Pleuronectes platessa (European plaice): 128458029
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Entry
128458029 CDS
T09923
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128458029
03036 Chromosome and associated proteins [BR:
pplt03036
]
128458029
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128458029
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Gene silencing
piRNA pathway
128458029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
RRM_1
UBA
RRM_occluded
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
128458029
NCBI-ProteinID:
XP_053298599
LinkDB
All DBs
Position
16:17851381..17887755
Genome browser
AA seq
1839 aa
AA seq
DB search
MEDKKKKKQEEKKKKEAAQKKATEQITKVPDSAKLDPAPPLPPINPSAAPSVAPSSGNGK
RAPSGGQPQTAQQPQTLLQQRYPPREVPPRFRQQEHKQLLKRGQPLPSGSLLLTATTRPS
TTEPAAAAVPANSSPSCSSSSTASLPTELPPQSSQGAQYDNPLWGHLPTNRSATSAASST
NLSGWDQLSINQKDTEAWSSITLSKSQAPPGGCPLDTDPGRLTSTSSSSSSSGSSSSTSS
SCSTVTMATGANSQTGHFPANLSSKANSGTSPASHTGTSMLSNQVAANRSWGSGPGPSHC
PPQSSAGNEVKSDSPVGGAGSRGWGSSSSTTNYNLNLNPNANPSAWPMLGHDGPGTGGGS
SGGANTISPPQPTPNLCNQPGPPPAQTSTCTGANTNSNSSGIGSAWGGLMTSDMSEPHPS
PSTNVSFSSEPQNLKTDGPNHTNKQEPSSPIHSLPGWGNAPVGMSSMGQPPKGGPQVNGE
DSSSVWGNSGDSKAPSSKEAPGWNSGWGHGGGGAGNTGGWGDQSRGDWGKQHTEEAQGSW
DTPSSPPQETKASPWGRAVSTAVASEGSSDSMEGHPPCRDSSRDNPAPLPPAQDLDPRVL
CNTGWGQTPVRQHTSWDMVESKRKKDAATESRGSGPTTPNNSQGPSNTSMGPTQRSDPGS
KNDVPGSQGASGWGGSIAATNKPNSGWGEPPNNIKPPAAPSGWGNSPAGGPTTSVPKNGG
QSWREEKPSGWDDAHIKATSQGWGEQQKASHGWGNSGGSNNTGDWGEPEESKKSPTNPAW
EGEAAGWKEKPRGWGMPASGSGISGAGGNGGWAEPVSQRPSGPPQGWAGKPQDGPSGNSG
GGGVGSWGGSNSVKQAAGRSGSKQESSADPTGWEEPSPPSIRRKMEIDDGTSAWGDPGVY
NKAVNLWDKNNPGNSQAKVPTGGNNPPVPNNNHHHSQNHPYHGPPAPLQNHSQNSLNPGP
TSGPMDPVVPHQPGPSHNRAPLITQGWGEIPSSHTKSESTWGEPAPPPVSMDNGTSAWNK
QTGSCGGWSEGNQDSYGRGNPAMTSASCKPAPKPMQDGWGGGGGGEELSLSGGQWDAEEG
DMWNTAPSQESNSSCNSWGNTSKKVPQKVKVPGKQEEAWIMNRLIKQLTDMGFPRDPAEE
ALKSNNLNLDQAMSALLEKKTELDKRGMGMAGHDYNNGLINKPMSCPRPPLLSKDPSADP
RMPFMDKQMQSGMFGGGGAAQARTMQQTQQPPQPPVPPLSSSQPSVRAQVPQFLSPQVQA
QLLQFAAKNIGLNPALLTSPINPQHMTLLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPIR
QQEQQVARTINNMQQQIQQHQRQLAQALLMKHQQQQPPPSHSGLHPGGTKSPLDSFPGHP
HAPGLPDLQTKELHSSPNTYSPYSLSGLNPNMNVNCMEVGSLAMKEPHQPQSRLSQWTHP
NSIESLSGNSSLLEPSLGKHGANLGPPGKPPQLEDSYSPYNLMSSSDSPTSPLVPADNWG
QGKSNNDKMANGTNINWPPEFCPGVPWKGLQNIDPENDPNMTPGSVPSGPTINTNIQDVN
RYLLRDRSGGKLSEMKSTWSSGPVSHSQASLSHELWKVPQGPRSSNIAPSRPPPGLTHSK
PSSTWGGNSLGLAQGWSSSYTSAGTTWSTDSSTRTSSWLVLRNLTPQIDGSTLRTLCMQH
GPLITFHLNLTQGNAVVRYSSKDEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFFAQGQ
SLGVTTSWQATPGSNQTRMGGTGSGAPHPIGHSPHWNNNNNGSGGLGGGAKTGGELLWGG
VPQYSNLWGPPSGEDGRIMGSPTPINTLLPGDLLSGESM
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggaagataagaaaaagaaaaagcaagaagagaagaaaaagaaagaagccgctcagaaa
aaggccacagaacagataaccaaagtgccagactctgccaagctcgatcccgcccctcct
cttccccccatcaaccccagtgccgccccgtctgtagccccaagcagtggcaatggcaag
cgcgctccctccggaggtcagccacagacagcacaacagccccagactctgctccagcag
cgctacccacccagagaggtgccccctcgcttccgccagcaggagcacaagcagctgttg
aagaggggtcagcctctgccctctggaagcctgcttctcaccgccacaacacgtcccagc
actactgaacctgcagcagcagctgtacccgcaaactcctctccctcctgctcctcttcc
tccacagccagcctgcctacagaactgcccccccagagcagccagggagcccagtatgat
aatcccctctggggacacctgccaactaataggagtgccacaagtgctgcctcttccacc
aatctcagtggttgggaccaactgagtattaaccagaaggacacagaggcttggtcttcg
attaccctcagcaagagccaggcccctcctggaggatgccctttggatactgaccctggt
cgcttgaccagcaccagcagcagcagcagcagcagcggcagcagcagcagtactagtagt
agttgtagtacagttactatggccacaggggccaacagccagacaggccacttccctgcc
aaccttagcagcaaggccaacagtggaaccagtcctgccagtcatactggaaccagcatg
ctctctaaccaggttgcagccaatcgcagctggggttctggacctggaccctcccattgc
ccccctcagtcctcagcggggaatgaagtaaagagtgacagtccagtggggggagcaggc
agcaggggctggggctcatcatcttccaccaccaactataacttgaacctaaaccctaat
gccaacccatctgcctggccaatgctggggcatgatggacctggtacagggggaggcagc
tcagggggagccaacaccatttcacctcctcaacctacaccaaacctctgtaatcagcct
ggccctccaccagcccagaccagcacctgtactggagccaacactaacagcaactcctct
gggattggcagcgcctggggaggtttaatgacctctgacatgtcagagccacacccctcc
ccatccacgaatgtgtctttcagttcagaacctcagaaccttaaaactgatggaccaaat
cacactaataagcaggaaccgtcaagccctatacacagcctgcctggctggggtaatgca
cctgtagggatgagttcaatgggccaacctccaaaagggggcccgcaggtcaatggagaa
gatagtagctcagtatggggtaacagtggcgactctaaggcaccttcatctaaggaggca
cctggctggaactctggctggggccatggaggaggtggagcagggaatactggaggatgg
ggtgaccagtcccgtggagactgggggaaacagcacactgaagaggcccagggaagctgg
gataccccaagctctcctccgcaggagacaaaggctagtccttggggcagagctgtgagc
acagctgttgccagtgaagggagcagtgacagcatggaaggacatcccccatgcagagac
tcatccagagataatccagctcctctgccccctgcacaggatctggaccccagggtgttg
tgtaacactgggtggggacagacccctgttcgccagcacacctcgtgggatatggttgag
agtaaacgcaagaaagatgcagccactgaatcacggggctctggcccaaccactccaaac
aattcccaggggccctccaacactagcatgggccccactcagaggagtgaccctgggagc
aaaaatgatgtgcctggttctcagggagcttcaggttggggtggaagcatagcagctacc
aacaagcccaactctggttggggagagccacctaacaacattaagcccccagctgccccc
agtggctgggggaactctccagcaggaggccccaccaccagtgtacctaagaatggtggt
cagtcatggagagaggagaagccaagtgggtgggacgatgctcacatcaaggcaacatcc
caaggctggggagagcaacaaaaagcctcccacggctggggcaatagtggaggcagcaat
aacactggtgattggggagaaccagaagagagcaaaaaaagtcccaccaaccctgcctgg
gaaggcgaggcagcaggctggaaggaaaagccacgaggctggggaatgccagcttcagga
tcagggatatctggagctggaggaaatggtggctgggcagaaccagtttcccagcgaccc
agtggccctcctcaaggatgggctggcaagcctcaggatgggcccagtggtaatagtgga
ggagggggcgtaggctcttggggtggctcaaactcagtgaagcaagctgcaggtcggagt
ggcagtaagcaggaatcctcagctgatcctacaggctgggaagagccctccccaccttca
atccgacggaaaatggagatagatgatgggacctcagcttggggtgaccctggtgtctac
aacaaggctgtcaacttgtgggacaagaataatccaggaaattcccaggctaaagttccc
actggaggcaataatcccccagttccaaacaacaaccatcaccactctcagaatcaccca
tatcacgggccacctgcacctttacagaatcacagtcaaaattctctaaacccagggccc
accagtgggccaatggaccctgttgtgccacaccagcctgggccatctcataacagggct
cccctgataactcaaggctggggagaaataccaagctcccacacaaagtcggagagcact
tggggggaacctgcacctcctccggtcagcatggacaatgggacgtctgcctggaacaaa
caaactggtagctgtggaggctggagtgagggtaaccaggacagctatggcaggggcaac
ccagcaatgacatctgcatcttgcaaacctgcccccaaacctatgcaagacggatgggga
ggtggaggtggaggtgaggagctgagcctgtcagggggtcagtgggatgctgaggaggga
gacatgtggaatactgctccctcccaggagagcaactcctcctgcaactcttggggcaat
acatccaaaaaggtcccacagaaggtgaaggtcccaggaaagcaagaagaggcctggatc
atgaatcgtctcatcaaacagttgacagacatgggcttccctagggatccagcagaggag
gctctgaagagcaacaacttgaacctagaccaggccatgagtgccctgctggagaagaag
acggagctggacaagcgggggatggggatggccggacacgactacaacaacgggctcatc
aacaagcccatgagctgccctcggcccccgcttctttccaaagacccctccgcagacccc
cgcatgcccttcatggataagcagatgcagagtggaatgtttggcggcggtggagcagca
caagcccggaccatgcagcagacgcagcagcctcctcagccgccagtgccgcctctcagc
tcctctcagcctagtgtacgtgctcaagtgcctcagtttctctcccctcaggttcaagca
cagctcttacagtttgcagcaaaaaacattggtctcaatcctgcacttttaacctcacca
ataaaccctcaacatatgacccttctgaatcaactttaccagctgcaactggcataccag
cgtttacaaattcagcagcagatgttgcaggcgcagcgcaatgtttctggtcccattcga
caacaagagcagcaagttgcacgtacaatcaataacatgcagcagcagatccaacagcac
cagcgtcagctggcccaggccctgctgatgaagcatcagcaacagcagccgcctccctcc
cactcgggcctgcatcctggtgggaccaaatcccccctggattcatttccaggtcacccc
cacgctccaggcctccctgacctgcagaccaaagagctgcactcatctcctaacacctac
agcccctactctctctccggactgaatccaaacatgaatgtaaactgtatggaggtggga
agtctggctatgaaggaaccccaccaaccccaatcgcgcctgtcgcagtggacgcacccg
aactccatcgaaagcctttctggtaactcctctcttctagagcccagcctgggcaagcat
ggtgccaacttgggtcccccgggtaaacccccacagctggaggactcttacagtccctac
aacctcatgtccagctcagactctcctaccagccccctggtccccgcagacaattgggga
cagggcaaaagtaacaatgacaagatggccaatgggaccaatatcaactggccgccagag
ttctgccccggtgttccctggaagggtctgcagaatatcgaccctgagaatgaccccaac
atgacccctggcagtgtccccagtgggcccaccatcaacaccaatatccaagatgtcaac
cgctacttgctacgggacaggagtggaggaaaactgtcagagatgaaatctacctggtct
tctggccctgtctctcatagccaggcctccttgtcccacgagctgtggaaggtccctcag
gggccccggagcagcaatatagccccttcacgtcccccacctggcctcacccacagcaag
ccttcctcaacgtgggggggcaactccctgggtctggcccaaggctggagcagctcttac
acctcagcaggtaccacgtggagtacagacagctccaccaggaccagtagctggctggtt
ttgaggaacctcactccacagattgatggttcgacactgcgtacactgtgcatgcagcac
ggccccctcatcacattccacctcaacctaacacagggcaacgctgtggtgcgctacagc
tccaaggatgaggctgccaaggctcagaagtccctgcacatgtgcgtgctcgggaacacc
accatcctggcagagtttgctggggaggaggaagtgaaccgcttctttgcacagggccag
tcgctcggcgtaacaaccagctggcaggccactccaggctccaatcagacaaggatgggt
gggaccgggtccggagcccctcatcctatcggtcactcgccccactggaacaacaacaac
aacggcagcggtggccttggaggcggagcaaagacaggcggggagttgctttggggtggc
gtgccacagtattctaacctgtggggacccccaagtggagaggatggacggatcatgggg
agtcccacaccaatcaatacgctgctgcctggggacctgctgagtggagagtccatgtag
DBGET
integrated database retrieval system
