Pleuronectes platessa (European plaice): 128456967
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Entry
128456967 CDS
T09923
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03030
DNA replication
pplt03420
Nucleotide excision repair
pplt03430
Mismatch repair
pplt03440
Homologous recombination
pplt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128456967
03420 Nucleotide excision repair
128456967
03430 Mismatch repair
128456967
03440 Homologous recombination
128456967
03460 Fanconi anemia pathway
128456967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128456967
03032 DNA replication proteins [BR:
pplt03032
]
128456967
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128456967
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128456967
DNA replication proteins [BR:
pplt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
128456967
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
128456967
MMR (mismatch excision repair)
128456967
DSBR (double strand breaks repair)
HR (homologous recombination)
128456967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
Extensin_1
CDC24_OB3
DUF223
RADX
IBR
Motif
Other DBs
NCBI-GeneID:
128456967
NCBI-ProteinID:
XP_053297392
LinkDB
All DBs
Position
15:complement(6005834..6037189)
Genome browser
AA seq
714 aa
AA seq
DB search
MSVELTPGAIGILFNGSEVKNPVLQLLNLRSITSPTGPNRFRLMMSDGHQSSTSFLLVTQ
LNNLAEENILEPNCVCVLKKTLTNTLADGRRVVVVMGLEILQSAEETGGRIGSPTPFGTD
DRSPENSGSSTFVSSSAAAPGSSNESNSTVYSPPRGSGKGFVGTSPMMASPMKASPMKAS
PMKASPMMASPMKASPMTPSPMKFSPMKASPMKASPMKASPMKASPMMASPMKASPMTPS
PMKFSPMKASPMKTSPMMFSPTKAMSSSPGSSTKVMPIETLHPYQSKWTIRARVTNKNSI
RTWNNSRGEGKLFSFEIMDESGEIRVTAFNKEVDKFFSLVEQGKVYYISKAMLKPANKQF
TTVKNEYEMTLQANSSIVLCDDSQGVPTLHCDFVPIAELENRDNDAIVDVIGVCKSVEDV
SRITTKASREVSKRALSLIDTTGKVVTVTLWGEEAEKFDGSEQPVVAIKGARVSDFGGRS
ISALFSSTVMVNPDIPEAFRLRTWYDEDGFALNSQSLTSSWSASSGMKINWKTLSDVKNE
NMGHGEKADYFSCVATLLFTRKDTCLYRACPSADCKKKVIDQQNGMYRCEKCNREFPNFK
YRFLLSANLADFGDNQWVTCFEETAEVLLGHTAETLGELKDTDETAFDEVFQKANFTTHI
FKNRVKLETYNDESRVKVTVIEVQPLDHREYSRRLLRDIRTLSRSAGVFPSTAW
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtagaactcaccccgggggccattggcatcctgttcaatggctcagaggtcaaa
aaccctgttctgcagctgctgaacctgcggagcatcactagtcccactggaccaaacagg
ttccggcttatgatgagtgatggtcaccaatcgtcaacttccttcctgctggtcacacag
ttaaacaatctggctgaagagaacatcctggaaccaaactgtgtgtgtgtgctgaagaag
accctcaccaacactctggcggatggcaggcgtgtcgtggttgtgatgggtctggagatc
ttgcagtcggctgaggaaactggaggaaggattggaagtcccactccattcggcacagat
gatagatctccagagaattcgggctcaagcacgtttgtgtcttcatcggctgcagcacct
ggatcctccaatgagagcaacagcacagtgtattctcctcccagaggcagtggaaaaggt
tttgtggggacatcacccatgatggcctcacccatgaaggcctcacccatgaaggcctca
cccatgaaggcatcacccatgatggcctcacccatgaaggcatcacccatgaccccctca
cccatgaagttttcgcccatgaaggcctcacccatgaaggcatcacccatgaaggcctca
cccatgaaggcatcacccatgatggcctcacccatgaaggcatcacccatgaccccctca
cccatgaagttttcgcccatgaaagcctcacccatgaagacatcacccatgatgttttcg
cccacgaaagctatgagctcttctccaggttcttcaacaaaagtgatgcctattgaaacc
ctccacccctaccaaagcaagtggactatcagagcccgagtcaccaacaagaacagtatc
cgaacctggaataactctagaggagagggcaagctcttctcctttgagataatggatgag
agtggagaaatcagggtcacagcattcaacaaggaggtggacaagtttttctctttagtg
gagcaaggcaaggtgtactacatctccaaggctatgctgaagccggccaacaagcagttc
accacagtgaagaacgagtatgagatgaccctccaggccaattcgtccattgtgttgtgt
gatgacagccagggagtccccacactgcactgtgactttgtgcccatcgccgagctggaa
aacagagacaatgacgccatcgttgatgttatcggtgtgtgtaagagtgtggaggatgta
tcccggatcaccacgaaggccagcagagaagtctccaagagggccctcagcctaatagac
acaacaggcaaagtggtgacagtcactctgtggggagaggaggcagagaagtttgatggc
agcgagcagcctgtggtcgctatcaaaggggctcgcgtgtctgatttcggaggcagatct
atctctgccttgttcagctcaacagtcatggtcaacccagacataccagaggcctttaga
ctgaggacgtggtacgacgaggatggcttcgctctcaacagccaatccctgaccagctcg
tggtcagcaagcagcggaatgaagatcaactggaaaacactgagtgacgtgaagaacgaa
aacatgggacacggagagaaggcagactacttcagctgtgtggcgacgctgctgttcact
cgtaaggacacttgtctgtaccgggcctgtccgtctgcagactgcaagaagaaggttata
gaccaacagaacgggatgtaccgctgcgagaagtgtaacagagagttccccaactttaaa
tacagattcctactctctgccaacttggcagacttcggggataaccagtgggtgacatgc
ttcgaggagacagccgaggtcttattaggtcacactgcagaaacactgggcgagttaaaa
gacacagacgagacggcttttgatgaagtcttccagaaagccaacttcacgacgcacatc
tttaaaaacagagtcaagcttgagacgtacaatgacgagagtcgagtcaaggtaaccgtc
attgaagtccagccgctggaccacagggaatacagcaggagactcctcagagacatccgt
acattgtcccgctcggccggagtcttcccatcgactgcgtggtaa
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integrated database retrieval system
