Pleuronectes platessa (European plaice): 128456877
Help
Entry
128456877 CDS
T09923
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128456877 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128456877 (nup98)
03036 Chromosome and associated proteins [BR:
pplt03036
]
128456877 (nup98)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128456877 (nup98)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128456877 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
128456877
NCBI-ProteinID:
XP_053297253
LinkDB
All DBs
Position
15:complement(538205..554779)
Genome browser
AA seq
1831 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGNSSTFGQQNTGFGAAGGFGASTFGTTTNTGGLFGSTQNKPGG
LFGSSTFTQPATSAPSTGFGFGAASGTSTSLFGNTGTGTSTGLFSQQSNAFSANKPTSFG
SFGTSTSSGAGLFGSTNTASNPFGGTSSLFGGGAGFPAAQQPGTTVKFNPPIGNDTMVKA
GVTTSINTKHQCITAMKEYENKSLEELRFEDYTAGRKGPTTQMAAATGSLFSATAAAPSA
TTGLFGATAPNTSFSFGQNKGTFGAAPAGFGAPTSGLFTQPAQQPAASLFKPFGQTTTAP
NTGFSFGNTNTMGQANTSTMGLFGSTAQPQTGGLFGAAQTSTAAGFGAGTGLFGQTNTGF
GNVGTQSLFGNKTAGFGTTTTSAPSFGTGTGLFGNKPALTLGTGTNTSTFGFGANPAAGS
LFGNKPATGGLGTGMGTSFGAAVGPGQTSLFGNNQNKLGTTLGTMGSFGTTAFNSGTSTM
GFGAPQQPVALTDPSAAAAQQAMLQQQLSVLAYSPYGDSPLFRNPLSDPKKKEERLKPTN
PTAQKALTTPTHYKLTPRPATRVRPKSLTSAGSSKSQLFDGLDDDEPSLTNGAFVPRKSI
KKLVLKNLNSSQYSSQPETETDDLASPPEYPQNGHSLMEEEEELGGTGSQADDDPEVTQF
YVNPIAKPIPQGRAQTSLQDTISDLNMHKAARNGLELSSEDVLASLGEESLQEEREDEQQ
EIQQSPHPAGIVLNRVGYYTIPSMKDLADMTDEHGECLVENFTIGRKGYGSIFFPGEVNV
SGLSLDEIVHFRRKEVIVYPDDKNKPLEGEGLNRRAEVTLDGVWPNDKTTCTQIRSPERL
ADMNYEGRLEKASRKQGARFLEYRTETGSWVFEVAHFSKYGLQDSDEDEDVPLKTDPKKL
KTMMSPPPSKLQQQPPPSQHQVAPQAQSTVVDPPSGVAELDSDMADITQSFPTESMLGVE
EDSDLPGETDTTCRKLGGLTSAELDGISASSHIASTLGINPHTLQIMKASLFAEDEEESD
LFQGRAAMKVSTEVSSPRIVLPGAQSRTSVGGLLQARFTSGLLSQLSDSPQPPRSRASST
LGDNPRSLHWAAQGPSFLLPPRTPEPSIRTVGVRRLGGPVPLEESVTLGKGALLMDVGLF
KGRSFRVGWGPGWMLAHCGARLSSPGSKQLDHRDLSSKTDFSFLPKPARNKPLVESPYKV
TLEQLVGLEPQVTKTGEGEDEESQTVLQRPLEICLEHSTISTTDSSPCPLVRPQTGVAAL
HEYAKWITELKDTQGDADPLLGHWAEVWTLCEALWGRLGPADQEPDIETQSDYEQQLERR
RTFSAWLSRGATCRVEEEVALAGKGRHTEAIFSYLTGNRISEACRVAQREGDHRLSLLLS
QALGSQYCRELLALQLADWNRMQTDSYLPEERLRIFTLLAGKPVWQSSDSVVNVCSQLDW
KRCVAVHLWFMLPPTASMADALAKYEAAFQGSCEGGKYACAPLPPYLEVEKMDMEEEEEE
EEESKRPLYDLCFHLLKLYSDRHYSLQQLLDPLTVTWERLDYRLSWHLWGVLQALHYSHL
SASRQGLLHASYAAQLESAGLWHMAVFILLHIPDHAQRERAVRGMLTLHCPLQETDESVR
RERFLTERLLIPEQWIHEAKATRAHRDANRHQEALHLYRAGFWNQCHRLLIQHLASDCII
NDNHDYLLEFLEGLAVPEHSTSIQDWDTAGRVYLDYIRVIKTLQDIQQMEHAGYELERLY
TDVTSLCGRIELLPCRTARDRLAQSEMAKRVSNILRAVLSLQQGDSASDSLGIPLAQLAP
HITRLPMPEDYTLEELRGLTQSYLRQLIISQ
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcattcgggactcccttcggtggaggaacggggggattcggcaactct
tccaccttcggacaacaaaacacaggctttggggcggcaggaggatttggggcttctacg
ttcgggacgaccaccaacactggaggactgtttggttccacacagaataaacctggcggt
ctgtttggatccagtacgttcactcaaccagcgacttccgcgccgagcaccggcttcggc
ttcggtgccgcgagcggaacctccaccagcttgtttggcaacacgggaaccggcaccagc
accggactcttctcccagcagagtaatgccttcagtgccaacaaacccacctcttttgga
agcttcgggaccagcaccagcagcggcgccgggctcttcggatccaccaacaccgcctcc
aacccgttcggtggaacgagctctctgttcggaggaggcgccgggttccccgcggcacag
cagccgggaacaaccgtgaaattcaatcctccaataggaaatgacacgatggtgaaagct
ggtgtgaccacgagcatcaacaccaaacaccagtgcatcacggccatgaaggagtacgag
aacaaatccctggaggagttgaggtttgaggattacacagcgggcaggaaaggaccgacc
actcagatggctgcagcgacaggcagcttgttcagtgcgaccgcggccgcgcccagtgcc
accactgggctgtttggtgccacggcccccaacaccagcttctccttcggacagaacaaa
ggcaccttcggagcagcgcccgccgggttcggtgcgcccacaagcggcctgttcacacag
ccggcacagcaaccagccgccagcctcttcaagccgttcggtcagacgaccaccgcgccg
aacaccggcttctccttcggtaacaccaacaccatgggacaggccaacaccagcaccatg
ggtttgtttgggagcacggcacagcctcagacgggcgggttgttcggcgccgctcagacc
agcacggctgcaggcttcggggcgggcactgggctgtttggacaaaccaacaccgggttt
ggaaacgttggcacacagagtttattcggtaataaaacggccggattcggcaccaccacc
accagcgctccctccttcggcaccggcactggactctttggcaacaagccggctctcacg
ctgggaaccggaaccaacacctctacctttggtttcggagcgaatccggctgcagggagt
ctgtttggaaacaaaccggccactgggggactgggcactggaatgggaaccagctttgga
gcagcagtaggaccaggacagacgtctctgttcggaaacaaccagaacaaactgggaacc
acgctgggaaccatgggatcattcggaacgacagcgttcaacagtggaaccagcacgatg
ggattcggagctccacagcaaccagtcgcgctcactgatcccagcgcagcggcggctcag
caggccatgctgcagcagcagctcagcgttctggcgtattcaccgtacggagactcgccg
ctgttcaggaacccgctgtccgaccccaagaagaaagaggagcgtctgaaaccaaccaat
cccacggcccagaaggctctgaccacacccacccactacaagctgacccctcgacctgcg
accagggtccgccctaaatcgctgacgtcagccggctcctccaagtcgcagctcttcgac
ggccttgatgatgacgagccctcgctcaccaacggagccttcgtgcccagaaagagtata
aagaaacttgtgttgaagaacctgaacagcagtcagtacagcagtcagccggagacggag
acagacgacctcgcttccccccccgagtatccacagaacggacacagcctcatggaggag
gaggaggagctggggggcactggcagccaggcagacgatgacccggaggtcacccagttc
tacgttaaccccatcgccaagcccatcccacagggccgcgcccagaccagcctgcaggac
accatcagtgacctgaacatgcacaaagcggcgaggaacggcctggagctgagcagtgag
gacgtgttggcgtctctgggggaggagtctctgcaggaggagagagaggacgagcaacag
gaaattcaacagtctcctcatccagcaggcatcgtcctcaaccgtgtgggttactacacc
atcccctccatgaaggacctggctgacatgacggacgagcacggagagtgtttggtggaa
aactttaccatcggcaggaaaggttatggctccatcttcttccccggtgaggtgaacgtg
agtgggctgagcctcgacgagatcgtccacttcagacgcaaggaggtcatcgtgtacccg
gatgacaaaaacaagccgctggagggggaggggctcaacagacgagccgaggtcaccctg
gatggcgtttggccaaatgacaaaacgacctgtactcagatcaggagccccgagcgtctg
gccgacatgaactacgagggtcggctggagaaagcctcgcgcaaacagggagcgcgtttc
ctggagtacagaactgagacggggtcctgggtgttcgaggtggcccacttctccaagtac
ggcctccaggattctgacgaggacgaggacgtccctctgaaaaccgaccccaaaaagttg
aagaccatgatgtcacctcctccatccaagctgcagcagcaacctccgccctcccagcac
caggtggcgccacaggctcagtccactgtggtggatcctcccagtggcgtggcggagctg
gacagcgacatggccgacatcacccagagcttcccgacagagagcatgctgggagtggag
gaggacagcgacctgcccggggagacggacacgacatgcaggaagctcggaggtttgacc
tctgctgagctcgatggtatctctgcctccagccacatcgcgtcaacgttgggcatcaac
ccgcacacgctccagatcatgaaggcctccctgttcgctgaggacgaggaggagagcgat
ttgttccagggccgagcagcgatgaaagtttccactgaggtctcgtcccctcgcatcgtt
ctgcccggagctcagagccggacctctgtggggggtcttcttcaggctcgttttacctcc
ggcctcctctctcagctctcagactctcctcagcctcctcggtcccgggcgtcctcgacg
ttgggcgacaacccccgctcattacactgggcagcacagggtccctccttcctactgccc
ccccgaactccagagccgtccatcaggacggttggcgtgcggcgcctgggcggccccgtc
cctctcgaagagtcggtcactttggggaagggagctttgctgatggatgtcgggctgttc
aagggccggtcctttcgtgtgggttggggtcctggctggatgctggcgcactgtggagca
cggctcagctcaccgggctctaaacagctcgaccacagagacctgagctccaagaccgac
ttcagcttcctacccaaacctgccaggaataaaccactcgtggaaagcccctacaaagtg
acgctggagcagctggtcggtctggagcctcaggtgacgaagaccggggagggagaggat
gaagagagccagacagtgctgcagcgccccctggagatctgcctggagcacagcaccatc
agcaccacagactcctccccctgccctctggtgcgaccacagactggagtggcagcgctg
cacgaatacgccaagtggatcacagagctgaaggacacgcagggggacgcagaccctctc
ctgggccactgggccgaggtgtggaccctgtgtgaggctctttggggccggctgggcccc
gccgaccaagagccagacatcgagacgcaaagtgactacgagcagcagttggagagacgg
cggaccttctctgcctggctgtcccgtggcgccacctgcagggtggaggaggaggtggct
ctggccgggaagggtcgccacacggaggccatcttcagctacctgacgggcaaccgcatc
agtgaggcgtgtcgagtcgcacagcgggagggcgaccatcggttgtccctgctgctgtct
caggccctgggctctcagtactgtcgtgagctgctggctcttcagctcgccgactggaac
cgcatgcagaccgacagctacctgccagaggaacgacttcgcatcttcacgcttctggca
gggaaacctgtgtggcagtcgtcggactccgtggtgaacgtctgctcccagttggactgg
aaacgctgcgtggccgtccacctctggttcatgttgcctccgactgcctccatggccgat
gccctcgctaaatatgaagctgccttccagggctcatgtgaggggggtaagtacgcctgt
gcccccctgcctccctacctggaggtggagaagatggacatggaggaggaggaggaggag
gaggaggagtccaaacgacctctgtacgacctctgtttccacctgctcaaactctacagt
gacagacactacagtctgcagcagctgctggatcctctcaccgtcacctgggagcgtctg
gattaccgtctgagctggcacctgtggggcgtcctgcaggcgctgcactacagccacctg
agcgcctcacgccagggactcctccacgccagctacgccgcacagctggagagcgccggc
ctctggcacatggccgtcttcatcctcctgcacatccccgaccacgctcagcgggaacga
gccgtcagagggatgttgaccctccactgccccctgcaggagaccgacgagtctgtccgg
agggagcgcttcctaacggagagactgctgatcccagagcagtggatccacgaggccaag
gccacacgagcacaccgagacgcaaaccgacaccaggaggcgctgcatctgtaccgggcc
ggattctggaaccagtgtcaccggctgctgatccaacacctggcttcagactgcatcatc
aacgacaaccacgactacctgctggagttcctggaggggctggcggtccctgaacacagc
accagcatccaggactgggacactgcggggagggtttacctggactacatcagggtcatc
aagactctgcaggacatccagcagatggaacacgctggttacgagctcgagcggctgtac
accgacgtgacgtcgctctgcggcagaatcgaactcctgccctgccggacggccagagac
cggctcgcccaatcagaaatggcgaagcgtgtgtccaacatcctgcgtgcggtgctgagt
ctgcagcagggcgactcggcgtccgactccctcggcatcccgctcgcccagctggcgcca
cacatcacccgcctgccgatgccggaggactacacgctggaggagctgcgaggcctcacg
cagtcctaccttcggcagctcatcatcagccaatga
DBGET
integrated database retrieval system
