunit 1
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pplt01002
]
128456831 (capns1a)
Peptidases and inhibitors [BR:
pplt01002
]
Cysteine peptidases
Family C2: calpain family
128456831 (capns1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_7
EF-hand_1
EF-hand_8
CAPN13-like_C_EFh
Gag_FV_central
Motif
Other DBs
NCBI-GeneID:
128456831
NCBI-ProteinID:
XP_053297176
LinkDB
All DBs
Position
15:complement(21674675..21680470)
Genome browser
AA seq
216 aa
AA seq
DB search
MFFVKTLFKGVVDVVSNIDPAQFVPSDPPPPRRPLAYAEQHENDEEKQFRRVFQQLAGDD
MEVSPNELKDILNKIIGKHGDLKTDGFSIESCRSMVAVMDSDSTGKLGFHEFKHLWNNIK
KWQGVYKSHDRDGSGIISEDELPNAFRAAGFPLNDQLFKMIIRRYSDENGNMDFDNYIGC
LVRLDAMCRSFKTLDKDNNGTIKVNVQEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgtcaaaacactcttcaaaggcgtcgtcgatgttgtgagcaacatcgaccca
gcccagtttgtgccttctgaccctcctcctccacgtagaccacttgcatatgcagagcag
catgagaatgatgaggagaaacagttccgcagagtcttccagcagctcgctggagacgac
atggaagtgagcccaaatgagctcaaggacatcctgaataaaatcattggaaagcatgga
gatctgaagacagatggtttcagcattgagtcttgcaggagcatggtggcagtcatggat
agtgacagcacagggaaactcggctttcatgagttcaaacacctctggaacaacataaag
aaatggcagggagtgtataagtctcacgacagagatggatctggcatcatcagtgaagat
gagctgcccaatgctttccgagctgcaggtttccccctcaatgaccagctgttcaagatg
ataattcgcagatacagcgatgaaaatgggaacatggattttgataactatattggctgc
cttgtgaggctggatgccatgtgccgttccttcaaaaccctggataaagataacaatggg
actatcaaagtcaatgtccaggagtggcttcagttgaccatgtactcttga
DBGET
integrated database retrieval system
