Pleuronectes platessa (European plaice): 128457274
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Entry
128457274 CDS
T09923
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pplt03009
]
128457274 (ddx52)
Enzymes [BR:
pplt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128457274 (ddx52)
Ribosome biogenesis [BR:
pplt03009
]
Eukaryotic type
90S particles
Helicases
128457274 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
128457274
NCBI-ProteinID:
XP_053297879
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All DBs
Position
15:11933211..11940124
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AA seq
665 aa
AA seq
DB search
MDAFDLFRKLGAGAKFDLKRFGQDANRFKVVKPQGGEASIDPLSAIDYFGAGLANGAQSS
PTELEEHGEEDEKESDSGDSSAGVKRQREEEEEKSLRTKKKKKKKTKINQVEAGATEGGG
ITWTSSQERKILNLPTDAKEKNSMKRLKHLHQQKVNHIRSQHRINVHGCDVPDPVSTFDE
LQSEYRLHTCVLQNLKDAGLNSPTPIQMQAIPLMMHGRELLACAPTGSGKTLAFCLPLLA
QLQQPANLGFRAVVISPTRELASQTYRELLRLSEGIGFRVHIIDKASLAAKKYGSQSNKK
YDILVSTPNRLVFLLNQDPPALDLSSVEWLVVDESDKLFEGGKTGFREQLATVFLACSGS
KVRRAFFSATCTPDVEQWCRLNLDNLVSVNIGHRNSAVETVDQQLLFVGTENGKLVAMRD
IIKKGFLPPMLVFVQSIDRARELFHELVYEGINVDVIHADRTQQQRDNVVSSFRSGKIWV
LICTALLARGIDFKGVNLVLNYDFPTSAVEYIHRIGRTGRAGHQGKAMTFFTEDDKPLLR
SIANVIKQAGCPVPDYMIGFKKIHSKDKRKLEKRPPKRSTICTTPRFLMKKTGKEQGQKE
QKRAADGEQKGEKKTKGLKVKKRNETQKERGPKKQSRTSQKMGSNSPAAKFKNRKGGKKT
KPQKE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttcgatttgtttcggaaactcggagctggagctaagtttgacctgaaaagg
tttggacaggacgcgaaccggttcaaggttgtcaaacctcagggaggagaagcttccata
gatcccctctctgccattgattacttcggcgcaggcctggccaatggagcgcagagcagc
cccacagagctggaggagcatggagaggaggatgagaaagaaagtgacagtggagattct
tctgcaggagtcaaaagacagagagaggaagaagaagagaagagcctgaggacaaagaag
aagaagaagaaaaagacgaaaattaaccaggtggaagctggggccacagagggaggtggc
atcacctggacgtcctcacaggaaagaaagatcctgaatttgccgaccgacgcgaaggag
aaaaactctatgaagaggctgaaacaccttcatcagcaaaaggtgaaccatattcgctcc
cagcaccgtataaacgtccacggctgcgatgtgcccgacccagtgtccacatttgacgag
ctgcagtccgagtatcgtctccacacatgtgtccttcagaacctcaaagacgcagggttg
aattccccaacgccaatacagatgcaggcgataccgctcatgatgcatggtcgggagctc
ctggcctgcgctcccactggatcagggaagacgttggctttctgtctcccgctgctcgca
cagctgcagcagccggccaacctgggcttcagagcggtggttatctccccgaccagagag
ctggccagccagacctacagagagctgctccgtctgtcagagggaatcggatttcgagtt
cacattattgacaaagcctctctggcagcgaagaaatatggatcacagtcaaacaaaaaa
tatgacatactcgtgagtactccgaacagactcgtcttccttctcaatcaggatcctcca
gctctcgacctcagcagtgtggagtggctggtggtggacgagtcagacaagctgtttgaa
gggggtaagaccggctttagggaacagctggccacagtgtttctggcctgctcggggtca
aaggtgcgcagggcgttcttcagcgccacctgcacaccggatgttgagcagtggtgtcgt
ctgaacctcgacaacctggtgtcggtcaacatcggacacagaaattcagcagtggagacg
gtggaccagcagctgctgtttgtgggcacagagaacggcaaactggtcgccatgagggac
atcatcaaaaaaggtttccttcctcccatgctggtgtttgttcagtctatagatcgagca
cgcgagcttttccatgagctggtgtatgaaggcatcaacgtagatgtgatccacgcagac
cgcacacagcagcagagggacaatgtggtgagcagtttccgctccggtaagatttgggtg
ttgatctgcacggcgctgctcgccagaggaatcgacttcaaaggggtcaacctcgtgctg
aactacgacttccccaccagcgctgtggaatacatccaccgtattggtcgaacaggccga
gctggacatcaggggaaggccatgaccttcttcacagaagatgacaaaccactgctccga
agcatcgctaatgtcattaaacaagctggctgtcctgtgcccgattacatgatcggcttt
aagaagattcacagcaaagataagcgcaaacttgagaagaggcctccaaagagaagcacc
atttgcacaacccctcgtttcttaatgaagaaaacgggcaaagaacaaggacagaaagaa
cagaagagagcagcggatggagagcagaaaggagaaaagaagaccaaaggactgaaagtg
aagaaaagaaatgaaactcaaaaagaaaggggaccaaaaaaacaaagcaggacgtcacag
aagatgggatcaaattcccccgcggctaagtttaagaacaggaaaggaggaaagaagact
aagccacaaaaggaatag
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