Pleuronectes platessa (European plaice): 128457521
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Entry
128457521 CDS
T09923
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128457521 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pplt04040
]
128457521 (trpv1)
Ion channels [BR:
pplt04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128457521 (trpv1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_5
Ion_trans
Ank_4
Motif
Other DBs
NCBI-GeneID:
128457521
NCBI-ProteinID:
XP_053298225
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Position
15:18660107..18672110
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AA seq
780 aa
AA seq
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MKKSEMFGFSLETDDRTEEEKSRHTAANRNGKEAPKAPMDTDYQEEMEETKPKLRFNLNF
DKAIRGIEPDNRKRESQTFDIERLFEAVASRDVRKLDGLHQYLYQNMKKLSDSLYQSYGK
TPLMKALLHLRDGKNETVELLIEISERLGDIKEFVNAAYTSSYYKGQTALHIAIERRSIS
YVKLLVSKGADVHAKACGKFFRPHDSPYFYFGELPLSLAACTNQADVVDFLMENEYEQAN
AKLADSQGNTVLHALVVIADNSIENTDFITNIYDSILKTTARLHPKLKLEDIENHQGLTP
LKMAAKTGKIGLFAHILKREFQESHTKHLSRKFTEWVYGPVNCSLYDLATLDSCEEASVL
EILIRGSDIPNRHKMLETEPLNRMLDEKWKKFAGPLFFVNFLFYLLYLIIFTLVGYNKKE
LKLPFHLEHNLNGYLYVSGQLLLLLANIYFFLGGIIDMCRKRPKLQTLMIDGYYEILFFL
QGFLFITSAGLYVCGQQAYLGFMVLCLALSWVNLLYYSRGDRHMGIYSVMIQKMILSDIL
RFLFVYVVFLFGFSAAVVSLLIDPSVKNKTETVIIGKGRFIGPLDADEECLKPSYSNITY
TTLQLFKFTIGMGDMEFMQDSQNTEVFYMLLISYIILTYILLFNMLIALMNRTVERIQMQ
SSSIWKLQRSITILDMEKRLPGFVRRRFRCGVEKKLGTALGDDRRRCFRVEEVNWNKWNI
NLGKINEDPGCWDRLHQPTPDTPLHRPNRGRSWRGLFRDGSRRLQTHQSTEMSPLSSQPV
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcagagatgtttggcttctccctggaaacagacgacaggacggaggaggag
aaatcgcggcatacagcagcaaataggaatggcaaggaggccccaaaggcaccaatggac
actgactaccaggaagaaatggaggagacaaagccgaaactcagattcaatctcaacttt
gacaaagcgattcgaggtatagagccggacaaccggaagagagagagtcaaacatttgac
attgaaaggctgtttgaagcagtggccagccgggacgtcagaaagctggacggcctgcac
cagtacctgtaccaaaacatgaagaaactgtccgactccctctatcagtcgtatggcaaa
acccccctcatgaaggctctcctgcacctccgcgatggcaagaacgagactgtggaatta
ttaattgagatttccgagaggctgggcgacattaaagagtttgtgaatgcagcctacacc
agcagctattacaaaggtcagacagctctccatatagccatcgagaggaggagtatttcc
tatgtgaaactactggtcagtaaaggagcagatgtccacgccaaagcctgtggaaaattc
ttccggccacatgacagcccctacttttacttcggtgagctgcctctgtctctggccgct
tgcaccaaccaggctgacgtggtggacttcctgatggagaacgagtacgagcaggcgaac
gcaaagctggcagattctcagggtaacacagtactgcatgctctggtggtgattgcggac
aactccattgagaacacagacttcatcaccaacatatacgacagcatcctcaagaccact
gcccgactgcatccgaagctgaagctggaagacatcgagaaccaccaggggctaacgcct
ctcaaaatggcggccaagactggaaagatagggctttttgcccacatcctgaaacgggaa
ttccaagagagccacaccaaacatttgtcccgtaaattcaccgaatgggtttacgggccg
gtcaactgctccctgtatgacctggccacgttggattcgtgcgaggaagcctcagtcttg
gagatactaatccgcggcagcgacattcctaaccgtcacaagatgcttgagacggaacct
ctgaaccgaatgctggatgagaagtggaagaagtttgccggtcccctgtttttcgtcaac
tttctgttctaccttctgtacctgatcatattcactcttgtgggttacaataagaaagag
ttaaagcttccgtttcacctggaacacaacttgaacggttacctgtacgtttcaggccag
ctgctgttactactggcgaacatctatttctttttaggagggataattgacatgtgcagg
aagcgaccaaagctgcagacgttgatgatagatggatattatgagattctttttttcttg
cagggcttcctcttcataacctcggccgggctgtacgtgtgcgggcagcaggcatacctg
ggcttcatggtgctgtgtctcgccctgagctgggtgaacctgctctactattccagggga
gacagacacatgggcatctacagtgtcatgatacagaagatgatcctcagtgacatcctg
cgatttctttttgtctatgtcgtcttcctctttggattttctgcagccgtggtctccctg
ctcatagacccttctgtaaaaaacaaaaccgaaactgtaataattggtaaggggcgtttc
attggtcccctcgatgctgatgaggagtgcctgaaacccagctactccaacatcacctac
accacgctgcagctcttcaagttcaccatcggcatgggcgacatggagttcatgcaggac
tcccaaaacacggaggtcttctacatgctcctcatctcctacatcattctcacctacatc
ctgctgttcaacatgctcatcgccctcatgaaccgcaccgtagagaggatccaaatgcag
agcagcagcatctggaagttgcagaggtccatcaccatcctggacatggagaaaaggctg
cctggtttcgtgaggagaaggtttcgctgcggggtggagaagaaactgggcacggctctt
ggagatgatcgtcgccggtgtttcagagtggaggaagtcaactggaacaaatggaacatc
aacctgggcaaaatcaatgaggatcccggctgctgggatcgtttacaccagcccacacca
gacactccgctgcacagaccaaacagagggaggagctggagaggcttattcagggatggc
agtaggcgattgcagacacatcagtccacagagatgagtcctcttagcagccaaccggtc
tga
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