Pleuronectes platessa (European plaice): 128457012
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Entry
128457012 CDS
T09923
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04080
Neuroactive ligand-receptor interaction
pplt04082
Neuroactive ligand signaling
pplt04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128457012 (gabra6b)
04082 Neuroactive ligand signaling
128457012 (gabra6b)
04519 Cadherin signaling
128457012 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pplt04040
]
128457012 (gabra6b)
Ion channels [BR:
pplt04040
]
Ligand-gated channels
GABA-A
128457012 (gabra6b)
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Integrin_b_cyt
Motif
Other DBs
NCBI-GeneID:
128457012
NCBI-ProteinID:
XP_053297463
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Position
15:7283410..7299893
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AA seq
474 aa
AA seq
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MLFLKVDQGFLVVGCLRGMALILTCFLLSCFSASGVRGSQNGDTSIYLDNITRILDRLLD
GYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEIL
RLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLM
NFPMDGHACPLKFGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSEMLK
SNTGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVL
TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAAA
MKVAAQEAAAAAAAAPPPATGTNGEDSSVDASSVLKKRMNSNPLFDRPAKTFPNPPVNAQ
AFLQQGSAVPDNNMLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMELSR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgctttttttaaaagttgaccagggatttctcgtcgtggggtgtttgcgaggcatggct
ctcattttaacttgcttcctcctgtcatgttttagtgcgagcggtgttcgggggagtcag
aacggtgacaccagcatctatttggataacatcacgcgtatattggaccgattattggat
ggctatgacaacagactgcgacctggatttggaggtccggtcacagaggttaaaaccgac
atctttgtcaccagctttggaccagtgtcagatgtcgagatggaatacaccatggacgtg
ttctttcgtcagacgtggatcgacgagcggttgaagttcgagggccccattgagatcctg
cggctcaacaacctgatggtcagcaagatctggacgccggacacctttttccggaatggc
aagaggtcgatctctcacaacatgaccacccccaacaagctgttccgcatcatgcagaac
ggaaccatcctgtacaccatgagattaactataaatgcagagtgcccgatgcgtctgatg
aacttcccgatggacggccacgcctgcccgctcaagtttgggagttatgcttaccccatc
agtgagatcgtgtacacgtggaagaaaggtcctctctcctccgtcgaggtgccacaggag
tcctccagtctgctgcagtacgacctgattggtcagacggtgtcgagcgagatgcttaag
tccaacacaggtgaatacgtcatcatgacggtccacttccacctgcagaggaagatgggc
ttcttcctgatccagacctacattccctgtatcatgaccgtgatcttggcccaagtctcc
ttctggattaacaaggaatcagttccagctcggactgtgttcggtatcaccaccgtcttg
accatgacgacgctcagtatcagcgcccgccactccctccccaaagtttcctacgccacc
gccatggactggttcatcgccgtttgctttgccttcgtcttctccgccctgattgagttt
gcggccgtcaactacttctccaccctgcaagccaacagggagctgcggaaggcagccgct
atgaaggtggcggctcaggaggcggcggcggctgcagctgcggcgccgcctccggccacg
gggaccaatggagaagattcctcggtggatgcctctagtgtgctgaagaagaggatgaac
tccaatccgctgttcgaccgcccggccaaaacgtttcccaacccaccggtcaatgcccag
gccttcctgcagcagggctcagctgtaccggacaacaacatgctgaccggcaccagcatc
atcgacaaatactcccgcatcctcttccccctttcgttcggcgcgttcaacctggtctac
tggatcgtgtatctcaccaaggacaccatggagttgtccaggtga
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