Pleuronectes platessa (European plaice): 128457227
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Entry
128457227 CDS
T09923
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128457227 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128457227 (exosc8)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128457227 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
128457227
NCBI-ProteinID:
XP_053297808
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Position
15:complement(5341009..5345837)
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AA seq
277 aa
AA seq
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MAAGFKTAEPLEYHRSFLKENCRPDGRELSEFRTTTLNIGSISTADGSALVKLGNTTVIC
GIKAELANPPVEAPGKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSEVIQ
TEDLCIERGKLCWVLYCDLMCLDYDGNLLDACIVALLAALKNTQLPDVTISTETSAPEVN
LEKRRGLHIHKHPVATSFCIFDDSVLIVDPTAEEESLATAQLAVVTDEEGRLCSLHKPGG
TSLSGEKLQECISRATVRQREIQKLINKVLHSVKTDQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggtttcaagactgctgagcctctggagtaccacaggagcttcctgaaagaa
aactgcagacctgatggacgagagttgtcagaattcagaaccacgacactgaacataggg
tccatatccacggcagacggctccgccctggtgaagttgggaaacacgacagtgatctgt
gggattaaagcggagttggcgaatcctccagtggaggcgcctggtaaaggctacattgtg
cccaacgtggacctgccgcctctgtgctcgtcccgcttccgaccgggtccaccaggagaa
caggcccaggccgccagccagttcatcgcagatgtgatcgaaagctctgaggtgatccaa
acagaggacttgtgcattgaaagaggaaagctctgctgggtgctctactgtgacttgatg
tgtctcgactacgatgggaacctgttggacgcttgtatcgttgccctgctggctgctctg
aagaacacgcaactcccagatgtgactatcagcacagagaccagtgcaccagaggtcaat
ctagagaagagacgtgggctgcacatccacaaacatccagtcgccacctctttctgtatc
tttgatgactccgtactgatcgtggaccccacggccgaggaggagagtctggcgacggct
cagctcgctgtggtgacggatgaagaaggtcgactctgctctttacacaaaccaggtggg
acgtccctgtcaggagagaagctgcaggagtgcatcagccgagcaacagtgcgacagaga
gagatccagaaactcatcaacaaagtcctacacagtgtgaagacagatcaataa
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